Xenopus laevis (African clawed frog): 108709012
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Entry
108709012 CDS
T01010
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108709012
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108709012
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
108709012
NCBI-ProteinID:
XP_041440424
UniProt:
A0A8J1MFC5
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Position
2S:143135012..143246298
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AA seq
964 aa
AA seq
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MAQFYYKRSSNSPYQDRIPLRIVRSESELSPSEKAYLSAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSYNVYVGDALLHAIRKEVVEAVELLLNHKK
PSREKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKYLVQKGVSVPRPHEVRCNCVE
CVSGSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSSQCKQFAKDLLVQTRSSRELEIILNYRDDGGLLDESIGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWVVKMVTCVIIGLLFPIFSCCYLIAPKSTFGLFIR
KPFIKFICHTASYLTFLFLLLLASQNINKMELQGPAPTIVEWMILPWVLGFIWGEIKQMW
DGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKFQGQRNRKEWEQWHPTLVAEAFFA
IANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYE
ADGKSQDCKGIRCKDQNNAFSTLFETLQSLFWSIFGLINLYVTNVDPKHEFTEFVGATMF
GTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNIIP
SPKSLWYLIKWIRKQICKKNMKRKPESFGAIGRRAADNLRRNNQYQEVMKNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGNKFHIQSSKMKNGVEDILETEESCK
IKEKRSRSQKNTFSLFDITTMIRPKTEASEMHKSMSNGSALLASESTKEKKRKNSFVADI
KNFGFFQSGPKSNLSVPISETIYSVSEDVANQQDTEPCENTVDLQVKDSEMHCGLNVCKS
NEQYDLPPSIENTSEILSQEPSDNHGSVVLNEPSTGALKQTDLPADENSTMVESTKEEDS
ITRL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattttactataaaagaagctccaactcgccctaccaggaccggattcctctt
cgcattgtgcgttcagaatctgagctctccccatctgagaaagcatacctgagtgctgta
gagaaaggggactatgccagtgtaaaacaagcactcgaagaagcagaaatatattttaag
atcaatattaactgcatcgatcctttgggaagaactgctttacttattgccattgaaaat
gaaaaccttgaactcattgagctacttttgtcttacaacgtctatgttggtgatgcgtta
ctgcatgctataagaaaggaagttgtggaagcagtagaactacttttaaatcataagaag
ccaagtagagaaaaacaggtccctccaatcctcctcgataaacagttctcagaatttaca
ccagatatcactccaataatattggctgctcatacaaacaattatgaaatcataaagtat
ttggtacaaaagggtgtttccgtgcctaggcctcatgaggttcggtgcaattgtgttgaa
tgtgtctcaggctctgatgtggatagcctccgacattcccgatcaaggctaaatatctat
agagctctatcaagtccctctcttattgcattatccagtgaagatccatttttgacagca
tttcagctgagctgggagctgcaagagttgagcaaagtggaaaatgaatttaaatcagag
tatgaggaactgtcaagccaatgtaagcagtttgccaaagatctcctagttcagacaagg
agttccagagaattggaaattattcttaactacagagatgatggtggattgttggatgaa
tcgattggcaatgaccttgctcgattaaaactagcaattaaataccgccagaaagagttt
gttgctcagcccaattgtcaacagctgcttgcctctcgatggtatgatgagtttccagga
tggagaagaagacactgggtagtgaagatggtgacctgtgttataataggacttctcttc
cccattttctcttgttgctacttaatagctcctaaaagcaccttcggactcttcatcaga
aagcccttcatcaagttcatctgtcacactgcctcatacttgacttttctgttccttcta
ctacttgcatcgcaaaatatcaacaagatggagctgcagggaccggcaccaaccattgtt
gagtggatgatattaccgtgggttttgggcttcatatggggagaaattaaacagatgtgg
gatggtggattccaggattatatccatgactggtggaacttgatggattttgtaatgaat
tccttgtatttggcaacaatttcattgaaaattgttgcatacgtcaagtttcaaggacag
cgcaatcgaaaagaatgggaacagtggcacccaacactggtggcagaagccttctttgct
attgccaacatctttagctccttgcgactgatctcactgtttacagcaaattctcacctg
ggccctctacaaatctctttagggagaatgctcctggatattttaaagtttctctttata
tattgccttgtattgctggcatttgcaaatggattgaaccaattatatttctactatgaa
gcagatggtaaaagccaagactgcaaaggaatcagatgtaaagatcagaataatgccttc
tcaacgttatttgaaacgttgcagtcactgttctggtctatttttggccttatcaacttg
tatgtgacaaatgtagatccaaaacatgaattcacagaatttgttggagccacaatgttt
ggaacttacaatgtcatctcgttggttgtgcttctaaacatgttaattgccatgatgaac
aattcataccagcttattgctgaccatgcagatattgaatggaagtttgcaagaacaaag
ctgtggatgagctactttgaagaaggagggactcttcccaccccttttaacataattcca
agcccaaagtcgttatggtatttaattaaatggataagaaagcagatctgtaagaagaac
atgaaaagaaaacctgaaagctttggagcaattgggagaagagcagctgacaatttgcga
agaaataatcaataccaggaggttatgaaaaatctggttaaaagatatgttgcggccatg
atcagggatgcgaagaccgaagaaggtttaacagaggaaaattttaaggaattaaaacag
gacatttctagcttccgctttgaggttttggggttgctaaaaggaaataaatttcatatc
caatcttcaaaaatgaaaaatggcgtcgaagatatcctagagactgaagaaagttgtaaa
ataaaggaaaaaagaagtcgatcacagaaaaacactttcagcctcttcgacataacaact
atgatccgtcccaaaacagaggcctctgaaatgcacaagagcatgagcaatgggtcagcc
ttattggcctcagaaagtaccaaggagaaaaagagaaaaaacagctttgttgcagacata
aaaaactttggcttttttcaaagtggtcccaaatcaaacttgtcagttccgatttccgag
acaatctactctgtttccgaagacgtcgccaaccaacaagacacggaaccatgtgaaaac
acggttgacttacaagtcaaagattcagagatgcactgcggactaaatgtctgtaaatca
aatgaacaatatgacctccctcccagcatagaaaatacctcagaaattctgtctcaagaa
ccctcggacaatcacggttctgtcgttttaaatgaaccttctacgggtgcccttaaacaa
accgatttgcctgcagatgaaaatagcacaatggtagaatcaaccaaggaagaagattct
ataacaagactgtga
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