Xenopus laevis (African clawed frog): 108708677
Help
Entry
108708677 CDS
T01010
Symbol
thsd1.L
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
108708677 (thsd1.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
108708677 (thsd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
AJAP1_PANP_C
TSP1_CCN
SID-1_RNA_chan
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
108708677
NCBI-ProteinID:
XP_018103105
Xenbase:
XB-GENE-6486930
UniProt:
A0A1L8HIR9
A0A974DPV6
LinkDB
All DBs
Position
2L:158728555..158740324
Genome browser
AA seq
848 aa
AA seq
DB search
MKHIQNGLTCVLLMILYGFVFSDPGYLLLRETHHVALSRESVFVEYFLSGNKNNTETYNV
SITLLDIGNNQTITSKDIFVDQSHGSLEFDCSHFIAAGLYQFQIIFPDENRSNVDWRSSI
LNVTWPQFHINLNRTSNIRSFQIGVFSNEQFCLTFPDKHPTVLLEVEHTHSFQDLEGISS
DRFMLYKTYKEIPLSPSQWVEFECASVRPEAFITVSLKPMFSESLMAFMGPVDLVKTFRY
KLVTLAEQKCDASVNVNVIPPPCNYADGKVVVYKEVLRGSAETSTTLAENVLQTGDKVAQ
FNCTLFDIGRNKYCFEFFIASGKIYSFLGAKECVGIRREIESWGLWQSWSPCSVTCGDGE
RERFRECLTTSSEKPACKGRPKETSLCSLEECTSISVKPSSKTTTYSKDTKTSNTVTIAG
ISLCLTIIIITIVITLWRKFHKTQKCSSTVKHNATHSGNGRKNSDEENIYQMRESFSDMG
EGLHENVEDTVDIPLTYRQSMRVAEEKNVQENENLQPNVQKIIPPIFSYRLAQQQLKEMK
QRGLTEGTKLYHVSPNPMSDTAVDGALAPPLVTDNCEDNIANKFRIQSPFIEQRNLNPQC
HGERSNPLSPYQGTSPCQTLPRLSQFMNEDPKIRSVERAYHKNNNFRRTSSFHETKHNKP
FRERSLSTLSPRQTMAYNPRTRTWQYPTAERAKHKSIRADKNPENLSKSASFAADPVDLS
SKNLYMWPSESKHDLISSRHAAAKASMLERLEQNRVKKGSSPIEKSWNRVQDYSPTPKDS
YERRSPFSPAQYRREKCQSFPRATDYSFYDNSSFRLTEAEQQMIDLPGYFASNEEDETST
LSMERLVI
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacatacagaatggccttacctgcgtattgctgatgattctctacggatttgtt
tttagtgaccctggctatcttctcctgcgagaaactcatcacgtagccctaagcagggaa
tctgtatttgtggaatattttctttcaggcaataaaaataatacagagacatataacgtg
tccatcactctgttggatataggcaataatcagacaataacaagcaaagacatttttgtt
gaccaatcacacggtagtttagaatttgattgttcccattttatcgctgctggactttat
cagttccaaataatttttcctgacgagaatcggagcaacgttgactggaggagcagcata
ttgaacgtcacttggccccagtttcacattaatttgaacaggacctcgaatataaggtcg
tttcaaattggagtcttctctaacgagcaattttgtctcacgtttccagacaagcaccct
acagttttattagaggttgaacatacgcacagttttcaagacctggaaggaataagcagt
gacagatttatgttgtacaaaacctacaaggaaatccctttgtctccgtcccagtgggta
gaatttgaatgtgcatcagtacgacctgaagctttcatcaccgtgtccctcaaacccatg
ttttcagaatcactcatggcattcatgggccctgttgatctagtaaaaacgttcaggtat
aagcttgttacattagcagaacagaagtgtgatgcctcagtgaacgtaaacgtgatacct
cccccgtgtaattatgcagatgggaaagttgttgtgtacaaggaagtgctgcggggctca
gctgaaaccagcaccactctggcagagaatgttctacaaacaggagacaaggttgctcaa
ttcaactgcactttatttgatattggaaggaacaagtactgttttgagttcttcattgct
tctggcaagatttactcgtttcttggagccaaagaatgtgtggggataagaagagaaata
gagtcatggggtctgtggcaatcgtggagtccgtgcagcgtcacgtgtggagatggcgag
agggagagatttagggaatgccttacaacctcatctgaaaagcctgcctgcaagggacgg
ccaaaggaaacctcactctgctccttagaggaatgcacaagtatatctgtgaaaccgtca
agcaagacaactacgtattctaaggatactaaaacaagcaatactgtgactattgcaggc
atttctctgtgcctgactattatcatcattaccattgtaattactctatggaggaagttt
cacaagactcagaagtgcagctcgacagtgaaacacaacgctacccattcaggcaatggg
cgcaagaattcagatgaagaaaacatttaccagatgagggaaagcttctctgatatggga
gaaggtctccatgagaatgtagaggacaccgttgacatacccttgacatacaggcaaagt
atgcgtgttgcagaagagaaaaatgtacaggaaaatgaaaacttgcaaccaaatgtgcag
aaaataattcctccaatttttagttaccgccttgctcagcagcaactaaaagagatgaaa
caaaggggtttaaccgaaggcacaaagctgtaccatgtttctccgaatccaatgtcagat
acagctgtagatggcgccttggctcctccattagtcacagacaattgcgaagataacatt
gccaacaaattccggatccagtctccatttatagagcagaggaatttgaacccccagtgt
cacggagaaagatcaaatcccttatctccttaccaaggcacaagcccatgccagacacta
ccccgtttatcccaatttatgaatgaagaccccaagatacggtctgttgagagggcatat
cacaaaaataataactttaggagaacctctagtttccatgaaacaaagcacaacaaaccc
ttcagagaaagaagcctatcaacactttccccgaggcagacaatggcatataatcctagg
accagaacatggcagtatcccacagctgaacgagctaaacataaatctataagagctgac
aaaaatcctgaaaatctttcaaaaagtgctagttttgcagctgacccagttgacctttcc
tctaaaaacctgtacatgtggccgagtgaaagcaaacacgacttaatcagcagccgacat
gctgcagcaaaagcatcaatgcttgagagactagaacaaaaccgggtcaagaaaggttcc
tccccaattgagaagtcttggaacagagtgcaggattattctccaacacctaaagacagt
tatgagaggaggagtcctttcagtcctgctcaatacaggagagaaaagtgccaaagtttc
ccccgggcaacagactattctttctatgataattcatcattcaggctcactgaagcagag
caacagatgattgacctgcctgggtattttgcctccaatgaagaggatgaaaccagtaca
ttaagtatggaaaggctagttatttga
DBGET
integrated database retrieval system
