KEGG   Xenopus laevis (African clawed frog): 108709018
Entry
108709018         CDS       T01010                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03410  Base excision repair
xla04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108709018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    108709018
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108709018
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 BRCT VWA BRCT_2 PARP_reg VWA_2 LIG3_BRCT PTCB-BRCT DUF6473 DUF5764
Other DBs
NCBI-GeneID: 108709018
NCBI-ProteinID: XP_041440456
UniProt: A0A8J1MFF8
LinkDB
Position
2S:complement(150425331..150529344)
AA seq 1685 aa
MTVAIFSDCVFFLKINDLSFKERKALKSTITSNNGVISFVLNQKCTHVVVNTIAFLSASQ
LKTVQKHQIQIVDSHFIWKCLEEKCLILDYQYLTAGVTPSEKEPQSWQADPEKTVFPENV
PTLQNKDELWDRDYSEFDSETFTDPPDTEVAKYSFFHKGSNVAFLELLCFPESSSFLFKI
SKVICDSNGAEPDSSFQFANTAEASCQKYEKCTEALEKQGFKRVKRIPPKVALLTSEALQ
KVLLEEAINATKLSPVVGYFVESVWTEALGHLDKILSRPVNSISLNDVSKAEGILLQVRK
ALDTGTEPGDISKAMAEFYRLIPHKKPMLVNINKKLLSTKQDLCQLIRDMVSVCETNLSK
PNPSILAKYQALRCQIEHVESDTEEFHQVSQQIRENKHCEESIKILKIFRVGKLSEATGF
QRNLGNVKSLLHASSPSHFVGILSRGLLLPKNVEDDLGLERTDIGNLGSGIYFSDSISTG
VKYSEPSVTNGARLLLVCDVALGNCKDLYKRDFSLTEAPNGFDSVHGVRQVPGRKSDFED
DEFVVYSKDQVKMRYVVQFCTAKDQVNMEHDKLPVWVEPTEEDVGEEPVQAEADPMLENL
PEPRSIKGGLQSVQGNQIPLENIHVKGRMMDLVVEVIIFQTYINKSSVPIEAKYVFPLDS
TAAVCGFEAFINGKHVIGEVKEKKQAHQEYRAAIREGHGAYLMDQDADDIFTVSVGNLPP
NATVIIKITYITELNLEYETVDFSIPGTVASWQKDKALKENTQDTVEKICVEESGVSKGC
FSLEMSVEMSFKIHSIMSYTHNILMKKTDCKAVIATEKDSSFDDGGFRLIIYLEPTFLQS
SWNQPRMWVEKHPDEDSEACMLVFLPDFETNIQSWDLTILLDCSNSMESTFQSAKQIALL
AANFFNSWLSINIISFGTSFKEFCVCPKEKNNLIPELVQFIKMAKPNMGNTELWKPLQSL
CLLAPSSGTMQNVLLISDGHIQNENRVFQILKKNAGKVRLFTCGVGATANRHMLRCLAQY
GAGFFEFFEDKSKSNWEKKMEAQLEKMNSPACTSASVKWVQFSENDPEPVQAPAHIPALF
KNSCLLVYGFAPRCTQAKLQALIDDKELDTMASTTELQKTTGTMLHKLTARAVIRDYEDG
FLHEKEHEHEMKKQQTKSLIIELSKKYSIVTQFTSFVAVEKRDAQEKPKDYVPNVLEIIS
AEVVDILPYMTWETEKNKKIGVDFPGWKENFCGCYGGPVSVDERASLDEEEESLPFSFAP
PPPPDEEEESLIYNSPAVAFSFAPPPPPPPLSVAKTFDSPTPAVPFSFAPPPPPPFSFAP
PPPPPPLALGMPFSFAPPPPPPPLALGMPFSFAPPPPPPPLPAAKSHSTDEVYSLDVALL
GAQQVSVCAPPPPPPPPGSICAPPPPGFICAPSPPAFDELLQVLEQTQLAVSMIETEPEK
AEHEGADFVRPARKKKIYYNTVEEPMGRLHGSRRCVRGEEVALSQKRERAPPVFNALLDL
QCEGSVCAPPPIRFISVTPPVALSQKRGRALPAFNALLDLQCEEGYWLLNEELGCLLNMN
VNYLIEVFLSKNGIQSLGKKGKDEVLKLIATLLVLQTICTYELVNVTFKNLMKLDESFCT
SPFYETIEKSMKWARKRDKQYPGICYRLGLGKDWDSATRKLLSIDPVDPSSDLFPAVESS
VESIV
NT seq 5058 nt   +upstreamnt  +downstreamnt
atgactgtggcaatcttttcggactgcgtgttcttcctgaaaataaatgatttatctttt
aaagagaggaaagctttaaaatccacaataacctcaaataatggagttatatcctttgtg
ctcaatcagaagtgcactcatgttgtggtgaacaccattgcctttttaagtgcttctcag
ctgaagactgtccagaagcatcagattcaaattgtggacagtcattttatatggaaatgt
ctggaagagaagtgtctgattctggactaccaatatctgactgctggtgtcacaccaagt
gagaaggaaccacaaagctggcaagcagatcccgaaaaaactgtcttccccgaaaatgtc
ccgacactgcaaaacaaggatgaattatgggacagggattacagtgaatttgattcagaa
accttcaccgacccgccagatactgaagtagcaaaatacagtttcttccataaaggttcc
aatgtggcatttttggagttactgtgctttccagaatcctcttcattcctattcaaaata
tctaaagtcatttgtgattccaacggagccgagcctgacagctcctttcagtttgcgaac
acagctgaggcgtcttgtcaaaagtatgaaaagtgcactgaagctttagaaaaacaaggc
tttaagagagtaaaacgtattccaccaaaggttgccctgctgacatctgaggctctgcag
aaggtcctgcttgaagaagccataaatgctaccaagttgtctccagttgttggatatttt
gtggaaagtgtttggactgaggctcttggccatttggataaaatcctctcgcgtcctgta
aacagcatcagtctgaatgatgtgagcaaagcagaaggcattctgctccaggttaggaaa
gctctggacacaggaacagaacctggggacataagtaaagcaatggctgagttctatcgg
cttattccccataagaaacccatgctggtcaacattaacaagaaacttttgtcaacaaaa
caagatttgtgccagcttatcagagatatggtcagtgtatgtgaaaccaacttatcaaag
ccaaacccaagtatccttgccaaataccaagccttgcgatgccaaatcgaacacgtggag
tccgacactgaggagtttcatcaggtgtcacagcaaataagggagaacaaacactgtgag
gagtcaattaaaatactgaaaatattccgtgttggaaaattaagtgaagccacggggttt
caaaggaatcttgggaatgtcaagtcactgcttcatgcatcttctccaagtcactttgtg
gggatcctttcccgtggactgctcttgccaaaaaatgttgaagatgatttgggtttagag
agaactgatattggaaatctcggaagcggaatctacttcagtgattccataagcacaggt
gttaaatattcagaacccagtgtaaccaatggggcgcgtctcttgctggtttgtgacgtg
gctctgggtaactgcaaagatctctacaaaagagacttctcacttactgaagctccaaat
ggctttgatagtgttcatggagtccgacaagtgcctggaaggaaatctgattttgaggat
gatgaatttgtggtgtacagcaaagatcaggtgaaaatgagatacgttgtgcagttttgc
actgctaaagaccaagtcaacatggaacatgacaaacttcctgtttgggttgagcccacg
gaggaagatgttggagaagaaccagtccaggcagaagcagatcccatgttggagaatctg
cctgaaccacggagcataaaaggcggcctccagagtgttcaaggcaaccagatccctttg
gaaaatattcacgtgaaaggcagaatgatggatttagttgtagaagttataatattccag
acctacataaacaaatcctccgttcccatcgaggctaaatatgtttttcccctggacagc
acagcagctgtgtgtggctttgaagcatttataaatggaaaacacgttataggagaggtt
aaagagaagaagcaagcacaccaggagtacagggctgctatcagagagggacacggtgct
tacctaatggaccaggatgccgatgacatattcacagtaagtgtcggaaacctgccccca
aacgccacagtaatcattaaaatcacttacataacggagttgaatctggaatatgaaaca
gtggatttcagcattcctggtacagtggcatcttggcaaaaggataaagctctgaaagaa
aatactcaggatacagtagaaaaaatctgtgttgaagaaagtggtgtgtcaaagggttgt
ttctctctggagatgtctgtcgagatgtctttcaaaattcacagtattatgagttacact
cacaatattctaatgaaaaaaaccgattgcaaagctgtgattgcaactgaaaaagacagt
tcatttgacgacggggggtttcggttgataatttatctagaacctaccttcctgcagtct
tcatggaaccagccaagaatgtgggtggaaaaacatcccgatgaagacagtgaggcatgc
atgcttgtgttcctgcctgattttgagacaaacatacaatcctgggatttgaccatctta
cttgattgctccaattctatggaatccactttccaaagtgcaaaacagattgctctgctt
gcagccaacttttttaattcatggctcagcataaacataatcagctttggaacaagtttt
aaggaattttgcgtctgtccaaaagagaagaacaacttaataccagagctggtgcagttt
attaaaatggccaaaccaaatatgggaaacacagaactctggaagcctttgcagtcctta
tgtttgctggctccttcctcaggcacaatgcaaaatgttcttcttatatctgatggacac
atccagaatgagaaccgtgtctttcagatccttaaaaagaatgcagggaaagtgcgtctg
ttcacctgtggtgttggtgcaacagccaatcgccatatgttgcggtgcttggctcaatat
ggtgctgggttctttgaattttttgaagataaatcaaaatccaactgggaaaaaaagatg
gaggcacagctggaaaaaatgaattcccctgcatgcaccagtgcatctgttaaatgggtg
cagttcagtgaaaatgatccagagcctgtgcaagccccggcacatataccggctttgttc
aagaacagttgccttcttgtttatggttttgctcctcgttgcactcaggccaagctacaa
gcattaatcgatgacaaagaactggacactatggcatcgactaccgaattacagaaaacc
acaggaacgatgcttcataaactgactgcaagggctgttattagagattatgaagatggg
ttcctgcacgagaaagaacatgaacatgagatgaaaaagcagcagacaaagtccttaatt
attgagctgagcaagaagtactcaattgtcactcagtttacaagctttgttgctgttgag
aaacgggatgcacaagagaaaccaaaggactatgtaccaaatgtacttgaaataatatct
gcagaagttgttgatatattaccatacatgacatgggaaacagagaagaataaaaagata
ggtgtggatttccctgggtggaaagaaaacttttgtggttgctatggaggtcctgtatca
gtggatgaaagggcatcattggatgaagaagaagaatcattgcctttcagctttgcacca
cctccacctccagatgaagaagaagaatcattgatctacaactctccagctgtagctttc
agctttgcaccacctccacctccacctccgttgtctgttgccaagaccttcgactctcca
actccagctgtacctttcagctttgcaccacctccacctccacctttcagctttgcacca
cctccacctccacctcctttggctcttggcatgcctttcagctttgcaccacctccacct
ccacctcctttggctcttggcatgcctttcagctttgcaccacctccacctccacctccg
ttgcctgctgccaagtcacactcgacagatgaagtgtacagtttggatgtggcactgtta
ggtgctcagcaagtttccgtctgtgcacctccacctccacctccacctccaggttccatc
tgtgcacctccacctccaggtttcatctgtgcaccttcacctccagcttttgacgagctg
cttcaagttctagaacagacacagttggctgtatcaatgattgaaactgaaccagagaaa
gcagagcatgagggggctgatttcgtcaggcctgctagaaaaaagaaaatctactataac
acagtggaggagccaatgggaagacttcatggttccagacggtgtgttagaggggaagag
gtagcattgtctcaaaaaagagaaagagccccgccggttttcaacgcccttttagatcta
cagtgtgagggttccgtctgtgcacctccacctatacgtttcatctctgtaacacctcca
gtagcattgtctcaaaaaagaggaagagccctgcctgctttcaacgcccttttagatcta
cagtgtgaggagggatactggctgctgaacgaagagctcggatgtctgttaaacatgaat
gtcaattacttgatagaggtgtttttatcaaaaaatggcattcagtctcttgggaagaaa
ggaaaagacgaggtgctgaaactcattgctaccctcctggtgctgcaaacgatttgcact
tatgagttggtgaatgtaacatttaagaatctgatgaagctggatgaatcattttgcaca
agtcccttttacgagacaattgagaaatccatgaaatgggcacgaaaaagagacaaacaa
tatcccggcatctgttatcgacttggattgggcaaggattgggattctgccacccggaag
ttattatccattgatccagtggatccctcctccgatcttttccctgctgttgagtcatct
gtagaatctattgtttaa

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