Xenopus laevis (African clawed frog): 108708991
Help
Entry
108708991 CDS
T01010
Symbol
itga7.S
Name
(RefSeq) integrin alpha-7 isoform X1
KO
K06583
integrin alpha 7
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
xla04810
Regulation of actin cytoskeleton
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108708991 (itga7.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108708991 (itga7.S)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108708991 (itga7.S)
04810 Regulation of actin cytoskeleton
108708991 (itga7.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108708991 (itga7.S)
04515 Cell adhesion molecules [BR:
xla04515
]
108708991 (itga7.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108708991 (itga7.S)
Cell adhesion molecules [BR:
xla04515
]
Integrins
Integrin alpha subunits
108708991 (itga7.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
CdsD_PD2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108708991
NCBI-ProteinID:
XP_041440306
Xenbase:
XB-GENE-17345398
UniProt:
A0A8J1MG08
LinkDB
All DBs
Position
2S:complement(128579135..128645886)
Genome browser
AA seq
1110 aa
AA seq
DB search
MPAELGAPLCLSCLLLLSALRIQTFNLDVTNTLTKDGEKGSLFGFSLALHKQLNPDPMSW
LLVGAPQASALPNQYANRTGGLYGCPLTTEPKDCMRLDIDRGVDTSRESKENQWLGVTVK
SQGPGGKIVTCAHLYETRQRVNQLSETRDVIGRCFVLSEDLTIREDLDGGEWKFCEGRAL
GHEMFGFCQQGISAGFTNDNHYIMFGAPGTYNWKGELRVELFNQSALALGTYDDGPYEVA
GEKSQKPEMIPVPHHSYFGFSVDSGWGVTGRNRLSFVSGAPRANHTGAVVILRRDNGSQL
IPELTLWGETLASSFGYSVAIEDLNNDGWMDLLVGSPNFFSRKEEFGGAVYVYMNQAGKL
DKSPPLRLNGSDGSMFGIAIGSLGDINQDGFKDIAIGAPYDGNGKVYIYHGSPKGLVTKP
AQILDGISVGIKTFGYSLSGGLDVDGNSYPDLLVGSLSDSVVLFRSRTVIHVLKDVIITP
QNIDLENENCKHGTGVCVELRACFSYSAVPANYNPQITLKCVFEAEADRRLQGKSSRVIF
LKRHSSDLEYQHTSTVELHKQSTSCTTATFQLQEGIKDKLRSIPVTLTYNIHNANLRGRP
SVDLLPPLMPVLSDVERNVYTTEVNFLKEGCGEDKICQSNLQLSYVFCSRVGNTNQFVPL
PVENEVPVFSLTDQKDFALKITVTNFPSEPRNPMVDGDDAHEAQLSAVFADTLSYSGVRQ
ATDGSGTSPDKEIVCISNVNGSEATCELGNPMKRDAEITFYLIVSTPGITIETTELDVKL
ELATISEQINLSAVQARAKVIIELPLSVSGGATPNRLYYSGKVRGESAMRTEEDVGSPIN
IEVTVSNRGKSLRTLGSAFLNLMWPHEMMNGKWLLYPMAIQLKEKEQSNRSMDCTPIKAI
NPLKLNTVAGAADTMQRDQTPNSASRWSLTYPEKKKDVILDCSRGTARCVVFQCPLYSFD
QQVVLKVHGRLWNSSLLEEYPSVSSLEVVVRANITVKSSIKNLVLRDATTQINVMLYSDY
GVAALGGIPWWIILIAVLAGILLLALLVFILWKCGFFKRSNAQAKYTTNYYQAQLGVQPS
EAGRQRLRPSCVAFSRGDASKKRSCRSTMP
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagagctgggtgctcccctctgcctctcctgcctgctactgctctctgcactc
aggatacaaactttcaatctggatgtcaccaacacactgaccaaagatggggaaaagggc
agtttatttggcttctcactggcccttcacaaacaactgaatcctgaccctatgagctgg
cttttggttggagctcctcaggcttcagcattaccaaatcaatatgccaatcgtactgga
ggtctctatggatgtccacttactacagagccaaaggactgtatgcgacttgatattgac
cgtggagttgatacatctcgggagagcaaggaaaaccaatggcttggggtcactgtgaag
agccaaggccctggggggaaaattgtgacatgtgcgcacttgtatgaaactcgccagaga
gtaaatcagctttctgagactcgggatgtgattggccgatgttttgttctgagtgaagat
ttaaccataagggaagacctagatggaggggaatggaagttctgtgagggtcgagcattg
ggacacgagatgtttggattctgccagcaaggaatatctgctggattcaccaatgacaat
cattatatcatgtttggggccccaggcacatacaactggaagggggagctccgggtggag
ctatttaatcagagtgccctggccctgggtacttatgatgacggcccatatgaagttgct
ggagagaaaagccagaaaccagaaatgatacctgtgccacaccacagttattttggtttc
tcagtcgattcagggtggggggtaactgggcggaacagactgagctttgtaagcggggca
ccccgggcaaatcatacaggtgctgtggttattcttcggcgagacaatggaagccagctc
atcccagaattgactttatggggagagacactggcatcatcatttggctattctgttgct
attgaggatctcaacaatgatgggtggatggatttgcttgtgggctcccctaatttcttt
tcacggaaagaggagtttggtggtgctgtttacgtgtatatgaatcaggctggaaaactg
gataaatcaccccccctcagactcaatggctctgatggttctatgtttggaatcgcaatt
ggcagtttgggagacattaaccaggatggtttcaaagatattgccattggagctccttat
gatggaaatgggaaagtttatatttatcatggcagccccaaaggattagttaccaaaccg
gcacagattctggatggtataagtgttggaataaagacttttggatactctctgtctggg
ggattagacgttgatggaaactcctatcctgatctgttggtgggatctctttctgactca
gtggtgctatttaggtcacgcactgtcatccatgtcctgaaggatgtcattatcactcca
caaaatattgacttagagaatgaaaactgcaagcacggcactggagtctgtgtggaacta
agagcgtgtttcagttacagtgctgtccctgcaaattataatcctcaaatcactcttaaa
tgtgtctttgaggctgaagcagacaggagacttcaaggaaagtcaagccgagtgattttc
ctaaagcgccactccagtgacttagaataccaacatactagcactgtggagctgcacaag
caatctactagctgtactactgccacattccagctacaggagggtatcaaagacaagctt
cggtccattccagtgacactgacgtacaacatacataacgcaaatctcaggggccggcca
tctgtggacctattaccccctctcatgcctgttctgagtgatgtagaaagaaatgtctat
accacagaggtgaattttctcaaagaaggctgtggagaagacaagatctgtcagagtaac
ctgcagctcagctacgtcttctgttcccgtgtaggcaacacaaaccagtttgtgccactg
ccagtggaaaatgaggttccagtgttttctctgaccgaccagaaggactttgcccttaag
attacagtcactaactttccatcagagcccaggaatccaatggtggatggagatgatgct
catgaagcccagctgagtgcagtctttgcagataccctgtcttactctggtgtgcgccaa
gccactgacggctcaggcacatctccggacaaggaaatagtctgcatttccaatgtgaat
ggttcggaggcgacatgtgaactgggaaatcccatgaagcgggatgctgagatcactttt
tacctgattgttagcacccctggaattactatagagaccacagagttggatgtgaaactt
gaactggccacaataagtgagcagatcaacttgtcagcagtacaggccagagccaaggtg
atcattgaacttccattgtctgtgtctgggggggcgactccaaacagactgtattatagc
gggaaagtgagaggtgaatccgcaatgcgaacagaggaagatgtgggcagcccaataaat
attgaagtgacagtctctaacagggggaaatccttacgtacactgggttctgccttcctg
aacctcatgtggccacatgaaatgatgaatgggaagtggcttctgtaccccatggcaatc
caacttaaggaaaaggagcagtctaatcgcagcatggactgcaccccaattaaagccatc
aatcccctaaaactgaacacagttgcaggagctgcagatacaatgcaaagggatcaaaca
ccaaattcagctagtcgatggtctctaacttacccagaaaagaaaaaggacgtcattctg
gattgctcgcgaggtactgctcgttgtgttgtcttccaatgcccactctacagctttgac
cagcaggtggtgctaaaagttcatggtcggctctggaacagcagtttattggaggaatac
ccatctgttagttccttggaagtggttgtcagagcaaacattactgtaaagtcctctatc
aagaacctggttctgagagatgccaccacacagataaatgtgatgctgtattcagactat
ggagtggctgctcttggaggcattccctggtggattatccttattgcagtgctggctgga
atactgctgctcgctcttcttgttttcatcttatggaagtgtggtttcttcaagaggagc
aatgcacaagccaagtatactacaaactactaccaggctcagctgggggtacagccttcc
gaggcaggcaggcagaggttgaggcctagctgtgtggctttttcaagaggagacgcctcc
aagaagagaagctgccgcagcaccatgccgtga
DBGET
integrated database retrieval system
