Xenopus laevis (African clawed frog): 108708587
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Entry
108708587 CDS
T01010
Symbol
gli1.L
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108708587 (gli1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108708587 (gli1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
108708587 (gli1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108708587
NCBI-ProteinID:
XP_018102947
Xenbase:
XB-GENE-17336681
UniProt:
A0A1L8HI29
A0A974HZC0
LinkDB
All DBs
Position
2L:147612680..147690623
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AA seq
1362 aa
AA seq
DB search
MASRQCPPAAVFNSMNPPVNSYVEHCYLRSPNVMAEGMNEMPYCHQTNLMTSHHGFGLAQ
GSDHLAGTDGSRFSTPRSTMKLSKKRAMSISPLSDASIDLQTMIRTSPNSLVAFINSRCS
SASGSYGHLSIGTISPSLGYQNCLNHQRPQAGPYGSNPLMPYNSHEHLSSRGMSMLQPRS
SVKHCQLKSEPLSITGLDPIGSKRLEDESEGDISSPASVGTQDPLLGLLDGRDDLEKDDG
KHEPETVYETNCHWESCTKEFDTQEHLVHHINNEHIHGEKKEFVCHWQDCSRELRPFKAQ
YMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNA
SDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDGMPRA
QSGHEGPGIQNVKGENQLDMDASSARKEDGRLAVPDITLKSQPSPGGQSSCSSERSPLGS
NNNNDSGVEMNANTGGSFEDLTNLDDIPSVDSIGTAGASALRKLENLRIDKLNQLRKAPS
SGKMVKLPSIHNSGPPVCGPLGLSQNQHGIELPSSNHVNHLNDRRNSTTSTMSSAYTVSR
RSSVVSPYLPNQRAGDSGNMVDSYDLSTDPSGHSNEAVCASVLPGLTPAQQYRLKAKYAA
ATGGPPPTPLPNMERMNTNNRMAFASSDYRGSAISSLLGNNTQRRHSSNEYHNYGTGIIH
PAQAPGAGIRRASDPARTGGDIQTVPKVQRFKSMTNMNVSMMGRQGTSIQQAYGGSDANL
QRHMFTPRPPSISENIFMETAGPDGVCHSKEQSIIQPNEMQPYMNYQGQGSQLAAPSDHM
NFNHQMHGLDGQSQNVYSHSQRAMSNMHLNAENYSGQSNVSTHTNFNQCQMTAHNQQFPN
TRQAYSCANLPVQWNEVNSGTMDNPAQSPNHQIMHRNMPPGNHCQSQFSNSTVPEPTKQG
CPVNRNSCQQGMYMNNQKYNHGGQVQVKPEQQFHHSAPSMMSCQNMKHPSRLEQNFTHSN
TMPLSPEATNCDYQGQQDNTQNSCFNVGLNPNLLSPQGRRSQTPMMQVKEMMVRNYVQSQ
QALMWEQHPKSMSMMSNSGEDVDTGQNQHINTPNAAVYMSPKYMKYQGKPSPNNLMSPSS
QDSQSSHTKAMGSPNSQCYNFDMMPRPPCGPKPLSRQQSVSSQSTYMGSPNQLSPSYQSS
ESSPRRMACLPAIQPQPEVTINTSMMYYTGQMEMHHGKAGLHKLTTPLNQNQTSCDGHQH
GQFNSNHSFLKTDSVPYTSSCPGANTLDSLDLENTQIDFTAIIDDADNTIMAGNISPNGL
AGASSHLTTLRNTGAVPNMVVGDLNSVLSSLAGENKYLNTIS
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgccagtgtccgcccgctgctgtctttaactccatgaaccctcctgtgaac
agctatgtggaacactgctacctgaggtctcctaatgttatggcggaagggatgaatgaa
atgccctattgccatcagaccaaccttatgaccagtcaccatggatttggattggcacaa
ggcagcgatcacttggcaggcacagatggatcacgtttctctactcctcgaagtacaatg
aaactgagcaaaaagagagcaatgtcgatctccccactgtcagatgccagcattgatcta
caaaccatgatcaggacctcccccaattccttggtggcttttattaattctagatgttct
tcagctagtgggtcttatggccacctgtctataggaactatcagcccatctcttggttat
caaaattgccttaaccatcagaggccacaagcgggaccctatggaagcaacccactcatg
ccttacaactcccatgaacacctgtccagcagaggaatgagcatgctccagcctcgcagc
tcagtcaagcactgtcagttgaagtctgagccattgtcgattactggcttggatccgatt
gggagcaaaagattagaggatgaatccgaaggagatatatctagtcctgcttcagttgga
acacaggacccactgcttggattgttggatgggcgtgatgacttggagaaggatgatggc
aaacatgagccagaaacagtgtacgagaccaactgtcactgggaaagctgtactaaggag
tttgacactcaggaacatcttgtccatcacataaacaatgaacacatccatggggaaaag
aaggagtttgtgtgtcactggcaggactgttcgcgagaactccgacccttcaaggcgcaa
tatatgctggtggtccatatgaggaggcacaccggggagaagccccacaaatgcacattt
gagggatgtaacaaagcctattcacggcttgagaacttgaagactcacctgaggtcccac
accggcgagaaaccttatgtatgtgagcatgagggctgcaacaaggccttctctaatgcc
tccgacagagccaagcaccaaaatcgaactcactctaatgagaaaccatacgtctgcaag
atccccggctgcaccaagcgctacacagatcctagctctctcaggaagcacgttaagact
gtacatggcccagaagcgcacattaccaagaagcaccgtggagacggaatgcccagggct
cagtctggtcatgagggacctggaattcagaatgttaaaggggaaaaccagctggatatg
gatgcaagctctgctcgcaaggaggatggaagacttgctgtgccagatataactttgaaa
tctcagcccagccctggtggacagtcatcttgcagcagtgaaaggtcgcctttgggaagc
aacaacaataatgatagtggggtggaaatgaatgccaacacaggaggaagctttgaggac
ctcaccaatctagatgatattccttctgtagattcaataggcactgcaggtgcttcagcc
ctaagaaagctggagaatcttaggattgacaaactgaaccaactacgtaaagccccatcc
tcaggaaagatggtcaaactgccttcaatccacaacagtggtcctcccgtctgtggtcca
ctgggtttgtctcaaaatcaacatgggatagaattgccatccagcaaccatgtaaatcac
cttaatgacaggcggaacagcactacaagcaccatgagctcagcctatacagtgagtcgc
agatcctcagtggtgtccccatacctacccaaccaaagagcaggtgattctggtaacatg
gtggattcatatgacctttctacggacccttctggtcattctaatgaagctgtttgtgct
agcgtgcttccaggccttactccagcacagcaatatagattaaaggcaaagtatgctgca
gcaactggtggtcctccacctactccactgcccaacatggagaggatgaatacaaacaat
aggatggcatttgcttctagcgattatcgtggatcagccatctcttccctgctgggtaat
aacactcagagaagacatagtagtaatgagtatcacaactatggaacaggtattattcat
ccagctcaagcaccaggtgctgggataagaagagctagtgaccctgcaagaactggggga
gatattcaaacagttccaaaagtgcagcgcttcaagagtatgacaaatatgaatgtatct
atgatggggcgacaaggtaccagtattcagcaagcatacggaggatctgatgctaattta
caaagacatatgtttactccacggccacccagcattagtgagaatatttttatggaaaca
gctggtcctgatggagtatgccattcaaaggaacaaagcattatccagcctaacgaaatg
cagccctatatgaattaccagggtcaaggatctcagctggctgcacccagtgaccatatg
aactttaatcatcaaatgcatgggttagatggtcaaagccaaaatgtctatagccattct
cagcgagctatgagcaacatgcatctaaatgcagaaaattactcaggccagagcaatgtt
tcaacacatacaaatttcaaccagtgccaaatgactgctcataaccagcaatttcccaac
acaaggcaagcttatagctgtgctaatttacctgtacagtggaatgaggttaattcagga
accatggacaaccctgctcagagcccaaatcaccaaataatgcatcggaatatgccacct
ggaaatcattgccagagtcagttctcaaactctactgtcccagaaccaacaaagcaaggt
tgccctgtaaacagaaattcatgccagcagggaatgtatatgaataatcagaaatataac
catgggggtcaggtgcaggttaagccagaacaacagttccaccattcagctccctccatg
atgtcctgtcaaaacatgaagcatccttctagactagagcagaattttactcactcaaat
acaatgccattgtcacctgaagccacaaactgtgattaccaagggcaacaagacaacact
cagaattcttgctttaatgttggccttaaccctaacttgctaagccctcaagggcgtagg
tctcagacacctatgatgcaggtaaaggaaatgatggtcagaaactatgtccagtcccaa
caagcgctaatgtgggagcaacatccaaaaagtatgtccatgatgagcaacagtggagaa
gatgtagatactgggcaaaaccagcatataaatactccaaatgcagctgtgtatatgagt
cccaagtatatgaagtatcagggcaagccatcaccaaacaacctaatgagtccaagctcc
caagacagccaatcaagtcacaccaaagcaatgggaagcccaaacagtcagtgttacaac
tttgacatgatgccccgtcctccctgtggccccaaacctttaagcaggcaacaaagtgta
tcaagtcagtcaacatacatgggaagtccaaatcagcttagtccatcttaccagtcatct
gaatcaagccccagaagaatggcctgccttcctgcaattcagccacagcctgaagtcacc
atcaacaccagcatgatgtattacaccggtcaaatggaaatgcatcatggtaaagcaggg
ctccataaacttactacaccactaaatcaaaaccagaccagctgtgatggacatcaacat
ggccagttcaattctaatcatagctttctaaagacagactctgtgccgtacacaagttca
tgtccaggtgccaatacattagacagtcttgatctggagaatacacaaattgactttaca
gcaattatagatgatgcagataatactataatggctgggaacataagccccaatggacta
gcaggagcttcctcacacttaaccacactgcgaaacacaggagcggttccaaacatggtg
gtgggggacttgaactcagtgttatcatctctggctggagagaataaatacctaaacaca
atctcctga
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