Xenopus laevis (African clawed frog): 108708735
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Entry
108708735 CDS
T01010
Symbol
zc3h12c.L
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108708735 (zc3h12c.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108708735 (zc3h12c.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108708735
NCBI-ProteinID:
XP_018103251
Xenbase:
XB-GENE-6485895
UniProt:
A0A974HZZ7
A0A1L8HJE0
LinkDB
All DBs
Position
2L:171777281..171804451
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AA seq
879 aa
AA seq
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MSVCSPPKEFRPHYQSFGNSRQVVPDTCSSFMGLKDHRKNSLGHLYVESSETHISAIVPW
TILRKPTMDKTNSRKDDSDKDTSGEMCSSSGDSEESTNSDNESDLSGRLAAERVTKKHRQ
FCRSPCIEPHILKRNEIIQDLKTEQNVASTKEIKTPPDVVKEYQTKLDFALKLGYSEEQV
LLVLNKLGSNALINDILGELVKLGSKSENEQNGGGNGAVLRETSSIESQRPESPFQQELI
DDAENLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVSWFLERGHKDVTVFVPAWRKEQSRP
DALITDQEVLRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDL
ANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEYKKQPCPYG
KKCTYGHKCKYYHPERGSQPQRSVADELRAMSRSSAAKTASEVGLVKSNSVPSNAKMDTN
YDLKRSTPKRQSDPSIRTQAYDLEEKLPTKNKFESRSVPSLVSISTNKPQSTTPLRNGIL
SVGHLSSQDRASPALYSPSIMSTKSHGAMSCDQYPQCDSPVDAGYYSMMNAYSNLSISGG
RSPDRRFSLDTDYRISSVASDCSSEGSLSCGSSDSYVGYNDRSHVSSPDPPLDENKCQRM
HPHPRSGSQSYMPCYHEPLTRVQSFGHEQEQKHHHKPQPPYMSGTPQHLTVAARSSCPND
YRISHNSPISKNGIMGRSLVSTRMESISDSRLYESPPPRHHKPYLSQEATGSWDRPYGVD
PYGYCQNNSVSGNPSQPCYEQFAFQSPPDHQDHSWRIPYCGLPQEPPRYPLGTREKVFIN
LCNIFPAELVRLVMKRNPHVTDAQQLAAAILVEKSQYGY
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctgctcccctcctaaagaattcaggccccattatcaaagcttcggaaacagc
agacaggtggtgcctgacacatgtagcagcttcatgggattaaaggaccatcggaagaat
agccttggacatctttatgtggagagcagtgaaacgcacataagtgcaattgtgccgtgg
actattttgcggaaaccaacaatggataaaacaaattcaaggaaagatgattccgataaa
gacacttctggggagatgtgcagctcaagtggggactcagaagaaagcacaaattctgat
aacgaatccgatctatcaggtagacttgcggcagaacgtgtaactaagaagcacagacag
ttctgcagatccccttgtatagaaccacacatactaaagcgcaatgagattatacaagac
cttaaaacagagcaaaatgtagcaagtactaaagaaataaaaaccccaccagatgtggtg
aaggaataccaaaccaaactggactttgcacttaaacttggttactcggaagaacaggtt
ctacttgtcctcaacaaacttggttctaatgctttaattaatgacattttgggggagctt
gtgaaacttggtagcaagagtgagaatgaacagaatggtggtggaaatggtgcagtcttg
cgggagacctcctccatcgagtctcagagaccagaatctccttttcagcaagagctgatt
gatgatgctgaaaacctaagacctattgtcattgatggcagcaatgttgcaatgagtcat
gggaataaagaagtcttttcttgccgtgggattaagttggctgtctcctggtttttggaa
aggggccataaagatgtgactgtctttgtccctgcatggcggaaggagcagtccagacct
gatgccctcattacagatcaggaagtcttaaggaaattggaaaaggaaaagatcctcgtc
tttaccccgtctcggcgtgttcagggcagaagggtggtgtgctacgatgaccgctttata
gtgaagctggcattcgagtcggatggcatcattgtgtctaatgacaattacagggatctg
gcaaacgaaaagccagagtggaagaagttcattgacgagaggctgctaatgtattccttc
gttaatgacaagtttatgcctcctgatgatccattggggcgccatgggccgagcctcgat
aactttttgaggaagaaacctgtagtccctgaatacaagaagcagccgtgtccttatgga
aagaaatgtacatatgggcataagtgcaaatattatcacccggaaaggggtagccaaccg
cagcgttcagttgcagatgaactccgtgccatgtctagaagcagcgcagccaaaacagcc
agtgaagttggacttgtcaaaagcaacagtgtcccttccaatgccaagatggataccaac
tatgacttgaaacgttctaccccaaagaggcaatcagaccccagtataagaactcaagct
tatgacttagaagaaaaacttcctaccaaaaataagtttgaaagcaggtcagtgccatct
ttagttagcatatctactaataaaccccaaagcacaacaccactgaggaatggaattctt
tcagttgggcatttatcatctcaggatagagcctcacccgccctctactctccaagtatt
atgtctacaaaaagtcatggtgccatgtcatgtgaccagtacccccaatgcgactcacca
gtggatgcaggatattactccatgatgaatgcttattcaaatcttagtatttctggaggt
cgaagtcctgataggcgtttctcattggacacggattacagaattagctcagtagcttct
gactgcagcagtgaaggaagcttgagctgtggtagcagtgactcgtatgttggctacaat
gatcgttctcatgtcagctctccagatccaccattggatgaaaacaagtgtcagcgcatg
cacccccaccctcgctcaggttctcagtcatatatgccctgctaccatgagcctttaacc
agagtccaaagttttggtcatgagcaggaacaaaagcatcaccacaagccacagcctcca
tacatgtcaggaacccctcaacaccttactgttgcagcccgttcaagctgtccaaatgat
taccgcatttcccacaattcccctatttccaagaacggaattatgggtagatctttagtc
tccacgagaatggaaagtatctcggattctcgtttgtatgaaagtcccccgcctcgacat
cataagccatatttaagccaagaagccaccgggagctgggataggccttatggtgtggac
ccttatggttactgtcagaataattctgtgtctggcaacccttcacaaccatgttatgag
caatttgctttccaaagcccaccagaccaccaggatcatagttggcggataccgtactgt
ggtctaccgcaagaacctccgagatatcctctgggtaccagagagaaagtttttataaac
ctatgcaacatctttcccgcggaacttgtccggcttgttatgaaaagaaatccacatgtc
acggatgctcagcagcttgcggcagccattttagtggagaaatcccagtatggatactga
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