Xenopus laevis (African clawed frog): 108708716
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Entry
108708716 CDS
T01010
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108708716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108708716
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108708716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_9
PH
SH3_2
RHG20_PH
Ehrlichia_rpt
Motif
Other DBs
NCBI-GeneID:
108708716
NCBI-ProteinID:
XP_018103211
UniProt:
A0A1L8HJ33
A0A974HZR5
LinkDB
All DBs
Position
2L:166316547..166369451
Genome browser
AA seq
1255 aa
AA seq
DB search
MVESMTSLCNGCENGTVANSQAIDNGDLRTLTDGTGHGGEPSTNQDDLHNDNQNSSKIVY
FFTTSKQRTNLNNDRPRSMMAVGNSSTWNALSSLRKMGSFKKLKSSVLQGIQAKENANII
SDHETEVQKCKPCRMPISKSMQDGYNLADGLQSDGSDAEETDNAFLRSTHRSRSIRRAYG
SGRIHLSDTDKACASQSPLRPLSPVGQEHSNCEIIVKDLKGSQVIYRRSKSTDNLNFLKK
SSFKRKSTSNLTDIKFNSEKEIVQKASLCTSPDSDRTATTPERRSKRWRSPIRAKDFDRV
LKIMSNVTDGHWKREGSRCTSPAPEESHRSRPNSRLHDDYSRRVSSSADTERRRSALNAP
SPVPFAVCRLSYTDSNMDYLDSEAQVKSAESRQCSESLCTEPSNKSDTSSSLNQLDNEVF
YADGEDPKHHTPSVSGTPVRPTAPKPQSPSMELYKSAISIHCQNHSTLSLSSMESDERTE
PAAPKVEKSPPSFKDSAKLTYYDDGNEDSGISSHSQLSLNAVSEEKQEEVDHEEPFKKSP
PQEDEKKSDSQKVASRRWSSAKCRPRQRPLSDYGQSAIRSFSIPEDSIATESQETDSGKC
RFPSQSFSEETRAQEHIPKYQMNCRRRPISVIGGVNFFATSEDEEMGAMIQQSVPRPPIP
AHKVPPYKAVSARLRPFALSQSTPIGLDRVGRQQQLRASNVSADGGAESSALVDDNGSEE
DYSYEELCQANPRYLHPGGEQLAINELISDGSVVYAEALWDHVTMDDQELAFKAGEVIHV
LEASNKDWWWGRIRDREAWFPASFVRLRVNQEDVSENSCSFHEEDHDMAVSKSRHKNAEN
MDQMRANVVREIMDTERVYIKHLKDICEGYIKQCRKHTSMFTEGQLNTIFGNIEDIYKFQ
KNFLKDLEKKHNKDEPHLSEIGDCFLNNQDGFSIYSEYCNNHPNACSELSNLMKQGKYRH
FFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSKIKEAYEAMKN
VACLINERKRRLESIDKIARWQVSIVGWEGQDILARSSELIHSGELTMIIKQGKSQQRTF
FLFDHQMVFCKKDLLRRDILYYKGRIDMDEMEFADVEDGKDRDFNLNIKNAFKVMNRLTD
EVNLFCAKKQEDKQRWIQAFLDERKRVQDDKAMGMEISEDQKKQAMHNAKKSRQGKMKGV
SYSGVPSHQNLHPIHQRHITVPTSIPQQQVFALAEPKRKNSPFWSTITKLTPFKK
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggttgagagtatgacgtcactctgcaatggctgtgagaatggcacagtagctaattct
caagctatagataatggcgacttgagaactttaactgatgggaccggccatggtggagaa
cctagcaccaaccaagatgatctacacaatgataatcagaactcttctaagattgtgtac
ttttttaccacctccaaacaaaggaccaacctgaataatgaccgtccccgttccatgatg
gctgtgggcaactcatcgacgtggaatgctttgtcttccttgagaaagatgggctccttc
aagaaactgaagtcgtcagttctgcagggaatccaagcaaaagaaaatgccaatattata
agtgaccatgagacggaggttcagaagtgtaagccttgcagaatgcctatatcaaagtcc
atgcaggatggatataatctggccgatgggttacagtctgatggatcagatgcagaggaa
accgataatgccttcttgaggagcactcatagatctcgcagcatcaggcgcgcctacgga
tctggccgtattcatttatcagatacagacaaagcttgtgcctcacaaagtcccctcagg
cccttgtcgccggttggccaagagcacagtaattgtgaaatcatagtgaaagacctaaaa
ggcagtcaggttatttacaggcggagtaaaagtacggacaacttgaattttctcaaaaag
agctcgttcaagcggaaatctacctccaatctaacggacatcaagttcaacagcgagaaa
gaaattgtacaaaaggcgtcactttgcacttctccagattcagacaggacggccacgact
ccagaaagaaggtcaaagcgctggagaagtcccattagggcgaaagactttgaccgggtg
ttgaaaataatgagcaatgtcactgatgggcattggaaaagagaggggagtaggtgcaca
tccccggcccctgaggaatcccatagaagtaggccaaatagtcgcttgcatgatgattac
tccaggagagtgtccagcagtgccgacacagagagacggaggtctgctcttaatgccccc
tccccagttccttttgctgtatgccgtcttagctataccgattccaacatggattatcta
gactctgaagcccaagtgaaatctgcagagagtagacagtgttctgaaagcctctgtaca
gaaccctctaataaatccgatacaagcagtagcttgaaccagttggataatgaggttttc
tatgcagacggtgaggatccaaaacatcacactccatctgtctccggtacccctgtccga
cccactgctcccaagcctcagagccccagtatggaactgtacaagtcagccatttccatc
cattgccaaaaccacagcactttgtcactgagctctatggaaagtgatgaaagaacagaa
ccagccgcccctaaggttgagaagagccccccgtcctttaaagactctgcaaagctgact
tactatgacgatggtaatgaagatagtggaatcagcagccactctcagctgagtctcaat
gcggtcagtgaagagaaacaagaagaggttgaccatgaagaacccttcaagaaatctcca
ccgcaagaggatgaaaaaaagtctgattctcaaaaagtggcatctcgaagatggagctct
gcaaaatgcaggcctcgacagaggccactgtccgactacggtcagtctgctatccgtagc
ttctccattccagaagattctattgctaccgagtcccaagaaaccgatagtgggaagtgt
aggtttccctcacagtcttttagtgaggaaacgcgggcgcaagagcatatccctaagtac
caaatgaactgtagaagacgtcccatctctgtcataggtggggtcaacttttttgcaaca
agcgaggatgaagaaatgggagctatgattcaacaatctgttcctcgacccccaattcca
gcccacaaggttcctccgtacaaggctgtctctgcccgtttaagaccttttgccttgtcc
cagagcacaccaataggcctagatcgagttggacgtcaacaacaactaagggcttctaac
gtttcagcagatggaggggctgagtcttctgctttggttgatgacaatgggagtgaagag
gactatagctatgaagagctttgccaagccaatcccagatatctgcatccaggaggagag
cagctagcaattaatgagttgataagtgatggcagtgtggtgtatgcggaagctctgtgg
gatcatgtcacaatggatgatcaagaactggccttcaaggcaggagaggtcatccatgtt
ctcgaggcatctaataaggactggtggtggggcagaattcgggaccgtgaggcctggttt
cctgctagcttcgtacggttacgtgtcaaccaggaggatgtatctgaaaactcttgtagc
ttccatgaagaagatcatgacatggctgtttcaaagtcccgccacaagaacgctgagaac
atggaccagatgagggctaatgtagttcgggaaataatggacacagagcgggtctacatc
aagcatctaaaagatatatgtgagggatacatcaagcagtgtcggaaacacaccagcatg
ttcacggaaggtcagctcaacaccatatttggaaacattgaagacatttacaagttccaa
aagaacttcttaaaagatcttgagaagaaacacaacaaagatgaacctcacttgagcgaa
atcggggactgttttctcaataatcaagatggtttttccatctactctgagtactgtaac
aatcatcccaatgcgtgctcggagttgtccaacctgatgaagcaagggaagtaccgtcac
tttttcgaggcctgcaggcttctgcagcagatgatagatattgctattgatggtttccta
ctgacccctgtgcagaagatctgtaaatacccactacagttagcggagttgttgaagtat
acaactcaggagcacagcgattacagcaaaataaaagaagcttacgaagccatgaaaaat
gttgcttgtttaattaatgagcgaaaaaggcgcctggaaagcatagacaagattgcccgc
tggcaggtttccatcgtcggttgggagggacaagatatattggccagaagttcagaactg
attcactctggagagctgacgatgataattaaacaaggaaagagccaacaaaggacgttc
ttcctctttgaccatcaaatggtcttctgcaagaaagatctgctgcgcagggacatcctg
tattacaaggggcggattgacatggacgagatggagtttgccgatgttgaagatgggaag
gatcgggactttaatctgaatatcaagaacgcctttaaagtcatgaatcgattaacagac
gaggtcaatcttttttgtgcaaaaaaacaagaggacaaacaaaggtggatccaggccttc
ttggatgaaaggaaaagagttcaggatgacaaagctatggggatggagatctccgaagac
caaaagaagcaagcaatgcacaacgccaagaaatcaaggcaggggaagatgaaaggagta
tcttacagtggagttccttctcatcagaacttgcacccgattcaccagcgccacatcacc
gtgcctaccagcattccccagcagcaggtatttgcactggcagaacccaagcgcaagaat
tctcccttctggagcacaatcaccaaacttaccccattcaagaaataa
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