Xenopus laevis (African clawed frog): 108708887
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Entry
108708887 CDS
T01010
Symbol
scarf1.S
Name
(RefSeq) scavenger receptor class F member 1-like
KO
K24318
scavenger receptor class F member 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108708887 (scarf1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108708887 (scarf1.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Phagocytosis
Scavenger receptors
108708887 (scarf1.S)
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_PEAR1L
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
108708887
NCBI-ProteinID:
XP_018104037
Xenbase:
XB-GENE-17336480
UniProt:
A0A1L8H600
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Position
2S:36186929..36229150
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AA seq
872 aa
AA seq
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MGVPGGRHRLQVIICFWSWLQAMCSMQDLDPKGANVCKSESVTMGLVCCPGWRQEGRACT
AAICEGDDTCETDEVCIRPGVCRCKPGYFGASCNSRCPDKYWGSDCKQSCSCFPNGKCDP
VNGQCTCNPDHWGPNCQHLCLCFQHGTCNPLTGACQCKHGWWAPYCNKPCHCNLQTSRCS
QATGQCICDTGWWGLKCSVKCNCNNSPCLQTNGKCKCQEGWWGVSCEHQCDCLHGNCNPL
NGKCDCNVGYQGPSCADPCNPGTYGTNCKNRCGRCKQGQSCSPVDGLCLSCDPGWNGIRC
DQPCPPGYHGENCGQRCPKCRGTEECNRETGTCAHCDAGTLGPRCDSKCPSGSYGERCQY
LCPVCIHGTCDAKTGECICDTGYWKHSCNETCPHGYFGSNCSSSCDCGGGPCSPRYGTCQ
WTSSQKGAVIAGVLVPVLCLLFILCCCCSCGTDQSDSKERVSQEGGPLSRMKHNFQGTLA
NISSLLPCCSVGNSKLSWVTVSHHDAELPFNHSFIESPSTGWLSENSFSSFESDEGGPVY
CVPPREGMSIADLNGFQEISSKCNVFPDSLAFNADDVSQPFSIPRTSSNAKAKRPSVSFA
EGTKFGSRRSSATETPNLARKPKLALSLPKLPSIHSQPINGDGLAHSEQANDFYEKVCIN
QEPEDHPKLHRNVPVGRRRAMSNAQKVALKSEAVESSVIENVYDTKRKSTGVTTVYVSVG
LPKKIYKPRRRSEGNIDGAVQAVLKRLGSFQKGIPKPARKNVQTSNTKIPPPKISEEEAF
TVGNNNSPCAKFHDNQARKMLMPTSSVLKKILSGVEEGTECVHSSDKLENMYSSLAEPVA
LLEQAEFAEHIYHTTENTDSEPKYENICYKLQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgccaggggggagacacagacttcaggtcattatttgcttttggagttggctt
caagcaatgtgctctatgcaggatctggatcccaagggggccaatgtttgtaaatcagaa
agtgtcaccatggggcttgtgtgctgcccggggtggagacaggaaggacgagcgtgcaca
gctgcaatctgtgaaggagacgacacctgtgagacagatgaagtttgtattaggcctgga
gtctgtcgctgcaaacctgggtactttggagccagctgtaactcacgttgccctgacaag
tattggggatcagactgcaagcaaagctgctcttgttttcctaatgggaagtgtgaccct
gtgaatgggcaatgcacctgcaatccagatcactggggacctaactgccagcatctctgc
ctctgtttccaacatggaacctgcaaccctctcactggcgcatgtcaatgtaagcatgga
tggtgggcaccctattgcaacaaaccgtgccattgtaacctacagacttcacgctgtagc
caagctactggccagtgcatctgtgatacagggtggtggggtctgaaatgcagtgtgaaa
tgtaactgtaacaactcaccctgccttcagaccaatggcaaatgcaaatgtcaagaaggc
tggtggggggtttcctgtgagcaccagtgtgattgcctccatggcaactgtaacccccta
aatggaaaatgtgactgtaatgtaggatatcaaggaccaagctgtgccgatccctgcaat
cctgggacatatggaaccaactgcaaaaacagatgcggacgctgcaagcagggacagagt
tgctccccggtggatggtctttgtctgtcctgtgacccaggctggaatgggatccgttgt
gaccagccatgcccaccaggatatcatggagaaaactgtgggcaaagatgcccaaaatgc
cgtggaactgaggaatgtaacagggagactgggacctgcgcacattgtgatgctggaaca
ctgggacctagatgtgattcgaaatgcccatctggaagctatggagaaagatgccaatat
ctatgtcctgtctgcattcatggaacctgtgacgccaaaactggggagtgtatttgtgac
actggatattggaaacacagttgcaatgagacatgccctcatggctattttggatcaaac
tgctcaagcagctgcgattgtggtgggggtccctgcagcccaagatacggaacatgtcaa
tggacatccagtcaaaaaggagctgtgattgctggagtccttgtgcctgtgttatgcctc
cttttcattttgtgctgttgctgcagttgtggaactgaccagtctgattcaaaagaaagg
gtatcccaagaaggagggccgctttctagaatgaagcacaattttcaagggaccttggct
aacataagttcactgttaccctgttgttctgttgggaattcaaaactctcctgggtaact
gtctctcaccacgatgcagagcttccttttaatcatagtttcattgagtctccttccact
ggctggttgtctgagaactctttttcttcatttgaatcagatgaaggtggtccagtctac
tgtgttcctccaagagaaggaatgtccatagctgatctgaatggatttcaggagataagt
tccaaatgtaatgtctttccagattctttggcttttaatgcagacgatgtctcccagcca
ttttctatccccaggacatctagcaatgccaaagctaaacgaccgtctgtgtcatttgct
gagggaactaaatttgggagtagaaggtcatcagctactgagaccccaaatcttgcacgg
aaaccaaaacttgctttaagtcttccaaaattgccttctattcactcacagcccatcaat
ggagatggtctcgctcacagtgagcaagccaatgatttctatgaaaaggtttgtattaac
caggagccagaagatcatccaaaactgcatagaaatgtgcccgtcggccgcaggagggct
atgtctaatgctcagaaggtagcactgaaatcagaagcagtagaatctagtgtaatagaa
aatgtttatgatacaaaacgtaaaagcactggtgttactactgtttatgtgagtgttgga
cttccaaaaaagatttacaaacctcggagaagatcagaaggtaatattgatggtgctgtg
caggctgtattaaaacgtttgggcagctttcagaaaggtattccgaaacctgctagaaaa
aatgtacagacatccaatactaaaattccgccaccgaagatatctgaggaagaagccttt
acagtaggcaacaataactctccgtgtgctaaatttcacgacaatcaagcaaggaaaatg
cttatgccaacatcttccgttcttaagaaaatactgtccggagttgaggaggggacagaa
tgtgtgcacagttctgataagcttgaaaatatgtattccagtttggctgaaccagttgca
ctactggaacaagcggaattcgcagagcatatttatcatactacagagaatacagactcg
gaaccaaagtatgagaatatatgttacaaattgcaataa
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