Xenopus laevis (African clawed frog): 108708509
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Entry
108708509 CDS
T01010
Symbol
pcdh20.L
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108708509 (pcdh20.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108708509 (pcdh20.L)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108708509 (pcdh20.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108708509 (pcdh20.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Protocadherins
108708509 (pcdh20.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
108708509
NCBI-ProteinID:
XP_018102784
Xenbase:
XB-GENE-17337398
UniProt:
A0A1L8HHN3
A0A974DR01
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Position
2L:135609442..135614913
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AA seq
897 aa
AA seq
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MGQPSSCRNPLRIILQTAQHLLFLWLLAHVRGSLFSSASNSRATELLYTLQEGLPKGVHI
GSIGDDLQLDFFADPPLSFSLASKGPSEKYVSLNNSTGELSTSSEELDREALCPHSLVAQ
ECVLLLDVIILPQEYFRLIKVKIAIIDINDNAPHFPVPQIYISVPENAPVNTRIVIEHPA
YDPDGGTNGVQTYRLVDYHGVFTLDVEENESGERTPYLIIMGPLDREMKAEYETTIIAED
GGIPPLIGSATLSILISDVNDNCPLFNASQINATLYGNSTKGTHVATVHAVDTDLGPNAL
ITYAFSERVPQAAKEYFHLDEMKGIIKLSKRIDGSTVQQHKLTILANGPGCIPAVITVFI
SINKVTFRPPELVPRYIANEENGVIYLKELEPVHSPIAFFTIKDPDEKYQVDCYLEGKGP
FRLSAYKPYNNEYLLETTDVLDYELRQSYNIAVVALSWDGYPVKKLLKVQILDENDNSPI
FTESAVEITIEENNEPNAFLAKLYATDADSDESGQISYFLGPDAPSYFSIDSVTGILSVS
TILDREEKEKYRFTVRARDAGFPSRESVATVYITVLDKNDNNPRFISKDFSFFVPENFLR
FGEIGVISVTDADSGQNGWIALSIVNGSDIFVIDNGKGLLRAKVSLDREQQSSYALWVEA
VDGGDPTLSSTAKITILLLDVNDNPPVVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDT
GMNAVIAYSIIGRRGPKPESFRIDPITGNITLEEALMRNDCGLYRLLVKVSDHGYPEPLF
STVMVNLFVNDSVTDESYIETLLRKEPDINIEEKEPQIAMEPSQKEMESDSCTPTLVTLS
IICLGSVILVTLMGMYICLRKGKNDHGINENTEVQIPLNRKIDFHMLEKRPIEISNI
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcccagcagctgcagaaacccgctcaggatcattctccaaactgctcagcac
ttgttgtttctgtggctgctcgctcacgtcaggggatctctcttcagctcggcgagtaac
agcagggccacggaattgctttacacgctgcaagaaggcttgcctaagggagttcatatc
ggaagcattggggacgatctgcagctggatttctttgctgatcctcctctgtcgttcagc
ctggcttcaaaggggccgagtgagaagtatgtgagtctcaataacagcacaggcgagctg
agcacatcatctgaggagcttgacagggaagctctctgcccgcattcgctggttgctcag
gagtgtgtgctgcttcttgatgtaatcattttgcctcaggaatatttcagacttatcaaa
gttaagattgccatcattgacatcaacgacaatgctccacatttccctgtgccacagatt
tatatttcagtcccagaaaatgcccctgttaacaccaggatagttatagagcaccctgcc
tatgaccctgatggtgggacgaacggggtccagacctacaggttggtagattaccatggt
gtctttacacttgatgttgaggaaaacgaaagtggggagaggactccctaccttattatc
atgggcccactggatagagaaatgaaagctgagtatgaaaccactatcattgcagaagac
gggggaattcctccactcatagggtctgccacgctgtcaatactgattagcgatgtaaat
gataactgccccctattcaatgcatctcagatcaatgcaactttgtatggaaattccacc
aaagggacacacgttgctacagtgcatgcagtggatacagacttaggtcctaatgccctg
attacatatgcattcagtgaaagggtgccacaggcagcaaaggaatactttcacctggat
gagatgaaagggattataaaactttcaaagagaatagacggaagcaccgtccagcagcat
aaattaacaatacttgccaatggtccgggctgcattccagctgtgattactgtattcatt
tccataaataaagtcactttcaggcccccggagctcgtacctcgatatattgctaatgag
gaaaatggtgttatttacctgaaggaattggagcctgtccattctccaattgcatttttt
accataaaagacccagatgaaaaatatcaagtggattgttacctagaaggaaaagggcct
tttagactttctgcatacaagccatataataatgagtatttgctagaaactacagatgta
ctagattatgagctcagacagtcctacaacatagcagtggttgcacttagctgggatggg
tatccggtaaagaagcttctaaaagtccaaattctggatgagaatgataattcccctatt
ttcacagaatctgctgtagagataactattgaagaaaacaatgagcccaacgcatttctg
gcaaaactttatgccacggatgctgacagtgatgagagtggtcaaatatcttattttcta
gggcctgatgcaccttcctatttttctatagatagcgtgacaggcattctttcagtttct
accatattggaccgagaagaaaaagaaaaataccggtttacagtcagagcaagagatgct
ggctttccttcaagggaatctgttgctacggtttacatcacggtgctggataaaaatgat
aataatcctcgttttatcagcaaagatttcagtttttttgtgcctgaaaattttctgaga
ttcggtgaaattggagtgattagtgtcactgatgctgactctgggcagaatggatggata
gctctatctatagtgaatggaagtgatatttttgtcattgacaatggcaaaggactcttg
agggcaaaggtttctctggacagagagcaacagagctcatatgctctttgggttgaagct
gttgatggtggggacccaaccttgtcttctacagctaaaattacaatcttgcttttggat
gttaatgataacccaccagtggtcctcttccctcagtccaatatgtcgtatcttcttgtt
cttccttccaccctgccaggttcacctgtcacagaagtttatgctgttgataaagataca
ggtatgaatgccgttattgcctacagcatcataggtcgaaggggacccaaaccagaatca
tttaggatagaccccataacaggcaacatcactttggaggaggcacttatgaggaatgac
tgtggattgtacaggttattagtaaaagttagcgaccatggctacccagaaccactcttt
tccacagtaatggtaaatctctttgttaatgacagtgtcacagatgaaagttatattgaa
accttgctgagaaaggagccagatatcaatatagaagaaaaagagccacagatagcaatg
gagccctcccagaaagagatggaaagtgattcatgcacccctacattggtaactctgtca
attatttgcctggggtctgtcattttggtaactctgatggggatgtacatctgcttaaga
aaaggtaaaaatgatcacggaataaatgagaacacagaagttcaaataccattaaacagg
aaaatagacttccatatgctggaaaaaaggccaatagagatttctaacatttaa
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