Xenopus laevis (African clawed frog): 108708685
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Entry
108708685 CDS
T01010
Symbol
supt20h.L
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108708685 (supt20h.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108708685 (supt20h.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108708685 (supt20h.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
108708685
NCBI-ProteinID:
XP_018103159
Xenbase:
XB-GENE-17337876
UniProt:
A0A1L8HIU5
A0A974DQD9
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Position
2L:160491385..160554749
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AA seq
860 aa
AA seq
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MQQILELALDRAEYIIESARQRPPKRKHSSGGRKSVFHKLYDLYIEECEKEPEIKKLRRN
VNLLEKLVMQESLSCLVVNLYPGNEGYSLVLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVITEIRDYRQSGNLKSPTYQSRHILLRPTMQTLVSDIHAI
TSDNHKWAQEDKLLLESQLILATAEPLCLDPSVSVTCTANRLLFNKQKMNTCPMKRCLKR
YSKPSLNRQQEISNCPTPPQLKLLDYLHKRKERKSLQPQIDLKISKTGNCLDIWKPNYST
LTVPTEVDVEKYAKVEKSIKLDDSQPTVWPADEMKEDYIFECESGSPFQKAKLTVFQNVG
NPLYFGRLQTFKSQGDNEYNLRHSQFPIGSKFEIDRVVGQYLDLFEIETKSVVKLSHSTR
SSLSHSPLSPGKEIESDGIPGSVQSSVLGKGVKHRPPPIKLPPGSASSSSGNIFSSLQAS
GHLKSTTPPPNKPPSISRKQSVDHNQAGMLSPGAMSPASSSQRSGTPKPSTPTPTNTPAS
TPHPPDALNSTPITPSVTPTPQDSSFNSQATLLNPFAQQQMSLGQGLPVMTIPLSTMVTS
ITTGTTSTQVMANPTGLNFINVVGSVCGPQTLMSGSNPILGCNTGAITPAGINLSGILPS
GGLVSGALPAAMQSASQAGGPFGLKTTSGLRPLNLLQLSGAPILFNPMQQQQQQVSQFSP
QQPQQTSTSSPQQQVEQLGLLPSGMDQVSSNHDQTLSAQQAAVINLTGVGGFMPPQAAVL
SQLGSAGNRPGQNLPSQRLQLPSALQQQQQQIQLQFLHHQMQQQVAMATAAQAAPFPPLP
HSDSQSRSKRRGSAGFDAKP
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagattttggaattggcactggatcgcgctgagtatatcattgagagcgccaga
cagaggcctccaaaacggaaacattcatctggaggaaggaaatccgtgtttcataagtta
tatgacttgtacattgaagaatgtgaaaaagagccagaaataaagaagctgagacgaaat
gtgaacttgctggagaagctggtaatgcaggaatccctctcttgccttgtggtcaatctg
tatcctggaaatgaagggtactctcttgtgcttcgcggaaaaaatggatcagattctgaa
acaatccgtcttccctatgaagaaggagaactcttggaatatctggatgctgaagaattg
ccaccaattttagtagatctgctggaaaaatctcaggttaatatttttcattgtgggtgt
gttataacggaaattcgtgactacaggcagtctggcaacttaaaatctccaacataccaa
agcaggcatattctcttacgaccaacaatgcagaccttggtttcagacatacatgccatc
accagtgacaaccataaatgggcgcaggaggacaagcttttgttggagagccaattgatt
ttggcaacagcagagcctttatgccttgatccctcggtatctgttacctgtactgcaaac
cggctgttgttcaacaagcagaagatgaacacatgcccaatgaagaggtgtttgaaaagg
tattccaaaccatctttaaatagacagcaagaaatatcaaactgtcccaccccacctcaa
ctgaaactgctggactatctacataaaaggaaggaaagaaaatctctacagcctcagatt
gacctaaaaatatccaaaactggaaactgtttagacatatggaaaccaaactacagcact
ttaacagtaccaacggaggtggatgttgaaaaatatgcaaaagtggaaaaatctatcaaa
cttgatgattcccaacctactgtctggccagcagatgagatgaaagaggattacatattt
gaatgtgaaagtggcagcccattccagaaagcaaagctgaccgttttccagaatgtaggc
aatcctctctacttcggcagattacagactttcaaaagccaaggcgataatgaatacaac
ctccgccactctcaatttccaattggatctaagtttgaaattgaccgggttgtcggtcag
tatcttgacttgtttgaaattgaaaccaaaagtgtggtgaagttgagtcatagtaccaga
tcctcgctcagccatagtccgctttctcctggcaaagaaatagagtctgacggtatccct
ggctctgttcaatcctctgttttgggaaaaggcgtcaaacacaggccacctcccataaaa
cttcctccaggctctgcatcgagttcttcaggtaatatttttagttccctgcaggcaagt
ggccatctcaagtccacaacccctcctcccaataagcccccaagtatctctcggaagcaa
tcagtggaccataatcaggctggaatgctttctccaggggcaatgtcccccgccagctct
tcacaaagatctggaactcccaaaccatctactcctacaccaaccaacaccccagcatcg
actccgcatcctcctgatgctttgaactcaactcctatcaccccttctgttacccctaca
ccccaagattcaagctttaattcacaggccactttgttaaatccatttgctcagcagcaa
atgtctctgggtcagggcttgcctgtaatgaccatcccactatccaccatggtaacatct
atcactacaggaaccacctccacccaggtcatggcaaatcctactggactaaacttcatc
aatgtagttggctctgtatgtggtccacagacactgatgagcggatcaaacccaatacta
gggtgtaacactggtgccattacccctgcagggataaatctgagtggcattttaccatca
ggaggtctagtgtcaggggcattgccggctgccatgcagtctgcctcacaggcaggtggc
ccatttggcttaaaaactacttcaggtctgaggcctttaaatctgctgcagctttctggt
gctccaatcctattcaacccaatgcagcagcagcaacaacaagtctcccagttttcacct
caacagccccaacagacatccacttccagccctcagcagcaggtagaacagttggggctg
ttaccttcgggaatggaccaagtttctagcaaccacgaccaaactttatcagctcagcag
gccgctgtaattaacttaaccggagtaggcggcttcatgcctccccaagcagctgtgttg
tctcagcttggctctgctgggaacagacccgggcaaaacctgccatcacagagactgcag
ctcccttctgccttacaacaacagcagcaacaaatacaattgcaattcttgcatcatcaa
atgcagcagcaagtggctatggcaacagcagcacaagcagccccgttcccacccctgcct
cattccgacagccaatcaagaagtaaaaggaggggcagtgccggatttgatgcaaaaccc
tga
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