Xenopus laevis (African clawed frog): 108709238
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Entry
108709238 CDS
T01010
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108709238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108709238
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
108709238
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
108709238
NCBI-ProteinID:
XP_018104389
UniProt:
A0A1L8H599
A0A974DH32
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Position
2S:complement(20611194..20757076)
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AA seq
460 aa
AA seq
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MRIPVDTSTSRRFTPPSATLSPGKMSEPIALNVADSSAALVGKLRSTDRNMVDVLSDHPG
ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGEVPDGTLVTVMAGNDENYSGELRNA
TAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHR
QKLDEQTKPGNLSFSERLSELEHLRRTAMRVSPHHPTPTPNPRATLNHSTAFNPQPQGQI
QDTRQVQASPPWSYDQSYQYLGSIATQSVHPATPISPGRASSMTSLSAELSSRLSGASDL
TAFSDPRVGIDRQFSTLPSISDPRMHYPGAFTYTPTPVTSGIGIGMSAMTSATRYHTYLP
PPYPGSSQAQSSPFQTSSPPYHLYYGTSAGSYHQFSMMSGGERSPPRILPPCTNASTGST
LLNPNLPNQSDVVEAEGSHSNSPTNMGTTPRLEEAVWRPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagataccagcaccagccgccgcttcacgccgccctccgccactctg
agtccggggaagatgagcgagccgatagcgctaaatgtcgcggacagcagcgccgccctg
gtgggcaaactgagaagcacagaccggaatatggtggatgtactgtccgatcatccggga
gaactggtgcgcacagacagccccaactttctctgctcggtgcttcccacacactggagg
tgcaacaagaccttgcccatcgctttcaaggtggtggccttgggagaagttccagatggg
acactggtgacagtgatggctggcaatgatgagaattactccggtgaattaaggaatgcc
acagcagccatgaaaaatcaagtggcccgcttcaatgacctgagatttgttggacgatct
ggaagaggaaaaagtttcaccctgactatcaccgtcttcaccaatcccccgcaagtggct
acctaccatcgagccatcaaaatcacagtggatggaccacgagagccacggcgacacaga
cagaaattagatgagcagacaaaaccgggcaacttgtccttttctgaacgactcagtgaa
ctagaacatttgcgccgaacagccatgagggtcagcccacatcacccaactcccacgccc
aacccacgtgccaccctaaatcattccacagcttttaatcctcagccgcagggtcagata
caagatacaagacaagtccaggcatctcctccttggtcgtatgatcagtcctaccagtac
ctgggatccatagcaactcagtctgtacaccctgctacccctatatcgccgggaagggca
agcagtatgacgtctctcagcgctgagctctccagccgactatcaggagcctcagaccta
acagcattcagtgatcctcgagttggcattgaccgtcagttctccactcttccttccatc
tctgatcctcgtatgcactacccaggggcttttacctacaccccaaccccggtcacttca
ggtataggaattggcatgtcagcaatgacctctgctacaaggtaccacacctacctaccc
cctccatatcctggatcttctcaggcacaaagtagtccctttcagaccagttccccacct
taccatctctattatggaacatctgctggatcctaccatcagttctctatgatgtcagga
ggagaacgatccccgcctcgcatcctcccaccttgcacaaacgcttccacggggtccact
ctcttgaaccctaaccttccaaaccaaagcgatgtagtggaggccgaaggaagccatagt
aactctcctaccaacatgggaaccaccccaaggcttgaagaagctgtatggcggccatat
tga
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