KEGG   Xenopus laevis (African clawed frog): 108708457
Entry
108708457         CDS       T01010                                 
Symbol
sox1.L
Name
(RefSeq) transcription factor Sox-1
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    108708457 (sox1.L)
Transcription factors [BR:xla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    108708457 (sox1.L)
SSDB
Motif
Pfam: HMG_box SOXp HMG_box_2
Other DBs
NCBI-GeneID: 108708457
NCBI-ProteinID: XP_018102680
Xenbase: XB-GENE-17344858
UniProt: A0A974HYT5 A0A1L8HH00
LinkDB
Position
2L:complement(121175987..121178847)
AA seq 400 aa
MYSMMMETDLHSPGVQPPSNTGQAGGGGGNKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLHAAGGGHMGVGLSPGGGGGGGGVVVQRLESPGSGASTGGYAHMNGWANGAYP
GSVAAAAAAAMMQEAQLAYSQQQQQHPGSGGHHPHHHPHHPHHHPHHHPHHNPGPHSAPP
PPQPMHRYDMSALQYSPLPGAQTYMSASPSSYGALSYSSSQQQHQGSPSSAAVAAAAAAA
AAAAASSGALGALGSLVKSEPSVSPPVSGGGSHNRPPCPGDLREMISMYLPTGGEVGDPA
AAAAAAAAAAAAATSRLHSLPQHYQGAGTGVTGTMPLTHI
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtacagcatgatgatggagacggacttacactcccccggggtgcagccccctagcaac
acagggcaagccgggggaggcgggggaaataaagccaaccaggaccgggtcaagagacca
atgaacgcctttatggtatggtccagaggccagaggaggaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagaggctgggggccgagtggaaagttatgtcggag
gctgagaagagaccctttattgacgaggccaagagactgcgcgccctgcacatgaaggaa
cacccggattataagtaccggccgaggcgcaaaaccaagaccctgctgaagaaggacaag
tactctctagctggggggctgctgcacgcggctggaggaggccacatgggggtcggcctg
agtccaggtggtggtggaggagggggaggggtggtggtacagcgtctggagagtcccggc
tcaggcgcatctacaggcgggtacgctcatatgaacggctgggccaacggtgcttacccg
ggctctgtggccgctgctgccgctgctgcaatgatgcaggaggctcaacttgcttacagt
caacagcagcaacagcacccaggcagcgggggacaccacccgcaccatcacccccaccat
cctcaccatcacccgcatcaccatccgcaccacaaccccgggccacactcggcgccccct
ccgccccagcccatgcaccgttacgacatgagcgccctgcagtacagcccgctgcccgga
gcccagacctatatgagcgcatctccctccagctacggggctctgagctacagctccagc
caacagcagcaccagggctctccgtcttctgccgcagtggcggcggctgcagctgctgcg
gctgccgcagccgcatcatcaggtgccctaggggcactgggatccctggtgaaatccgaa
cccagcgtcagtcccccagtaagtggaggaggctcccacaaccggccgccatgtcccgga
gatctgcgggagatgatcagcatgtacttgcctactgggggggaagtcggggatccggca
gctgctgcagcagcggcagcagcggcggcggcagcggcaactagcagacttcacagccta
ccccaacactaccagggggcaggcacgggggtaaccggcaccatgccactgacacacatc
tga

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