Xenopus laevis (African clawed frog): 108708607
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Entry
108708607 CDS
T01010
Symbol
pou6f1.L
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108708607 (pou6f1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108708607 (pou6f1.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108708607
NCBI-ProteinID:
XP_018102981
Xenbase:
XB-GENE-17338532
UniProt:
A0A1L8HI90
A0A974HZ88
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Position
2L:complement(149861666..149937931)
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AA seq
600 aa
AA seq
DB search
MDAGTLQQHDGSLTVNEQVIVMSGHETIRVLEVGVDAPVQSEESGKAPETPAPEPADRSD
LARDTVLCHVENTCTEPTVKSTAGLVTTSIPTLFTHASSQPQPTIASFAVQPAPQVLTQE
NLATLLTGVMAPAGPVTQPVLIPISIGGQMAGQQGLALWNFPTATVATLPGLTNASPAGG
VFKLPLANLQAASLLNTALQAPVQAAQAIQTVYQTQPALQAQPSLQTAIQPLTTLQAAAP
LQGTLPKAAETQSQFTVQPASFTFNPAIISAASLGGQTQLLGSLAATPIIANAIPGVQGI
TSQIITNAQGQVIGALPWLLNSPGIAAGAATAVSAQNLVQTVTPQLLLNAQGQVIATLAS
SPIQQAAVRKQSPQDSPAHPKSEQQVIQPTPAITQPSVVVTNPAPPTTSTSTQVHINCSE
PPTVGQLVSKAHGGNYDDDGINLEEIREFAKEFKIRRLSLGLTQTQVGQALTATEGPAYS
QSAICRFEKLDITPKSAQKLKPVLEKWLIEAEMRNQEGQQNLMEFVGGEPSKKRKRRTSF
TPQAVEVLNAYFEKNSLPAGQEITDIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggatgctggaaccttacaacagcacgatggatcacttactgtcaatgagcaggtgatt
gttatgtctggccatgagaccatcagggttcttgaagttggtgttgatgctccagtacag
tctgaggagagcgggaaagctcctgaaactccagcacctgaacctgctgacagaagtgat
ttggcaagagacactgtgctgtgtcatgtagagaatacatgtactgagccaacagtgaaa
tcaacagctggattagtaactacttctattccaactcttttcacccatgcctcaagccag
ccacagcccactattgcatcgtttgctgtgcaacctgccccccaggttttgactcaggaa
aacttagccacacttctgacaggagttatggctccagcagggccggttactcaacctgtt
ctaataccaataagtattggtggtcaaatggctggtcagcagggtctggctctgtggaac
tttccaactgcaacagtagctacattgccaggattaacaaatgcatctcctgctggtggt
gtatttaaactgcctttagccaatttgcaagcagcttctcttttgaatactgccttgcag
gctccagtgcaggctgcccaggccattcagacagtttaccagacacaaccagcactccaa
gcccagccttccctacagacagctatccagccattgaccactctgcaagctgctgcacct
ttacagggcacactaccaaaagcagcggagacacagtcgcaattcacagtacagccagca
agcttcaccttcaacccagccattatcagtgcagcttctcttggtggtcagacacaactc
ctgggctcactggcagccactccaataatagccaatgccattcctggagtacaagggatt
acaagccagataataaccaatgcccagggacaggttattggtgccctaccatggttgctg
aactcaccagggatcgctgcaggtgctgcaacagctgtctctgctcagaatttagtccag
actgtgactcctcagttgctgctaaatgcccaagggcaagtcattgccactctggctagc
agtcccatacagcaagctgctgtcagaaaacaatcccctcaagattcaccagctcatccc
aagtcagaacaacaggtgatccagcctacaccagctattacacaaccttctgtggttgtg
acaaatccagctccacccaccacatcaacatctacacaagtccatatcaattgctctgag
cccccaactgtgggtcagctagtttccaaagcgcatggtgggaactatgatgatgatgga
ataaacctggaggaaatacgtgaatttgctaaggagttcaaaattcgacgcttgtctctg
ggtcttacccagacacaggtgggccaagccctaactgccactgaaggaccagcatacagc
cagtctgccatatgtaggtttgagaaattggacattacaccaaaaagtgctcaaaagcta
aagccagtattggagaaatggttgattgaggcagaaatgaggaatcaagaaggacagcag
aatctaatggaatttgtaggtggagaaccttcaaagaagagaaaaagacgcacctctttc
actccacaggcagtagaggttctgaatgcctactttgagaagaattcgttgcctgctggg
caggaaatcacagatattgctaaagagcttaattatgaccgagaagttgttagggtgtgg
ttctgtaaccgccgccaaactctgaagaataccagcaagctcaatgtctttcagattcct
tag
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