KEGG   Xenopus laevis (African clawed frog): 108708726
Entry
108708726         CDS       T01010                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03410  Base excision repair
xla04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108708726
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108708726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    108708726
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108708726
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 BRCT VWA BRCT_2 VWA_2 PARP_reg PTCB-BRCT LIG3_BRCT VWA_CoxE DUF6473
Other DBs
NCBI-GeneID: 108708726
NCBI-ProteinID: XP_041438607
UniProt: A0A8J1MA74
LinkDB
Position
2L:complement(168107217..168236128)
AA seq 1692 aa
MTVAIFSDCVFFLKINDLSFKERKALKFTITSNGGVISFVLNQKCTHVVVNTIGCLSASQ
QKNVQKHRIQIVDSHFIWKCLEEKSLIHDYQYPTAGVQPSETKSQSQQADPEKAPALQNK
DELMDSDHSEYDAETFIDPPDTEVAKYCFFHKGFNVAFLELLCFPESSSFLFKISKVICN
SNGAEPDKSFHFANTAEAACNKYEKCSEDLKKQGFKSRERIPAKVALQTSEALQKVLLEE
AINATKLSADVGYFVETVWTEALGHLDNILSCPVNSISLNDVSKAEGVLLQARKALDTGT
EPRDIMNAMVEFYRLIPHKIPMLANVNKKFLSTKQDLCQVIRDMVSVCETNLSKPNPSSL
AKYQALRCQIEHVDPDTEEFHQVSQQIMENKHCEESVNILKIFRIGKLSEATGFQRNLGN
VKSLLHASSPCHFVGILSRGLLLPKNVEDDLGLERTDIGNLGSGVYFGDSISTSVKYSEP
SLTNGARHLLVCDVALGNSKDLYKRDFSLTEAPSGFDSVHGVRQVPGRKSDFEDDEFVVY
SKDQVKMKYVVQFCTAKDQVNMEHDKLPVQVEPMEEDVGEESVQAEDPALESLPEPQSVK
GGLQSVHGNQIPLENIHVKGRIMDLVAEVILFQTYINQSSVPIEAKYVFPLDSTAAVCGF
EAFINGKHVIGEVKEKKQAHQEYRAAIREGHGAYLMDQDAADIFTVSVGNLPPNATVIIK
ITYITELNMNYRTVDFKLPGTVASWQKDKALKENTQDTVEKICVEESGVPKGCFSLEMSV
EMCFKITSMMSYTHEILMKKTDCKAVIATKKGSSLNEEGFELAVALESNFADSSWNQPRM
WVEKHPDEESEACMLVFLPSFETHIQSWDLTILLDCSNSMESTFQSAKRIALLAAGLLNT
WHNVNIINFGTSYKEFSIRPKENNSNALTEVEQFIKLVKPNMGNTELWKPLQSLCLLAPS
GGTMHNVLLISDGHVQNESRVFQILKKNAGKVRLFTCGVGSTANRHMLRCLAQYGAGFFE
FFEDKSKSSWKKKMEAQLEKMDSPACTSASVKWMQFSENEPEPVQAPAHIPALFNRSCLL
VYGFAPRCTQAKLQALIDDKELDTVVSTTELQKTRGTMLHKLTARAIIKDYEDGILHEKE
HEHEMKKQQTKSFIIELSKKYSIVTQFTSFVAVEKRDAQEKPKDYVPNVLEIISAEVVDI
LPYMTWETQKEEEKAVVNVLNGPPRYLFTKYTELTPCKDILKFLDCNSSANDILHSDDFF
ADGTPDCFSDCIEEQAEMKLIQDGLRIAGDALHSASVYEGEIMYEGKIMTPKSSSVFDMP
SRLEHQLQQRRPPGAPRIMQRRQCVISTVTKASPSIMQMHQCVSSDVSKAAAISSVSEAS
PTFSFGTAGLARSAVSEAVRTFSSGTAGFKSFHMKAVAQSNALSSAATSSGFLGSASGFG
VNTAAQSSGLMGSPPGFSFALPPQPPLAAAQASISPSYEEARWNQRWQPGQRSCRVTAQE
QVYELLCRKEEVQMPKTLLRRSAFAMPHMALQQQASMPSKRARTRPSFLTLSALQCEEGY
WLLNEELGSLLNINVNYLIDEFLSKNGIQSLGRKGKEEVLKMIATLLVLQVICTFKLVNV
TFKSLMKLDESCCTSPYYQTIEKSTKWARKTDDQYPGICSRLGLGKDWESATRKLLSIDP
LDPSSSLLPAVV
NT seq 5079 nt   +upstreamnt  +downstreamnt
atgactgtggcaatcttttccgattgtgtgttcttcctgaaaataaacgacttgtctttt
aaggagaggaaagcgttaaaattcacaataacctcgaatggtggagttatttcctttgtg
ctgaatcagaagtgcactcatgttgtggtgaacaccattggctgtctaagtgcttctcag
cagaagaatgtccagaagcatcggattcaaattgtggacagtcattttatatggaaatgt
ctagaagagaaaagtcttattcatgactaccaatatccgactgctggtgtccaaccaagt
gagacaaaatcacaaagccaacaagcagatccagaaaaagccccggcactgcaaaacaag
gatgaattaatggacagtgatcacagtgagtacgatgcagaaaccttcatcgaccctcca
gacacggaagtagccaaatactgcttttttcataaaggcttcaatgtggcatttttggag
ctgttgtgctttccagaatcctcttcattcctatttaaaatatctaaagtcatttgtaat
tccaacggagctgagcctgacaaatcctttcacttcgcgaacacagcggaggcggcttgc
aataagtatgaaaagtgctctgaagatttaaaaaaacaaggctttaagagtcgagagcgt
attccagcaaaggttgccctgcaaacatctgaggctctgcagaaggtcctgcttgaagaa
gccataaatgcgaccaagttgtctgcagatgttggatattttgtggaaactgtttggact
gaggctcttggccacttggataacatcctctcgtgtcccgtaaacagcattagtctgaat
gatgtgagcaaagcagagggtgttctgcttcaggctaggaaagcgctggacacaggaaca
gaacctagagacataatgaatgcaatggttgagttctatcggcttattccccataaaata
cccatgctggctaacgtaaacaagaagtttttgtcaacaaaacaggatttgtgccaggtt
atcagagatatggtcagtgtatgtgaaaccaacttatcaaagccgaatccaagtagcctt
gctaaataccaagccctgcgatgccaaatagaacacgtggaccccgatactgaggagttt
catcaggtgtcacaacaaattatggagaacaaacactgcgaggagtcggttaacatactg
aaaatattccgcattggaaaattaagtgaagccacagggtttcaaaggaatcttgggaat
gtcaagtcactgcttcatgcatcttccccatgtcattttgtggggatcctgtcccgtggg
ctactcttgccaaaaaatgtggaagatgatttgggtttagagagaactgatattggaaat
cttggaagtggagtttatttcggtgattcaataagtacaagtgttaaatattcggaaccc
agtttaaccaatggggcgcgtcacttgttggtttgtgatgtggctctgggtaacagcaag
gatctctacaaaagagacttctcacttactgaagctccaagtggctttgacagcgttcat
ggagtccggcaagtgccaggaaggaaatctgattttgaggatgatgaatttgtggtatat
agcaaggatcaagtaaaaatgaaatacgttgtgcagttttgcactgctaaagaccaagtc
aacatggaacatgacaaacttccggttcaagttgagcccatggaggaagatgttggagaa
gaatcagtacaggcagaagatcccgcattggagagtctgccggaaccacagagcgttaaa
ggcggcctccagagtgttcatggcaaccagatccctttagaaaatattcatgtgaaaggc
agaataatggatttagttgcagaggttatattattccagacctacataaaccaatcctca
gttcccatcgaggctaaatatgtttttcccctggacagcacagcagccgtgtgtggattt
gaagcatttataaatggaaaacacgttataggagaggtgaaagagaagaagcaagcgcac
caggagtacagggctgctatcagggagggacacggggcttaccttatggaccaagatgct
gccgacatcttcacagtaagtgtcggaaacctgcccccaaacgccacagtaatcattaag
atcacttacataacggagttgaacatgaattacagaacagtggatttcaagcttcctggc
acagtggcatcttggcaaaaggataaagctctgaaggaaaatactcaggatacagtagaa
aaaatctgtgttgaagaaagtggcgtgccaaagggttgtttctctctggagatgtccgtt
gagatgtgtttcaagattacgagcatgatgtcgtacactcacgagattttaatgaaaaaa
accgattgcaaagctgtgattgcaactaaaaagggcagttcattgaacgaggaggggttt
gagctggcagtcgctctggaatcaaactttgcagactcttcttggaaccagccaaggatg
tgggtggaaaaacatcctgatgaagagagtgaggcatgcatgcttgtgttcctgcctagt
tttgagacacacatacaatcctgggatttaaccatcttactcgattgctccaattctatg
gaatccactttccaaagtgccaaacggattgctctgcttgcggccggcttgttaaacaca
tggcacaacgtaaacataatcaactttggtacaagttataaggaatttagcatccgtcca
aaagagaataacagcaacgcattaacggaggtggaacagtttatcaaattggtcaaacca
aacatgggaaacacagagctttggaagcctctgcagtccttatgtttgctggctccttcc
ggaggaacaatgcacaatgttcttcttatatctgacggacacgtccagaatgaaagtcgc
gttttccagatccttaaaaagaatgcagggaaagtgcggctattcacatgtggtgttggt
tcaacagccaatcgccatatgttgcggtgtttggctcaatatggggctgggttctttgaa
ttttttgaagataaatctaagtccagctggaaaaaaaagatggaggcccagctggaaaaa
atggattcccctgcatgcacaagtgcgtctgttaaatggatgcagttcagtgaaaatgag
ccagagcctgtgcaagcaccagcacacataccggctttgttcaaccgcagttgccttctt
gtttatggctttgctcctcgttgcactcaggccaagctacaagctttaatcgatgacaaa
gaactggacactgtggtatcaactacagaattacagaagaccagaggaacgatgcttcat
aaactgacagcaagggccattattaaggattatgaagacggaatcctacacgagaaagaa
catgagcatgagatgaaaaagcagcagacaaagtcctttattattgagctgagcaagaaa
tactcaattgtcactcagtttacaagctttgtcgcagttgagaaacgggatgcacaagag
aagccaaaggactatgtaccaaatgtgcttgaaataatatctgcagaagttgttgatata
ttaccatacatgacatgggaaacacagaaagaagaagaaaaagccgtggtgaatgtacta
aatggacctcctagataccttttcacaaagtacacggaactcacgccgtgcaaggacata
ttaaagtttctggattgtaattcttcagctaatgacattctccattctgatgactttttc
gctgatggcacaccagactgcttttccgactgcatagaggaacaggctgagatgaaactg
atccaagatggtttacgcatcgctggtgacgctctacattctgcatcagtgtatgaaggg
gaaataatgtatgaagggaaaataatgactccaaagtcttcatctgtgtttgatatgcca
tcgcgtttggaacaccagctgcaacaaagacgaccgcccggagccccacgtatcatgcaa
aggcgtcagtgcgtgatttcaactgttacaaaagcatctccaagtatcatgcaaatgcat
cagtgcgtgagttctgatgtttcgaaagcagctgcaatttcaagtgtttcagaagcatct
ccaactttcagctttggaactgcaggacttgcacgttctgctgtttcagaagcagttcgg
actttcagctctggaactgcaggatttaaaagttttcacatgaaggctgttgctcagagt
aatgccctttcgtcagcggctacaagttctggctttttgggttcagcttcaggtttcggt
gttaatactgctgctcagagctctggtcttatgggttcacctccaggtttcagctttgca
cttccacctcagcctccgttggctgctgcccaggcttcaatatctccatcatatgaggag
gctcgctggaaccaacggtggcagccaggacagcgttcctgcagagtcactgcgcaggag
caagtgtatgagctgctgtgcaggaaggaagaggttcagatgcctaaaacattgctgcgg
agatctgcttttgcaatgcctcacatggctctacaacagcaggcatcgatgccttctaaa
agagccagaacccggccgtctttcttaaccctttcagctctgcagtgtgaggagggatac
tggctgctcaatgaagagctcggatctctgttaaatattaatgtcaattacttgatcgat
gaatttttgtccaagaatgggattcagtctctagggaggaaaggcaaagaagaggtgctg
aaaatgattgccaccctattggtgctgcaagtgatttgtacctttaagctggtgaatgtg
acattcaagagtctgatgaagctggatgaatcatgttgtacaagcccctattaccagacg
attgagaaatccaccaagtgggcacgaaaaacagatgatcaatatcctggcatctgttct
cgactcggattgggcaaggattgggaatctgccacccggaagttattgtccattgatcca
ctggatccttcctccagtcttctccctgctgttgtgtaa

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