Xenopus laevis (African clawed frog): 108708921
Help
Entry
108708921 CDS
T01010
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108708921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108708921
03021 Transcription machinery [BR:
xla03021
]
108708921
03036 Chromosome and associated proteins [BR:
xla03036
]
108708921
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
ARID
108708921
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108708921
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108708921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108708921
NCBI-ProteinID:
XP_018104067
UniProt:
A0A8J0UAS1
LinkDB
All DBs
Position
2S:67399918..67443236
Genome browser
AA seq
2051 aa
AA seq
DB search
MAAQVAPASGPSLGGTPPAAGSDLKKSPGDPPPPPNESQQEAPVTASNETDSTEASNGTR
AVPASSHQEPGDPPAASSASSHSPGGFGFSPYPRGVFQPGPGLDYPPPTDAYNSYPAYPN
RAYPPGYPPPRPPVSTGKPPAPAYAPPPPRFGPPQPAAATPTLNQLLTAPSPGRGYPVYP
GGDYTDQHKGAEGYTAGWAAGQRGVHPPGSPGSSVQGLPRTPQPATPMDQMGKMRPQPYG
ASNPYSQQQGAQQGHTGYPVQPYSSQSPQRYPMSMQGRPQGGMSMQYGQQMSPYTQQSPG
SYTQQSQSPYYNQQSLHPTQQPQTTPPQNQYSQQQSGPQSYSQQQAPSSQPPPTQSGQPT
FTQQQSPSPSSYTQQQGAPTSSQSQSPYTQQTAQYSSTQQQVSTYPSTGAQQSGTYTQQR
FPPPQELSQDSFTSQASSTPSLGSSKGQDDLSMGMQPRPSSLPDLSGSIDDLPMGAEGAL
SPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAPSRSGPLSPT
AVPGTQMPPRPPSVQSDGLIHPTMNQASLGQERGYMQRNAPIPQYGSPQPGPALSPRQST
AAQMHSGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNTIPNAGYSAGGMVPLVAGGQM
HGQGGMPQYTGRMGHSGMGNRPYGPNMGSMPPQVGSGMCPPPAGMNRKAQEAAGMHATPN
SLQSRSPGYPNMNQGGMMGSGTPYGQGMNSMAAIMNPQGNPYMSGNMVNNSGMAGSPDLM
GLPDVKLTPTPKMNNKADGTPKSETKSKKSSSSTTTNEKITKLYELGAEPDRKMWVDRYL
SFIEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSA
ASSLKKQYIQCLYAFECKIERGEDPPPDIFTSAESKKQAKIQPPSPAGSGSMQGPQTPQS
TSSSMAEGGDLKPPTPASTPHSHMPPMPGMRNNSVGLQEAYDGSDPSYQKRNSITPNPGY
QTDMMGRMPYETGKDPYGNMRKGADPFMPSGQGPSGTMGDPYSRGTGPAMPNLGQRQHYP
YGGYDRVRGEPGLGPEGAMGTGGNPQNMMPSNADSGMYSPGRYPQQRHDSYGNQYPTQGT
AAGSPYSSQQNPLYQQQNYKRPMDGSYGPSSKRHEGEMYGGPYSAGQAGQNQQQPQPPPQ
QQPPGSGAPPPTPGQPPAVTNTQPQDPYVQYGGSYPQGTERRPVASGQNQFPFQFGRERV
SAAPGSNSQPPLPSSIMSNSGEGNQQGAIWQSRNDMSYNYQGRPGPPAANIQGQGYHSVP
PRGEDMLHSDQRLGHEGQWPPHVNRQQPPYVPAPGPPMTRAPPQSGYQASPSMPNHLPQV
PSPATPRPLEAHTSPSKSPFLKMQKAGPPVPASHIVPTPTPPLIRRDITFPPGSVEATQP
ILKPRRRLAAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPG
LLELLVEYFRRCLIEIFGILREYEVGEHAQKTLLQPFPSDSSSLVSGDAELGDEDDRRSM
TDGDPQSEDEEGFEEREAYNTPFSGNEDIQQQSSKFDRLPIKVVPKEDPFVLDCSHQLGR
LQEFESGLLHWRIGGGDTTEHIQTHFERRPEPPSRRRLTVKRRSREQQIPAAEDTTPTID
DLLCAQPSSLSPEIGEATGEDIKFSLGGSPPPRNRHGMKILEDEPHSKDETPLCTLEDWQ
DALSRRCVCISNILRSLSFVPGNDLEMSKHPGLLLLLGKLVLLHHKHPERKQAPLTYEKE
EERDQGVSCNKAEWWWDCLEMLRENALVTLANISGQLDLSSYPESICLPILDGLLHWVVC
PSAEAQDPFVTLGPNAVLSPQRLVLEALSKLSIQDSNVDLILATPPFSRLEKLYGTLVRF
LSDRKNHVCREMAVVLLANLAQGDMLAARVIALQKGTIGNLLGFLEDSLAATQFQQSQAA
HLHGSSAPFEPTSTDMMRRASRALLALAKVEENHPEFTLYEARLLDISVSPLMNCSVSQV
ICDVLFLIGQS
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccaggtggccccggcctccggccctagtttggggggaaccccgcccgctgcc
ggctccgacctaaaaaagagtcccggggatccccctcctccaccgaacgagtcgcagcaa
gaggctccggtcactgcttcaaacgaaacggactcaacggaagcgtccaatgggacacga
gcagtgccggcctcttcacaccaggagcctggggatccgcctgcggcctcctccgcctca
tcccactcgcctggcgggttcggcttctctccgtacccgagaggcgtttttcagcccggc
cctggcttggactatcctcctcctaccgatgcctataactcgtacccggcctaccctaac
cgggcctacccaccgggctaccccccgcctcgcccgccagtctccacaggcaagccgccg
gctccggcctacgctccccctccacctcgattcggaccaccgcaaccagcagctgcgacc
cctacactcaaccagttgctgacagcgcccagccccgggcggggatatccggtctacccg
gggggagactacacggatcaacacaaaggagccgaaggttatacagccggctgggccgcg
ggccaaaggggagtgcatcccccgggcagtccgggaagcagcgttcaaggactgcccagg
acaccgcagccggctacccccatggatcagatgggaaaaatgcgaccccagccatatggg
gcaagtaatccatacagccagcagcagggagctcaacagggacacactgggtacccagtg
cagccttactcttcccagagtccgcagagatatcctatgtccatgcaaggaagaccacaa
ggtggcatgagcatgcagtatgggcaacagatgtctccatatactcagcagagtcccggg
tcctacactcaacagagccagtctccttactacaaccagcagagcctccaccctacacag
caaccacaaacaactcccccacagaaccagtattctcagcagcaatcaggtcctcagtct
tattcgcagcaacaagctccatcctctcagcctccccctactcaatctggacagcccaca
tttacccaacagcagtccccatccccatcttcatacacacagcagcagggtgcccccacc
agctcacagagccagtcaccgtatacccaacaaactgcccagtactcctctacacagcag
caggtttcaacttatccctcgacaggagcacaacaatcgggaacatacactcagcagcgg
tttcctccaccacaggagctctctcaggattccttcacatcacaagcatcatccacacct
tctctgggctccagcaaagggcaggatgacttgagtatgggaatgcaaccacggccttct
agtctacctgatctttctggttctattgatgatctcccaatgggtgcagaaggagcactg
agtccaggcgtcagcacatccgggatctccagcagccaaggcgagcagagcaatcctgcc
caatctcctttctcacctcacacttccccacacctccctggcattaggggtccttcccct
tctcctgttggttccccggcaagtgtggcaccatctcgctctggacccttgtctccaact
gctgtccctggaactcagatgcccccacggccccctagtgtgcagtcagatggtctgatc
caccctacaatgaaccaggctagccttgggcaggagcgagggtacatgcagaggaatgca
ccgatacctcaatatggatcccctcagcctggcccagcactttcccctcgccagtctact
gcggcacaaatgcattctgggatggggtcctatcaacaaaattccatgggtagctatggt
cctcagggaggacagtatggacctcaaggtgggtatccacgtcagcctaactataatacc
atacccaacgctggatactctgcaggaggaatggtcccgcttgttgcaggtgggcagatg
catgggcagggaggaatgcctcagtacaccggacgcatgggccactctggtatgggcaac
cgtccatatgggcctaacatgggcagtatgccgccacaggtgggctctgggatgtgccca
cctcctgcaggcatgaaccgcaaagcacaagaggctgctggcatgcatgccacccccaac
tcgttacagagcaggtctccaggatatccaaacatgaaccagggtggaatgatgggatct
ggcacaccttatggtcaaggcatgaatagtatggcggctataatgaacccacagggaaat
ccctacatgagtggcaacatggttaacaactcaggcatggctggcagtccagatctcatg
ggtcttcctgatgtcaagttgactccaacccctaaaatgaacaacaaagcagatgggaca
ccaaaatcagagaccaaatctaagaagtccagttcctccactactacaaatgaaaaaatt
acaaagctgtatgagctgggagcagagcctgacaggaagatgtgggtagatcgttacctg
tcgttcatagaagaaaaggccatgggcatgaccaacctaccagcagtgggcaggaagcca
cttgatttgtaccgcctatatgtgtctgtcaaggaaattggagggctaacccaggtaaac
aaaaacaagaagtggcgagagctggcaacaaacctgaatgtgggcacttcaagcagtgct
gcaagctcactaaaaaaacagtacatacagtgtctgtatgcctttgaatgcaaaattgag
agaggagaagatccaccgccagatatctttacctctgctgaatccaagaaacaagccaag
attcagcccccttcaccagctggctctggctctatgcaggggccacagacccctcaatct
acaagcagttcaatggctgaaggaggagaccttaaacccccaacgccagcatcaactcct
catagccatatgccacctatgcctggtatgagaaataattccgtaggtcttcaggaggca
tatgatggttcagatccttcctaccagaaaagaaattccattaccccaaatcctgggtac
cagacagacatgatgggcagaatgccttatgagacgggcaaggatccttatgggaacatg
agaaaaggagcagaccctttcatgccctcaggacaaggtccaagtgggacaatgggggac
ccttatagccgcggtacaggtcctgctatgcccaacttgggacaacgtcagcactaccct
tacggtggttatgacagagtgaggggtgagcctggtctaggccctgaaggtgcaatggga
actggaggtaatccgcaaaatatgatgccttccaatgcagacagtggcatgtattctcct
ggacgatatccacagcagaggcatgactcctatgggaaccagtatcccacgcagggcaca
gctgctggcagcccgtattctagccaacagaaccctctgtaccagcaacagaactacaaa
aggcccatggatggtagttatggcccttcttcaaaacgtcatgaaggtgaaatgtatggt
ggcccatacagtgcagggcaagctgggcagaaccaacagcagccccagccaccacctcaa
cagcagcccccagggtctggagcaccacccccaacccctggacagcctcctgcagttacg
aatactcagccgcaggacccttatgtgcagtatggaggcagctatccccagggaactgaa
cgccgaccggttgccagtgggcagaaccaatttcctttccaatttggacgtgaaagagtg
tctgctgctcctgggagtaactcccaaccccctttaccatccagtataatgagcaactca
ggagagggaaaccaacaaggcgctatttggcaaagcagaaatgatatgagctataactac
caaggcaggcctggacctcctgcagctaatatccaggggcaaggctaccattcagtcccc
ccacgtggggaagacatgctgcactcagaccagcgtctcggtcatgaaggtcagtggccg
cctcatgttaacaggcagcagccaccttatgtgcctgctcctggacctcccatgacacgg
gctcccccacagtctgggtatcaagcctctcccagcatgcccaaccatctgcctcaggta
cctagtccagcaactcctcgtcccctggaagcccacacttcacccagtaagtctccgttc
ttgaagatgcagaaggctggaccacctgtgcctgcctctcacattgtgcccacaccgact
ccaccacttatccgcagggacattacttttcctccagggtcggtagaagccacacagcct
attctcaagccaaggcgaaggcttgcagccaaggatatagggacacctgaggcttggcgt
gtaatgatgtcattaaagtctggtctcctggctgaaagtacctgggctctagacacaatt
aacattctgctgtatgatgacaacagcatcatgaccttcaacctcagtcaactccctgga
ttattagagctgttagtggaatatttcagacggtgcctgattgaaatctttgggatcctc
cgagagtatgaagttggagaacatgctcaaaagacattgcttcaaccttttccatctgat
tcttcaagccttgtctcaggtgatgcagaattaggggatgaggatgatcgtcggtctatg
acagatggtgacccccaaagtgaggatgaagagggctttgaggagagagaggcctataat
actcccttttctggtaatgaggatattcaacaacaaagcagcaagtttgaccggctccca
ataaaagtggttccaaaggaagatccctttgtgttagactgctctcatcagttgggccgc
ttacaagaatttgaaagtggcctcttgcactggcgaattggagggggggacacaactgaa
cacatccagacacattttgaaagacgtccagaacccccttcacgcaggcggctcacagta
aaacgccgttcccgggagcagcagattccagcagcagaggacaccactcctaccattgat
gatttgctgtgtgcccagccaagctcattatcaccggagattggtgaagccactggagaa
gatattaaattttcattgggtgggagccctccaccgcgaaacaggcatggtatgaaaata
ttagaggatgagcctcacagcaaagatgaaaccccgttgtgcacattggaggactggcaa
gatgctctgtccaggcgttgtgtgtgcatttccaacatcttgcgtagcttgtcctttgtg
ccaggcaatgacttggaaatgtccaaacatcctgggctgttgctgctactgggaaagttg
gtgcttctgcaccataagcatccagaacgcaagcaagcaccactcacttatgagaaagaa
gaagagagggatcagggagtaagctgtaacaaggcagagtggtggtgggactgcctagag
atgttgcgtgagaatgccttggttacgcttgcaaatatctctgggcagctggatctttct
tcctaccctgagagcatatgtctgcctattctggatggcctcttacactgggtggtgtgt
ccttcagctgaggcacaggacccctttgtgacactgggccccaatgcggtgctgtccccc
cagagactggttcttgaagcccttagcaagttaagtatccaggacagcaatgtggacctc
attctggccacaccgcccttcagtcgcttggagaagttgtatgggaccttggtaaggttc
ttaagtgacagaaaaaaccatgtgtgcagggaaatggcagttgtgcttttagccaatcta
gctcaaggtgacatgttggcagcaagggttattgccctccagaaaggcactattggaaac
cttctgggctttttagaggacagtctggctgccacccagtttcagcagagtcaggctgcc
cacctgcatggttcctctgcaccgtttgagccgaccagcacagacatgatgcgacgggca
tcccgtgccctgctggcattggcaaaagttgaggagaaccacccagaattcaccctgtat
gaggcacgcttgctggacatctctgtctctccactcatgaactgctccgtgtcacaggta
atctgtgatgttctcttcttgattggccagtcatga
DBGET
integrated database retrieval system
