Xenopus laevis (African clawed frog): 108708457
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Entry
108708457 CDS
T01010
Symbol
sox1.L
Name
(RefSeq) transcription factor Sox-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108708457 (sox1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108708457 (sox1.L)
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Motif
Pfam:
HMG_box
SOXp
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108708457
NCBI-ProteinID:
XP_018102680
Xenbase:
XB-GENE-17344858
UniProt:
A0A974HYT5
A0A1L8HH00
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Position
2L:complement(121175987..121178847)
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AA seq
400 aa
AA seq
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MYSMMMETDLHSPGVQPPSNTGQAGGGGGNKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLHAAGGGHMGVGLSPGGGGGGGGVVVQRLESPGSGASTGGYAHMNGWANGAYP
GSVAAAAAAAMMQEAQLAYSQQQQQHPGSGGHHPHHHPHHPHHHPHHHPHHNPGPHSAPP
PPQPMHRYDMSALQYSPLPGAQTYMSASPSSYGALSYSSSQQQHQGSPSSAAVAAAAAAA
AAAAASSGALGALGSLVKSEPSVSPPVSGGGSHNRPPCPGDLREMISMYLPTGGEVGDPA
AAAAAAAAAAAAATSRLHSLPQHYQGAGTGVTGTMPLTHI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttacactcccccggggtgcagccccctagcaac
acagggcaagccgggggaggcgggggaaataaagccaaccaggaccgggtcaagagacca
atgaacgcctttatggtatggtccagaggccagaggaggaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagaggctgggggccgagtggaaagttatgtcggag
gctgagaagagaccctttattgacgaggccaagagactgcgcgccctgcacatgaaggaa
cacccggattataagtaccggccgaggcgcaaaaccaagaccctgctgaagaaggacaag
tactctctagctggggggctgctgcacgcggctggaggaggccacatgggggtcggcctg
agtccaggtggtggtggaggagggggaggggtggtggtacagcgtctggagagtcccggc
tcaggcgcatctacaggcgggtacgctcatatgaacggctgggccaacggtgcttacccg
ggctctgtggccgctgctgccgctgctgcaatgatgcaggaggctcaacttgcttacagt
caacagcagcaacagcacccaggcagcgggggacaccacccgcaccatcacccccaccat
cctcaccatcacccgcatcaccatccgcaccacaaccccgggccacactcggcgccccct
ccgccccagcccatgcaccgttacgacatgagcgccctgcagtacagcccgctgcccgga
gcccagacctatatgagcgcatctccctccagctacggggctctgagctacagctccagc
caacagcagcaccagggctctccgtcttctgccgcagtggcggcggctgcagctgctgcg
gctgccgcagccgcatcatcaggtgccctaggggcactgggatccctggtgaaatccgaa
cccagcgtcagtcccccagtaagtggaggaggctcccacaaccggccgccatgtcccgga
gatctgcgggagatgatcagcatgtacttgcctactgggggggaagtcggggatccggca
gctgctgcagcagcggcagcagcggcggcggcagcggcaactagcagacttcacagccta
ccccaacactaccagggggcaggcacgggggtaaccggcaccatgccactgacacacatc
tga
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