Xenopus laevis (African clawed frog): 108709290
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Entry
108709290 CDS
T01010
Symbol
boc.S
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108709290 (boc.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108709290 (boc.S)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
Other
108709290 (boc.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
Ig_5
Ig_4
C2-set_2
SBF
DUF7042
Y_Y_Y
Fn3_VIN3
DUF7359
Motif
Other DBs
NCBI-GeneID:
108709290
NCBI-ProteinID:
XP_018104487
Xenbase:
XB-GENE-17345786
UniProt:
A0A8J0UJI6
LinkDB
All DBs
Position
2S:28524862..28557793
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AA seq
1072 aa
AA seq
DB search
MILRCNNFVAATVCCCLLSSFCCLAQSVRAPQFLVQPLSTFQKFGGSVTLSCAVEPASAS
VSWQLNGAELEQPGVLVSGGTLVIASLNNDTAGRYQCIGRTAAGAIASVPAIVTLANLQD
FKFDTQHVIEVDEGNTAVIACNLPESHPKAQVRYSVKQEWLETSRDNYLIMPSGNLQIVN
ATQEDEGTYKCAAYNPVTQEVKTSVSSDRLRVRRSTAEAARIIYPPNAQTIIVTKGQSLI
LECVASGMPPPRITWSKDGIDVSWHNKTRLLLSNLLIDATGEEDSGTYTCTANNGIGEGG
SAFIFYNVQVFEPPEVSMELSQQIVTWGQSAKFTCEVKGNPQPSVIWLRDTVPLISSTKH
RMSRKLLRLINVGPEDGGVYQCMAENEVGSAQAMALLITTRSGSLLDLEREAPTSSPLTE
DRQLLLKAQYKPRPPTPLLPAQCPNTKEHVVPPDAPVILSSPRTSKTDFYELVWRPRNVG
GAPILFYIIKHRKQVANSSDEWTVSRVPGPQHRLTLTKLDPGSLYEVEMAAYNCAGEGQT
AMVTFRTGRRPKPEIVASKEIQIQKDDPGTSTQSSNQSDNNRLSPPEAPDRPTISMASET
SVYVTWIPRGNGGFPIQSFRVEYKKLKQPGDWILVTRDIPPSRLSVEITELEKGTSYKFR
VRALNILGESQPSAASKLYMVSGYSNRVYERPVTGPYITFTEAINETTIMLKWMYTPASN
NNTPIHGFYIYYRPTDSDNDSDYKKDVVEGDRYWHSISHLQPETSYDIKMQCFNEGGESE
YSNVMICETKARKSSQPGRSLIPMAPSPQPPHSNGKGAVGTATVARSSDVPYMIVGVLGS
IVLIIVAFIPVCLWRAWSKQKQTTDIAFPSAGILTSSCQYTMVPLRGVSTISNFPYANGG
VVNGTCPSVNSSHNELKPREYESEAEHQDEANSLLEEMVSGHKDLTECHNPRPLCHPPGE
GMSVYQPCENDTCDMKELPPDGLHLQDETLVGHSLAKSNKECPILSLPKEPGMCQGCMFP
LPPVESTKDPACSLSDGECHQNPVWSSNVEGNPDCRRSSTFHPHTPTQGPAT
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattctcagatgtaacaactttgtcgctgctacagtttgctgctgcctcctatcctcc
ttctgctgcctcgctcagtccgtccgagctccccaattcctggtgcagccactctcgacc
ttccagaagtttgggggttctgtcaccctgagctgcgccgtagaaccggccagtgcctcc
gtctcctggcaactgaatggggcggagctagagcagcccggggttctggtatctggaggc
acattggtcattgccagccttaataacgacaccgctggaaggtaccagtgtatcggccgg
acggcagcaggagccatcgccagtgtacccgctattgtcacccttgccaacctgcaggac
tttaagttcgacactcagcatgtgattgaggtggatgaggggaacacagcggtgatcgcc
tgtaacctgccggagagtcaccccaaggcccaggtgcgctacagcgtcaagcaggagtgg
ctggagacttccagagacaactatcttatcatgccttcggggaacctgcagatagtgaac
gctacacaagaggacgaggggacatataagtgcgctgcgtataaccctgtgacgcaagaa
gtcaaaacatccgtttccagtgatagactccgtgttcgccgttccaccgctgaggcggca
cgtataatttacccccccaatgcccagaccatcatcgtcaccaagggccaaagcctgatc
ctggaatgcgttgccagcgggatgccacctcccaggattacttggtccaaggacggaatt
gatgtttcttggcacaataaaactcgcctccttctcagtaacttgctgattgacgccacc
ggtgaggaagactccggcacctacacctgcaccgccaacaacggcatcggagagggaggc
tccgcctttatattttacaatgtgcaagtgttcgagccaccagaggtcagtatggagctg
tctcaacagatagtgacctggggtcagagtgcaaagttcacatgtgaggtcaagggtaac
ccacagccctctgttatatggctgagagacactgtgcccctgatctccagcaccaaacac
agaatgtcccggaaacttctgcgtctcattaatgtgggaccagaggatgggggagtgtac
cagtgtatggcggagaatgaagtggggagtgcacaggccatggccctcctgataaccact
agatcagggagcttgctggatctggaaagagaggccccaacatcttctccattgacagag
gaccggcagctgctgctgaaagcccagtacaagcctcgacctccgacccccctgctaccg
gcccagtgccccaacaccaaggaacatgtggttcctcctgatgctcctgtcatacttagc
tcccctcgcacctctaagactgacttctatgagttggtgtggaggcccagaaatgttggg
ggagccccaatcttgttctacatcatcaaacaccgcaagcaggtagcaaattcttcagat
gagtggactgtttctcgggttccagggccacagcaccgcttgaccctgaccaaactagac
cctggaagtctgtatgaggtggagatggcggcctacaactgcgctggggagggacaaact
gccatggtgaccttccggacaggacgccgccctaaaccagaaatagtcgccagcaaagag
attcagatccagaaggacgaccccgggaccagcacgcagagcagcaaccaatcagacaac
aatcgcctttcccccccagaagcacccgaccgccccaccatctcaatggcttccgagaca
tcggtgtatgtcacctggatcccacgaggaaacggcggattccccattcagtccttccgg
gtggagtacaaaaagctgaagcagccgggagactggattttggtgactagagacatccct
ccctcccgcttgtcagttgagataacagaattggagaaaggcacctcctacaaattccgc
gtccgggccctcaatattctgggggagagtcagcccagcgcagcctccaaactgtacatg
gtgtccggctacagtaaccgggtatacgagcgaccagtgacgggaccctacattacattt
acggaagcgatcaatgagaccaccattatgctcaagtggatgtacaccccagccagcaac
aacaacacacccatccacggattctacatctattaccgacctaccgacagtgacaacgac
agcgactacaagaaggatgtggtggaaggggatcgctattggcactctatcagccatctg
cagcccgaaacctcctatgacattaaaatgcagtgttttaacgagggaggagagagcgaa
tacagcaatgttatgatctgtgagactaaagctcggaagtcttctcagcctggccgctca
ctgatacccatggcaccttctccccaacctcctcacagcaatggcaaaggtgctgttggg
acggctacagtggctcgttccagtgatgttccgtacatgatcgtcggggttcttggctcc
attgttcttataatcgtagctttcatccctgtctgtttgtggagagcctggtctaagcag
aaacaaacaacagatattgcattccccagcgctggtatcctgacgtcctcttgccagtac
accatggtgcctctaagaggggtctctaccatcagcaacttcccctatgctaatggcggt
gtcgtgaatggcacttgcccatctgtaaactccagtcataatgagctgaagccaagagag
tatgaatccgaggctgagcatcaggatgaagctaacagcttactggaagagatggtttct
gggcacaaggacctaacagaatgtcacaatcctaggccgttgtgccacccacccggcgag
ggcatgtccgtgtaccagccttgtgagaatgacacatgtgacatgaaggaacttcctcct
gatgggcttcacttgcaggatgagaccttggttgggcactctctggcaaagagcaacaag
gagtgtcccattctctcactgcccaaagagccaggtatgtgccaaggttgtatgttcccc
ttgcccccagtggagagcacaaaggatccagcctgctcactgtcagatggagaatgtcat
caaaacccagtttggagcagtaatgtagaagggaatccagactgtcggaggagcagcact
tttcaccctcacactccaacacaaggacctgctacttaa
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