KEGG   Xenopus laevis (African clawed frog): 108709287
Entry
108709287         CDS       T01010                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X5
  KO
K08518  syntaxin-binding protein 5
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108709287
Membrane trafficking [BR:xla04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108709287
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108709287
SSDB
Motif
Pfam: LLGL WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st Lgl_C Synaptobrevin Beta-prop_NUP159_NUP214 PEP5_VPS11_N WD40_like Beta-prop_VPS8 Peptidase_M61
Other DBs
NCBI-GeneID: 108709287
NCBI-ProteinID: XP_018104485
UniProt: A0A8J0UBJ3
LinkDB
Position
2S:complement(28033411..28185324)
AA seq 1157 aa
MKKFRKVLDGLTVGGGTVAAAGGCPVYSTGPTGVIVSPRDTEVQENLTSDQFHVCKTVRH
GFPHQPTALAFDPVQKILAIGSRTGAVRILGRPGVDCHCHHDSGAAVLHLQFLINEGALV
SACADETLHLWNLRQKRPAVLHSLKFNKERITCCHIPFQSKWLYVGTERGNTHIVNIESF
VLSGYVVMWNKAIELSTKNHPGPVVHLSDTPRDEGKLLIGYESGTIVLWDLRCKRADLRF
YYDEAIHSIAWHHEGKQFMCSHSDGSLTVWNVKNPSRPSQITVPHGKSQRDGRKPESCKP
ILQVEYRTCKNSEPFIIFSGGLSYDKACRRPSLTIMHGKSITVLEMDHPIVDFLTLCETP
YPNEFQEPYAVAVLLEKDLIIVDLTQSNFPIFENPYSMDIHESPVTCTEYFADCPPDLIP
VLYSVGAKHKKQGYSNKEWPLTGGAWNLGSQTYPEIIVTGHADGSVKFWDASVFTLQMLY
KLKTSKVFEKQKPGEEKQTAEIVEEDPFAIQMISWCPESRVLCVAGVSAYVIVYTFSKHE
VLMDIASLEVRLQCEVEDIITPDPDTISPFPEPTSQPLCSKSKNLSGSANTVTCEGPLKD
SIPCLSVKSRPVRMPPGYQAELVIQLLWVDGEPPQQITSLAVSSAYGLVAFGNCNGLAVV
DYIQKTVLLSMATIDLYGSSDPYQRQPRSPRKSKQFTAGLTELTDSPVSLELERCKSPTS
DHVNGHCTSPTSQTCSSGKRIITADGVKANRRGPGRPPFRKAQSAACMEISLPVTSEESR
ESSFSRSRSSSVSSIDKDSKEVITTLYFMESFARKNDQSLSPCLWTGTSLGMVLLISINM
PSTEEQRLTEPVMVSPSGTVLMLKGAILTFSCLDCTGTYIHPPYEIWRDPNSTEENERTR
KRKLVTFSPSSSQDMGDHQFAVICSEKQAKVFSLPSQTCLYVHNITETSFLLRADVVTMC
NNVLLACFCANGHIMTISLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLASPTEIQ
RITYSQEMCDSLQEMLGDLFSLVQTPEAQNKGFLTVLFGGSAQTFDREELFGEATAGKAS
RSLAQHIPGPGGFEGVKGAATGVAGDLHRARIALDERGQRLGELEDTTAAMMSSAEAFSK
HAHELMLKCKDKKWYQF
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgaagaagtttcgtaaagtcttggatggtctgacagttggtggaggaactgtagcagca
gcaggtggctgccctgtgtattcaactggtcccacaggagtgatagtgtcccctcgagac
acagaagtccaggagaacttgacttctgaccagtttcatgtctgcaagactgtacgacat
ggatttccacatcaacccacagctttagcttttgatcctgtacagaagatactggcgatc
gggtcacggactggagctgtacgaatattgggccggcctggagttgattgccattgccac
catgacagtggggcagctgtactgcatctacaatttctaattaatgagggtgccttggtt
agtgcgtgtgcagatgagacgcttcatttgtggaacctgaggcagaaacgaccggctgtc
cttcattcacttaaatttaataaggaacggatcacatgttgccacataccgttccagagt
aagtggctctatgttggaacggaaagggggaacacgcacattgtaaatattgaatccttt
gttctctctggatatgttgtcatgtggaacaaagcaatagaattatcaacaaaaaatcac
ccaggtccagttgtacacttaagcgatactcctagagatgaggggaagttactaataggt
tatgaaagcggaacaatagttctctgggatttgcgatgtaaaagagccgacctaagattt
tattacgacgaggccattcactctattgcctggcaccatgaagggaagcagtttatgtgc
agtcattcagatggcagtctcacggtatggaatgtaaagaaccccagcagaccctctcag
atcactgttccccatgggaaaagtcaaagagatgggaggaaacctgaatcatgtaaacca
attttacaagtagaatacaggacatgtaaaaacagtgaaccctttatcattttctctgga
ggactatcctatgataaagcctgtaggagacccagtttaactatcatgcacggaaaatcc
atcactgtactggaaatggatcatccaattgtggactttttaactctttgtgaaactcca
taccccaatgaattccaggaaccatatgctgtggcagttctactggagaaggaccttatc
attgttgatcttacccagagcaatttcccaatctttgagaatccctactccatggatatc
catgaatcaccggtcacctgcactgaatatttcgcagactgtcctcctgatctgattcca
gtgctttattcagtaggtgctaagcacaaaaagcaaggctacagcaacaaggaatggcca
ttaaccggaggagcctggaacctgggaagccaaacctatccggaaatcattgttacaggg
catgctgatggctcagtaaaattttgggatgcttctgttttcacgctccagatgttatac
aaactgaaaacctcaaaggtatttgagaaacagaagccaggagaagagaaacaaacagca
gaaatagtggaagaggatccatttgccatccagatgatctcctggtgccctgagagcaga
gtcctctgtgtagctggtgtctcagcttatgttatagtttatacgtttagcaaacatgaa
gtgctgatggatatagcgtccttagaagttcggctgcagtgtgaggttgaagacatcatt
actcctgatccagacactatctctccatttcccgagcccacttctcagcctctgtgctca
aagagcaagaatctatcaggcagtgcaaacacagtgacatgcgaggggcccctgaaagat
agtatcccatgcctaagtgtgaagagtcgcccggtgaggatgcctccagggtaccaggca
gagcttgtcattcagctcctatgggtggatggagagccgcctcagcaaattactagtcta
gctgtgagctctgcttatggcctagttgccttcgggaactgtaatggcttagcagtggtg
gattatatccagaaaaccgttttactaagcatggcaactatcgatttatatggctccagt
gacccctatcagaggcagccacgttcaccacggaagagtaagcagttcactgcaggtcta
actgaacttacagacagtcctgtttccctggagctggagcgctgcaaatcccccacttca
gatcatgttaacggccactgcacgagtcctacttctcagacttgcagttcgggtaaacgc
atcatcactgctgatggagtgaaagccaatcgcagaggtccaggtcggccaccctttcgg
aaggcgcagtctgcggcctgtatggagatatccttgccagtcacttccgaagaaagccgt
gagagttccttcagccgatctcggagctccagcgtgtccagcattgacaaggattctaag
gaggtcattactactctctatttcatggagtcctttgcccgtaagaatgaccagtcactc
tctccatgtctgtggacggggaccagccttggaatggttttgctcatttctattaacatg
ccttctacggaggagcaaagactgacggagccagtgatggtgtcgccaagtggtactgta
ttaatgctgaagggagccatactgaccttctcctgcttggactgcaccggcacctatata
cacccaccttatgagatctggagagaccccaacagcacagaggagaatgagagaacacga
aaacggaaactggtcacattctcaccatcatcttcccaggatatgggagatcaccagttt
gccgttatctgctcagaaaaacaagccaaagttttctcacttccctctcaaacatgtttg
tatgtgcacaacatcactgaaacctccttcctcctgagggcagatgtggtcaccatgtgc
aacaacgttttgctggcatgtttctgtgcaaatggccatattatgacaataagcctccca
agcctgcgtccattgctggatgtcaattacctgcccctcacagatatgagaatagcacga
actttctgcttcactaatggggggcaagctctgtatctggcgtctcccaccgagatccag
cggataacctacagccaggagatgtgtgacagtctgcaggagatgctgggggacctgttc
tcactagtacagacaccagaggctcagaacaagggcttcttgactgtcttgtttggtgga
agtgctcagacctttgacagagaagagctctttggtgaggccacagcaggaaaagcctct
cggagccttgcacagcatatcccagggccgggaggatttgagggggtcaaaggggcagca
actggggttgccggtgacttgcacagagctcgcattgctttggatgagagaggacagagg
ctgggagagctggaagacactacagcagctatgatgtccagcgctgaagctttttctaaa
catgcacatgagctgatgctgaaatgcaaagacaagaagtggtaccagttttaa

DBGET integrated database retrieval system