Xenopus laevis (African clawed frog): 108709351
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Entry
108709351 CDS
T01010
Symbol
pafah1b1.S, lis1, lis2, mdcr, mds, pafah
Name
(RefSeq) platelet activating factor acetylhydrolase 1b regulatory subunit 1 S homeolog
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00565
Ether lipid metabolism
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
108709351 (pafah1b1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108709351 (pafah1b1.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108709351 (pafah1b1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108709351 (pafah1b1.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108709351 (pafah1b1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_SPT8
LisH
LisH_PAC1
Beta-prop_RIG_2nd
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
LisH_2
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
108709351
NCBI-ProteinID:
NP_001353366
Xenbase:
XB-GENE-1002849
UniProt:
A0A1L8H632
LinkDB
All DBs
Position
2S:38832478..38864146
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSE
TKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDK
TIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagaggcaaagagatgagctaaatcgagcaatagcggattacctacgt
tccaatggttatgaagaggcctattctgtttttaagaaggaggcagaacttgatatgaat
gaagagttagataagaagtatgcaggactcttggagaagaaatggacatctgttatcaga
ttacaaaaaaaggttatggaattagaatccaaattaaatgaagcaaaagaagagtttaca
tctggaggacctataggccaaaagcgagaccccaaagaatggatacctcgcccacctgaa
aaatatgcactcagtggtcatcggagtcctgtcactcgtgttatttttcatccagtgttt
agtgttatggtcacggcatcagaagatgcaacgatcaaggtgtgggactatgagactgga
gattttgaacgcacactcaaggggcacacagactctgtgcaggatatatcttttgaccat
tctggaaagctgctggcctcttgttctgcggatatgactattaagctatgggatttccaa
ggttttgagtgcatcaggactatgcatggtcatgatcataatgtttcctcagtagccatt
atgcccaatggagatcatatagtgtctgcctcaagggataaaaccattaagatgtgggaa
gttcagactgggtattgtgtgaagaccttcacaggacacagagagtgggttcgcatggtg
aggccaaaccaggatggtacacttattgccagctgttccaatgaccaaactgttcgggtt
tgggttgtagctacaaaggaatgcaaagcagaacttagagagcatgagcatgtggtagaa
tgcatttcttgggcaccagaaagctcatattctaccatatccgatgctacaggatctgag
actaaaaaaagtggtaaacctggtccttttctcctgtctggttccagagataaaactata
aagatgtgggacattagcattggcatgtgcctaatgacacttgttggccatgataattgg
gtgcgtggagttcaattccatccaggaggaaagtttattcttagttgtgctgatgataaa
actatacgcatttgggactacaagaacaaacgctgcatgaaaacccttaatgcgcatgaa
cattttgttacctctttggatttccacaagactgcgccgtatgtggtgactggaagtgta
gatcaaacagtaaaagtgtgggagtgccgttga
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