Xenopus laevis (African clawed frog): 108708560
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Entry
108708560 CDS
T01010
Symbol
itga7.L
Name
(RefSeq) integrin alpha-7 isoform X2
KO
K06583
integrin alpha 7
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
xla04810
Regulation of actin cytoskeleton
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108708560 (itga7.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108708560 (itga7.L)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108708560 (itga7.L)
04810 Regulation of actin cytoskeleton
108708560 (itga7.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108708560 (itga7.L)
04515 Cell adhesion molecules [BR:
xla04515
]
108708560 (itga7.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108708560 (itga7.L)
Cell adhesion molecules [BR:
xla04515
]
Integrins
Integrin alpha subunits
108708560 (itga7.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
LYRIC
CdsD_PD2
Motif
Other DBs
NCBI-GeneID:
108708560
NCBI-ProteinID:
XP_018102877
Xenbase:
XB-GENE-6486688
UniProt:
A0A8J0UJ58
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All DBs
Position
2L:complement(143727892..143827312)
Genome browser
AA seq
1111 aa
AA seq
DB search
MPAELGAPLCLSCLLLLAVLRVQAFNLDVTNTLTKDGEKGSLFGLSVALHRQLNPDPMSW
LLVGAPQASALPNQNANRTGGLYGCPLTTEPKDCIRLDIDHGVDASRESKENQWLGVTVK
SQGPGGKIVTCAHLYETRQRVNQLSETRDVIGRCFVLSEGLTISEDLDGGEWKFCEGRAL
GHEMFGFCQQGISAGFTTDNHYIMFGAPGTYNWKGELRVELFNQSALALGTYDDGPYEVA
GEKSQKPEMIPVPHHSYFGFSVDSGWGVTGRNSLSFVSGAPRANHTGAVVILQRDNGSQL
IPELILWGETLASSFGYSVAIEDLNNDGWMDLLVGAPNFFSRKEEIGGAVYVYMNQAGKL
DKSPPIRLNGSDGSMFGIAIGSLGDINQDGFKDVAIGAPYDGNGKVYIYHGSSKGLVTKP
AQILDGISVGIKTFGYSLSGGLDVDGNSYPDLLVGSLSDTVVLFRSRNVIHVLKEVIITP
QNIDLENENCKHGTGICVELRACFSYIAVPANYNPRMTLKCVLEAEADRRLQGKSSRVIF
LKRHSSDLEYQHTSTVELHKQSARHCTTATFQLQEGIKDKLRSIPVTLTYNIHNAHLRGQ
PSADLLPPLMPVLSDVERNVYTTEVNFLKEGCGEDKICQSNLQLSYTFCSRVGNTNQFVP
LPVENEVPVFSLTDQNDFALKITVTNFPSDPRNPMADGDDAHEALLTAVFPDTLSYSGVR
QATDSPGTSLDKEIVCISNVNASEATCELGNPMKRDAEITFYLIVSAPRITIETTDLEVK
LELATISEQTNLPAVQARAMVIIELPLSVSGVATPNRLFYSGEVRGESAMRTEEDVGSPI
DIEVTVSNRGKSLRTLGSAFLNLMWPHEMMNGKWLLYPMAIQLKEKEHSNRSMDCTQLKA
INPLKLNTVTGAASAVQRDQTPSSASRWSLTYPEKKKDIILDCSRGTAQCVVFQCPLYSF
DQQVVLKVHGRLWNSSLLEEYPSVSSLEVAVRANITIKSSIKNLVLRDATTQINVMLYSE
YSVAALAGIPWWIILIAVLAGILLLALLVFILWKCGFFKRKRLQEEKLPQHHAVKIPREE
RPMMREEKTGTIKKKDWVTNWSEDGTVQNSS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggaactgggtgctcccctctgcctctcctgcctgctactgctcgctgtgctc
agggtccaagccttcaatctggatgtcaccaacacactgaccaaggatggggaaaagggc
agtttatttggcctctcagtggcccttcacagacaactgaatcctgaccctatgagctgg
cttttggttggagctcctcaggcctcagcattaccaaatcaaaatgccaatcgtacaggg
ggtctatatggatgtccacttactacagagccaaaggactgtatacgacttgatattgac
catggagtcgatgcatctcgtgagagcaaggaaaaccaatggcttggggtcactgtaaag
agtcaaggccctgggggaaaaattgtgacatgtgcacacttgtatgaaactcgccagaga
gtaaaccagctttctgagactcgggatgtgattggccgatgctttgttctgagtgaaggt
ttaaccataagcgaagacctagatggaggggaatggaagttctgtgagggtagagcgttg
ggacacgagatgtttggattctgccagcaaggaatatctgctggattcaccactgacaat
cattatatcatgtttggggccccaggaacatacaactggaaaggggagctccgggtggag
ctatttaatcagagtgccctggccctgggtacttatgatgacggcccatatgaagttgct
ggagagaaaagccagaaaccagaaatgataccagtgccacaccacagttattttggtttc
tcagtcgactcagggtggggggtaacagggcggaacagtctgagctttgtaagcggggca
cctcgggcaaatcatacaggtgctgtggttattcttcagcgggacaatggaagccagctc
atcccagaattgattttatggggagagacattggcatcatcatttggctactctgttgcc
attgaggatctcaacaacgatgggtggatggatttacttgtgggtgcccctaatttcttc
tcacggaaagaggagattggtggtgctgtttacgtgtatatgaatcaggctggaaaactg
gataaatcacccccaatcagactcaatgggtctgatggatctatgttcggaatagcaatc
ggcagtttgggagacattaaccaggatggtttcaaagatgttgccattggagctccatat
gatggaaatggtaaagtttatatttatcatggcagctccaaaggattagttaccaagcca
gcacagattctggatggtataagtgttggaataaagacttttggatactcactgtctggg
gggttagacgttgatggaaactcctatcctgatctgttggtgggctctctttctgacaca
gtagtgctatttaggtcacgcaatgtcattcatgtcctgaaggaggtcattataactcca
caaaatattgacttagagaatgaaaactgcaagcatggcactggaatctgcgtggaacta
agagcatgtttcagttacattgctgtccctgcaaattacaatcctcgaatgactcttaaa
tgtgtccttgaggctgaagcagacagaagacttcaaggaaagtcaagccgagtgattttc
ctaaagcgccattccagtgacttagaataccaacatactagcaccgttgagttgcacaag
caatctgctcgccactgtactactgccacattccagcttcaggaaggtatcaaagacaag
cttcggtccattccagtgaccctgacgtacaacatacacaatgcacatctcaggggccag
ccatctgcagacctgttacccccactcatgcctgttctgagtgacgtggaaagaaatgtc
tataccacagaggtgaatttcctcaaagaaggctgtggagaagacaagatctgccagagt
aacctgcaactcagctacaccttctgttcccgtgtaggaaacaccaaccagtttgtgcca
ctgccagtggaaaacgaggttccggtgttttctctgacggaccagaatgactttgccctt
aagattactgtcactaactttccatcagaccccaggaatccaatggctgatggagacgat
gctcatgaagctctgctgactgcagtctttccagatactctgtcctactctggtgtgcgc
caagccactgacagcccaggcacatctctggacaaggaaatagtctgcatttccaatgtc
aatgcttctgaggcgacatgtgaacttggaaatcccatgaagcgggatgctgagatcact
ttttacctgattgtcagcgccccaagaattactatagagactacagatctggaggtgaaa
cttgaactggccacgataagtgagcagaccaacttgccagcagtacaggccagagccatg
gtgatcattgaacttccattgtctgtgtctggggtggcaactccaaacagattgttttac
agtggggaggtgagaggtgaatccgccatgcgcacagaggaagatgtgggcagcccaata
gatattgaagtgacggtctctaacagagggaaatctttacgtacactgggttctgccttt
ctgaacctcatgtggccacatgaaatgatgaatgggaagtggcttctgtacccaatggca
atccagcttaaggaaaaggagcactctaatcgcagcatggactgcacccaactcaaagcc
atcaatcccctaaaactgaacacagtcacgggagctgcaagtgcagtgcagagggatcaa
acaccaagttctgctagtcggtggtctctaacgtacccagaaaagaaaaaggacatcatt
ctggattgctcgcgaggtactgcccaatgtgtagtcttccaatgcccactgtatagcttt
gaccagcaggtggtgctaaaagttcatggacggctctggaacagcagtttattggaggaa
tatccatctgttagctccttggaagtggctgtcagagcaaacattactataaagtcctct
atcaagaacctggttctgagagatgccaccacacagattaatgtgatgttgtattcagaa
tatagcgtggctgctcttgctggcattccctggtggattatccttattgcagtgctagct
ggaatactgctgctcgctcttcttgttttcatcttatggaagtgtggctttttcaagagg
aaacgccttcaagaagagaagctgccgcagcaccatgccgtgaagatcccaagagaagag
agaccaatgatgagggaggagaagacagggaccattaaaaaaaaggactgggtgacaaac
tggagtgaagatggcacggtgcagaactcctcctaa
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