Xenopus laevis (African clawed frog): 108708944
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Entry
108708944 CDS
T01010
Symbol
impg2.S
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xla00536
]
108708944 (impg2.S)
Glycosaminoglycan binding proteins [BR:
xla00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
108708944 (impg2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
DUF4214
Motif
Other DBs
NCBI-GeneID:
108708944
NCBI-ProteinID:
XP_041440080
Xenbase:
XB-GENE-17335263
UniProt:
A0A1L8H8J7
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Position
2S:96700103..96747101
Genome browser
AA seq
1784 aa
AA seq
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MEHLLWHLFLGFFCLSVMDGERQTLAEVSTSVENSEQREMTDILGTEAGSGTLHEELKSP
PAIATPLLYRSFLRRRKRSILFPNGVKVCPEESIDQALANHMKFFKLRVCQETVWEVFKI
FWDRLPNQTEYQQWMKLCEEGTMTAFDIGAKFSMSQEHHQLVTKKLSITKHAASGTCNGW
SCGKDIAPWFHLCSSEATPLPSAHETTTFRDAAANVPLSYEISVEIETPTDYSELLPEEI
MNNEIILMTEKPLMPVVEKMIEMSIILPREPYNIELSDKFSSAHHKLSETFLDQVQNMFE
ILPGYKTMFVQELSPSVLDDRIAVEVRFAVIFDGDADAINNASMDLINLHYNKDENSAFN
EIEDNPTASYTGGSFTSYIVERLHEQMLLENRTLDFTLNSLQLIKIENAPLDNFNEWTSI
TEQPTIPLPSTADVNKALQAEWLPNAHSTLSNIVPAAENNEQLTTKSEVVVENVVIADNI
ASTVEDTDLIIDGSPGFEYSFTTPAVSPLFQENDIIALIETRLTTVSSLNIELDSQEESG
DNELLLYEQPTLNILSDKVPKSTSPSTKTYILPAILPTFETSSPAEESNADIVTSAIAAE
KPSFESSFVNQIMGTGSTILTHTENDALVLSVDTFTQGSKLEKNELLIESNLPTTSLQPG
LIIHSDEGSGSGFIPFVKVDETDNMQWTISTVEPHHSINQIYTTNDIMEIPEIHNDINPF
NEQTNRMDSVSKLVPKESEQSVTYSSTEGLVHLPGMSATESAPALWTFETAAIKQSSEMD
IYDYSFTESNSLTESAMEYAAVDASGEEMSWIPTNSLQTQELSSLKNMFSELDTEVDTDN
SSSNEIQPLNLQVISLSTYSPIREYGSLFNTKPDKYNAILATSLDAGNAEVETDVTTSPI
SNEIQPLNQQVHSLITSPPIKGHDSHTEHAVLPISLDAGNGDAQTDVTVRAISNEIQPNL
QVLSLTTLQPIREHEFLLTTELAVLETSSEAVSEEVQSDVTTSSISNEIQPLNLQLLSLT
TSPPIRELDSLLNKENSILATSLDAGNKEVETDVTIGAISNEMHPLNLQELSLTTYPPIR
EHDSLLTTKHAILTASLEDVNEEVHTDVTINTISNEIQPLNRHVLSLTTSPPIRELDSLL
NKENSILATPLDASNEDIEKEVTINSTFDEIQPFNSQVLSLTLSPPIKEHDSLLNIGHDK
DNLVLVTSLDTRNEEAYIDVTVSSPFNGMQPLNPHSFGNSTTPPIRELESPFNTEITSPP
IREHDSLLSTEINKDNTILISLSDARNEEHTLFTNDESSITDEMLNTAPNIISNKTSTFH
DIDSTIKVDNSPTTHREAVDIDSVTEYKHVFSDASMEPIDTQSSAVLSVKKEEEVTVEVQ
NISLELDHLSTVYYHPDMSPEERSMVAKNIHSTDLASVIFSSHEKGGNVSASARALVVFF
SLRVTNMIFSEDLFNKNSPEYKALEQRFLELLVPYLQSNLTGFQNLEILNFRNGSIIVNS
RMKFAKPVPRNVSNAVYIILEDFCNTAYQTMNLAIDKYSLDVESGYIADPCKFQACNEYS
ECLINKWSGEGECVCNPGYVSVDGMPCQSLCDLEIEFCQNDGKCDIIPGQGAICRCRVGE
NWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASAVIFFLARTLRVQNSKGDQEESFGRP
NDSISSIERPVKYNPMYESDITGYSHYCKRYPHYSSTTSTSPETSADFSSEEIRHIYEHS
ELSKEEIQDRIRIIELYAKDKQFAEFVRQHQMSVDNVRQANPTS
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcttctatggcatctcttcttgggtttcttttgcctttcagtgatggacgga
gagaggcaaactcttgcagaagtcagcacatcagtggaaaatagcgaacaaagggaaatg
actgatatacttggaacagaagctggaagtggaacattgcatgaagaactaaagtcacct
ccagccattgcaacacctctactctacagaagtttcctcaggaggagaaaaagatccatt
ttatttccaaatggagtcaaagtatgcccagaagaatccatcgaccaggccctggcaaat
catatgaaattttttaaactaagggtatgccaagaaactgtctgggaggtgttcaagata
ttctgggaccgtctacccaaccaaacagaataccaacaatggatgaagttatgtgaagag
ggcaccatgacagcatttgacattggagccaaatttagcatgtctcaagaacatcaccaa
ttagtcacaaagaaactgtcaataactaaacatgcagccagtgggacatgcaatgggtgg
tcttgtggcaaagacattgctccatggtttcacctgtgcagctcagaagcaacaccattg
ccttcagcacatgaaactacaacatttcgagatgcagctgccaatgtgccactttcatat
gaaatatcagtggaaattgaaacccccacagactattctgagctactgcctgaggaaatt
atgaacaatgaaataatcctgatgacagagaagccattaatgccagtggtagaaaagatg
atagagatgagtatcattcttcccagggagccatataacatagaactaagtgacaaattt
tcttctgcacaccacaagctttcagaaacatttcttgatcaggtgcaaaatatgtttgaa
attcttccaggatacaaaacaatgtttgtccaggaattaagtccttccgtactggacgac
agaattgctgtggaagtgcgctttgctgtcatttttgatggtgacgcagatgctataaat
aatgcttctatggacctcatcaacctccattataataaagatgaaaatagtgcatttaat
gaaattgaagacaaccctacagcaagttatacaggtggcagctttacaagttacatagta
gaaaggctgcatgagcaaatgttacttgaaaaccgtaccctggacttcactcttaactca
cttcagctgataaaaattgaaaatgctccattagataattttaatgaatggacatctata
actgagcagccaacaattccactgccgtcaactgcagatgttaacaaggcactacaagct
gaatggcttccaaatgctcattcaacattaagcaatattgtgcctgcagcagaaaataat
gaacagctgactacaaaaagtgaagttgtagtggaaaatgtagttattgcagacaacatt
gcaagcacagttgaagacacagacctaattattgatgggtctcctggttttgaatacagt
tttacaactccagctgtgtctcctctttttcaggaaaatgacatcattgcattgatagaa
accagattgactacagtttctagtttaaatatcgagttagatagtcaagaagaatctggg
gataatgaattgcttctatatgagcagcctactttaaatatattgtctgacaaagtgcca
aaaagtacatcaccttctaccaaaacctatattttaccagccattctgccaacatttgag
acttcttcaccagcagaagaatctaatgcagacattgtgacatctgctatagctgcagaa
aagccttcttttgaatcttcttttgtaaaccaaataatgggaactggaagtaccatcctt
actcatactgaaaatgatgccttagtgctctcagttgacactttcacacaagggagtaaa
ttagaaaagaatgagttattgatagaatccaatttaccaacaactagtttacagcctgga
cttattattcattctgatgagggatcaggttcaggttttataccttttgtaaaggtagat
gagactgacaatatgcaatggactatatcaacagtggaacctcaccattctattaaccaa
atatatactactaatgacataatggagattccagaaatacacaatgacatcaaccccttt
aatgaacagactaatagaatggacagtgtttcaaagctggtacctaaagagtctgagcaa
tctgttacctactcttcaacagaaggtctggtacatctaccaggaatgtcagcaacagaa
tctgctcctgcgttatggacatttgaaactgcagccattaagcagtcatcagaaatggat
atatatgactattcattcactgaatcaaatagtttaactgaatcagctatggaatatgca
gctgtagatgcatcaggtgaagagatgtcatggataccaaccaattctctgcaaacacaa
gaattatcatcattgaaaaacatgttttcagaattggacactgaagtggacactgacaac
tcctcatctaatgaaatacaaccattaaacctgcaggtcattagtcttagcacatattca
ccaattagagaatatggatctctgtttaacacaaaacctgataagtataatgcaatatta
gcaacatcactagatgctgggaatgcagaagtggagacagacgtgacaaccagcccaatc
tctaatgaaatacaaccattaaaccagcaggtccatagtctcattacatctccaccaatc
aaaggacatgattcacacacagagcatgctgtattaccaatatcattagatgctgggaat
ggagatgcacagacagacgtgacagttagagctatctctaatgaaatacaaccaaatctg
caggtgctcagtcttactacattgcagccaatcagggaacatgaatttctgttaaccaca
gaacttgcagtattagaaacatcatcagaggctgtcagtgaagaagtgcagtcagatgtg
acaacaagctcaatttctaatgaaatacaaccattaaacttgcagttacttagtcttact
acgtctccaccaatcagagaacttgattctctgttaaacaaagaaaattcaatattagca
acatcactagatgctggcaataaggaagtagagacagatgtgacaatcggtgcaatttct
aatgaaatgcatccattaaacctgcaagaacttagtcttactacatatccaccaatcagg
gaacatgattctttattaaccactaaacatgcaatattaacagcatcattagaagatgtc
aatgaagaagtgcacacagatgtgacaatcaacacaatctctaatgaaatacaaccatta
aaccgacatgtccttagtcttactacatctccaccaatcagagaacttgattctctgtta
aacaaagaaaattcaatattagcaactccattagatgctagcaatgaagatatagagaaa
gaagttacaatcaactccacgtttgatgaaatacaaccatttaactcacaggttcttagt
cttactttatcacctccaattaaagagcatgattctctgttaaacatagggcatgataaa
gataatttagttttagttacatcattagatactaggaatgaagaagcttacatagatgtg
acagtcagctcccccttcaatggaatgcagccattaaacccacatagctttggtaatagt
acaactccaccaatcagagaactggagtctccatttaacacagaaatcacatctccacca
atcagagaacatgactctctgttaagcacagaaatcaataaagataatacaatattaatc
tcattgtcagatgctaggaatgaagaacatacattatttacaaatgatgagtcaagtatt
actgatgaaatgttgaatacagccccaaacattatttccaataagacaagtacattccat
gacattgacagtacaataaaagtagataatagtcccactactcatagagaagctgttgac
atagattcagtgacagagtataaacatgtttttagtgatgcctcaatggaaccaatagat
acacagagttctgctgttctttcagtaaaaaaagaggaagaagtaacagtggaagttcag
aatatatccttagaattagatcacttaagtacagtttattatcaccctgacatgagtcca
gaagaaagaagcatggtggctaaaaacattcattctacagaccttgctagtgtgattttc
tcatctcatgagaagggcggaaatgtttcagcttctgcaagagcacttgtggtgtttttc
agtcttcgtgtcaccaacatgatattttcagaggatttgtttaacaaaaactctcctgaa
tataaagctctggaacaaagatttttagaactgctggttccatatctccagtccaatcta
actggctttcaaaaccttgaaattttgaatttccgtaacggcagcatcattgtaaatagc
agaatgaagtttgcaaaacctgttcctcgaaatgtcagcaatgccgtgtatatcattctt
gaggacttctgtaacactgcatatcaaactatgaacttggccattgacaaatactcactg
gatgttgaatcagggtatatagctgacccatgtaaattccaagcatgcaatgagtattca
gagtgcctcataaacaagtggagcggggaaggagaatgtgtttgtaatccaggatatgtt
agtgtggatggcatgccttgtcagagtctgtgtgatctagaaatagagttttgccagaat
gatggtaaatgtgatattattcctggacaaggtgctatttgcaggtgtagagtgggagaa
aactggtggtacagaggagaacattgtgaagaatatgtttcagagcctttagtggttgga
atagccattgcatcagtagctggctttctccttgtagcttctgctgtcattttcttcttg
gcaaggacgcttagagttcagaactcaaagggtgatcaagaagaatcgtttgggagacca
aatgacagcatttcatctattgaacgtcctgtgaaatataatccaatgtacgagagtgac
attactggttacagtcactactgtaagagatatccccattactcatcaaccacatccacc
agtcctgagacctctgcagacttcagcagtgaagagattcggcacatctatgaacacagc
gagctttcgaaagaggaaatccaggatcgaataagaataattgagctttatgcaaaagac
aaacaatttgcagaatttgtgaggcaacaccagatgtctgtggacaatgtcagacaagca
aaccctacaagttaa
DBGET
integrated database retrieval system
