Xenopus laevis (African clawed frog): 108708911
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Entry
108708911 CDS
T01010
Symbol
fmod.S
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108708911 (fmod.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
108708911 (fmod.S)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
108708911 (fmod.S)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
LRR_5
LRRNT
LRR_9
LRR_LRWD1
LRR_EndoS
LRR_14
LRR_Zer-1
AMPKBI
Motif
Other DBs
NCBI-GeneID:
108708911
NCBI-ProteinID:
XP_018104059
Xenbase:
XB-GENE-6488974
UniProt:
A0A974HVE7
A0A1L8H6T8
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All DBs
Position
2S:59745159..59752414
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AA seq
357 aa
AA seq
DB search
MIILVFLLFISVCDVSWCQYDEYDSHWWIAYMHSQQYSYGPSYDYEPVPAPPSASDCPQE
CECPPNYPTAMYCDGRDLKYMPYVPARIKYAYFQNNHITAIPDGAFDNATGLVWLALHGN
QIVSDKVGRKIFSKLRGLERIYLQHNNLTRIPTGLPRSLREIHLSSNQISRVPSNALEGL
ENLTALYLHDNQIQEVGSVLKGLKSLVHLDISNNQLRKLPDSLPDSLQQVYLEYNQLNNV
PNEYFKSYPKLQYVRISHNRLTNEGIPGSTFNTSSLIELDLSFNQLNRIPPVNTNLEHLY
LQGNKIEELSVKSFCTFVDITNFSQLQVLRLEGNEIKANAIPPDTPLCLRKADIIHM
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattattttggtgtttcttctcttcatctctgtgtgtgatgtttcttggtgccagtat
gatgaatatgattcccattggtggattgcctatatgcacagtcagcagtacagctatgga
ccttcctatgactatgagccagtcccagcacctccatctgccagtgactgcccccaggag
tgtgagtgcccccctaactatccaacagccatgtactgtgatgggcgtgatctcaagtac
atgccctatgtcccagctcgaattaaatatgcatactttcagaacaaccatataactgca
attccagatggagcctttgataatgccactgggttggtatggttagcactgcatggtaac
cagattgtaagtgacaaagtaggcagaaagatattctccaaacttcgaggattggagagg
atttatctgcaacataacaatctgacccgtatacccactggtctgcctcgttcactgcgt
gagatacacctttcttctaatcagatctcgcgagttccatcaaatgctttagaaggtctg
gagaaccttactgcactttacctacatgataatcaaattcaagaggtagggagtgttcta
aaagggttgaagtcccttgtacatttggacattagcaataatcaacttcgtaagctaccc
gactcattaccagactctctgcaacaggtgtatttggaatacaatcaactcaataatgtt
cctaatgagtatttcaagtcctatccaaagcttcagtatgtaaggatctcacataatcgt
cttactaatgaagggatcccaggaagtacattcaacactagcagtctaatagagctagac
ttgtctttcaaccaactgaatcgcattccacctgtcaacacaaatctggaacatctatac
ttgcagggaaataaaattgaagagttatcagttaaaagcttttgcacatttgtggacatc
accaacttctctcagcttcaggttttgcgccttgaaggtaatgaaattaaggctaatgct
atcccaccggacacgccactttgccttcgtaaagctgacatcatccatatgtag
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integrated database retrieval system
