Xenopus laevis (African clawed frog): 108709061
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Entry
108709061 CDS
T01010
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108709061
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108709061
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
PKD_channel
Ank_3
Ank_4
DUF7801
DUF724
GrpE
MscS_porin
Motif
Other DBs
NCBI-GeneID:
108709061
NCBI-ProteinID:
XP_041440706
UniProt:
A0A8J1MH35
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Position
2S:complement(168143813..168150249)
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AA seq
858 aa
AA seq
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ILHSQQANWREIVNKKLKFPVNLVNAIHDGSLLQVQQLLQVGDGMLRQLDDTEDRSWREA
LNLAIRTGNEEIMKTLLHCVKFDFRQIHEALLVAVDTNQPHVVKMLLDRLDQEKGIKMDI
KSFSLAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVEMLMKKGHVITTPHKISCACMECS
NGRKYDLLKFSLSRINTYKGIASRAYLSIANEDAMLSAFKLSRELKRLSRKEPEFKPEYL
SLENLSQEFAVELLGMCRNQSEVTAVLNDCGDDGDEEELDNQAFEEGIPNLARLRLAVHH
NQKRFVAHPICQQVLSSIWSGKLSGWRGSNTIWKIFIACTIFISMPLLCMVYWLAPKSKV
GKILKIPVIKFLLHSASYLWFLIFLLLESMIMEQRHDIYEGRNQAIWQNSFHMIWVAGFL
WHECKEVWIEGLRSYFLDWWNFLDIVTISMYLASFSLRILVFVKGYLACLELPDSDVCFY
FTKSERNEWNTEDPQFIAEVLFAVTSMLSFTRLAYILPAHETLGTLQISIGKMIDDMIRF
MFILMIILTAFLCGLNNIYVNYPDSQTLGNFNETFQFLFWTMFQMVERTTVDMNHYVVAE
FVGRALYGLFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTLP
VPFNIIPTPKALFYFIRRVCRFICCYKPKKKQEYPPIASISNRAVGGDIFAGESRESYRL
QVIKALVQRYIDTARREFEESRRKDLGNRITELNKNVIRLQSEVKNLRRSVVDQAGSGTN
KSNENMLSQYIMKVKDSFQSYDQESINSSKESPEVTVHQNNDRGLVPEDDCPPYPEEVFT
NRVAANGETNHLHENEAM
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
attctgcattcccagcaagccaactggagggagattgtcaacaagaagctgaagttccct
gtcaatcttgtcaatgccatccatgatggaagtctcctacaggtgcaacagctgctccag
gtgggcgatggaatgctgcgccaattggacgacacagaagaccggtcatggcgagaggcc
ctcaacctggccatccgcacagggaacgaggagatcatgaagaccttgctgcactgtgtg
aagtttgacttccggcagatccatgaggcccttctggtggcagtagacaccaaccaacca
catgtggtcaagatgttactggatcggctggaccaggagaaagggattaagatggacatc
aagtccttctctttggccttttttgacaactccattgacaactcccgttttgcccctggg
gtgacccctctgaccttggcctgtgagaaggatctgtatgagattgttgagatgctgatg
aagaagggtcatgtgatcacaaccccgcacaagatctcctgcgcatgcatggagtgcagc
aatgggcgcaagtatgatctcctcaaattctccctttcccgcatcaacacctacaagggc
attgccagcagggcttacctgtccattgccaatgaggatgccatgctaagtgccttcaaa
ctaagccgtgagctgaagcgcctttctaggaaggaacctgaatttaagccggaatatctg
agcctggagaacctgagccaggaatttgctgtggaacttttgggcatgtgcaggaaccag
agtgaggtgacagcggtgctgaatgactgtggcgatgacggtgatgaagaagagttggac
aatcaagccttcgaggaggggatccctaaccttgcccggctccgtctcgctgttcatcac
aaccaaaagaggtttgtggcgcaccccatctgccagcaggtcctctcctccatctggagt
gggaaactttctggctggaggggcagcaacaccatctggaaaatcttcatcgcttgcacc
atctttatttctatgcccctcctgtgcatggtgtactggctggcacccaaatccaaggtt
gggaaaatcttaaaaatcccagtaattaagttccttcttcactccgcttcttatctgtgg
ttcctcatcttcctcttgctggagtcgatgatcatggagcagagacatgacatctacgag
ggcaggaaccaggccatctggcagaattcctttcacatgatctgggtggcaggtttccta
tggcacgagtgcaaggaggtctggatcgaagggctgcgcagttacttcttggactggtgg
aacttcttggacattgtgaccattagtatgtatctggcctccttctccctcaggattctg
gtctttgtgaagggctacctggcctgcctggaactccctgactccgacgtctgtttctac
ttcaccaaatcagaaaggaatgagtggaacacagaggacccccagttcattgctgaggtt
ctttttgcggtgaccagtatgctcagcttcactcgcctggcctacatcctacctgcccac
gagactctggggactctacagatttctattggcaaaatgattgatgatatgatacggttc
atgtttatcctgatgattattctcactgcctttctgtgtggactgaacaacatctacgtg
aattaccccgactcccaaacactgggaaacttcaacgagaccttccagttcctgttctgg
acaatgttccagatggtggagaggacgacggtggacatgaatcactatgtcgtggctgaa
tttgtgggtcgggctctgtatggtctcttcaccatcgtcatggtcattgtgctgctcaac
atgctcatagccatgatcaccaactccttccagaagatcgaggacgatgctgacgtggag
tggaaattcgctcgctcaaagctgtatctttcctacttcagagaaggtctgacgctcccc
gtgcccttcaacatcatccccacacctaaagccctcttctacttcataaggagagtgtgc
agatttatatgctgttacaaacccaagaaaaagcaagagtaccccccaattgccagcatt
tccaacagagcagtaggtggagatatatttgctggagagagtcgggagtcgtaccgcctg
caggtgataaaggccttggtgcagagatacatagacaccgccaggagggagtttgaggag
agcaggaggaaagatctgggcaaccgcatcactgagctgaacaagaacgtgatccgcctt
cagtcagaagtgaaaaacctgagacgttcggtggtggatcaggctgggtctggcacaaac
aagagcaatgagaacatgctgagccagtacatcatgaaggtgaaggacagcttccaaagc
tacgaccaagagtccatcaactccagtaaggaatcaccagaagtcaccgtccaccagaac
aatgaccggggcctcgtgccagaggatgactgtcccccctaccccgaggaggtctttacc
aacagagtggccgcgaatggggaaaccaatcatctgcatgagaatgaggctatgtag
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