Xenopus laevis (African clawed frog): 108709324
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Entry
108709324 CDS
T01010
Symbol
supt4h1.S
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108709324 (supt4h1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108709324 (supt4h1.S)
03019 Messenger RNA biogenesis [BR:
xla03019
]
108709324 (supt4h1.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108709324 (supt4h1.S)
RNA polymerase I system
108709324 (supt4h1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108709324 (supt4h1.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
108709324
NCBI-ProteinID:
XP_018104551
Xenbase:
XB-GENE-17343285
UniProt:
Q5HZ97
A0ABE4MAK2
LinkDB
All DBs
Position
2S:32336477..32346427
Genome browser
AA seq
117 aa
AA seq
DB search
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
VAMMSPDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVVYKSRDTAIKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggagactgtacccaaagatctgaggcatctgagggcttgtttgttgtgctca
ttagtgaagacaattgaccagtttgaatatgatggctgtgacaattgtgatgcctatctg
cagatgaaggggaatcgggagatggtttatgattgcacaagttcgtcgtttgatgggatt
gtggccatgatgagtccagatgacagctgggtttccaagtggcagaggataacaaacttt
aaaccaggagtgtatgcagtgtctgtcacagggcgtcttccgcaaggcattgtgcgagag
ttaaagagccgcggcgtggtatacaaatccagagacactgccatcaagacgtga
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