Xenopus laevis (African clawed frog): 108709429
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Entry
108709429 CDS
T01010
Symbol
mid1.S
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108709429 (mid1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108709429 (mid1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108709429 (mid1.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108709429 (mid1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
TRIM_CC
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
108709429
NCBI-ProteinID:
XP_018104722
Xenbase:
XB-GENE-17337941
UniProt:
A0A1L8H6I9
A0A974DIH5
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All DBs
Position
2S:51249048..51410442
Genome browser
AA seq
668 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCANNESIESINAFQCPTCR
YVITLSKRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAYDTTNSMTSCEKVVC
QFCDQDQAREAVKTCVTCEVSYCEDCLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHE
DEKVNMYCVTDDQLICALCKLVGRHRDHQVAALGDRYDKLKQSLESNLSNLIKRNTEMEM
LLSKLIQTCQQVEVNASRQEAKLMEESDQLIEIIQQRRQLIGTKIKEGKVVRLRKLAQQV
ANCKQCIERSTSLISQAEQSLKENDHARFLQSAKNITERVSMATASSQVLIPEINLNDTF
DTFALDFSREKKMLECLDYLTAPNPPVIREELCTASYDTITVHWTSDDEFSVVSYELQYT
IFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKL
KTNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFLDSG
RHYWEVVISGSTWYAIGIAYKSAPKHEWIGKNTASWVFCRCNNNWAVRHNSKEIPIEPSP
HLRRVGILLDYDNGSLSFYDALNSIHLYTFDIAFAQPVCPTLTVWNKCLTILTGLPIPDH
LDCLEQLA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagatcca
ctgctgctgccttgcgctcacagcctgtgttttaactgtgcgcatcgcatccttgtttcc
cactgtgccaacaacgaatccatagaatctattaacgccttccagtgccccacatgccgt
tatgtcatcacactcagcaagcgtggcttagaggggctaaagaggaacgtgactttgcag
aacatcattgacagatttcagaaagcctcagtgagcggacccaattctcctagtgaaacg
cgccgagaacgtgcttacgataccactaacagcatgacatcatgcgagaaagtagtctgc
cagttctgtgatcaggaccaggcaagggaggctgtgaaaacgtgtgtaacctgtgaagtt
tcatattgtgaggactgtttaaaagctactcacccaaacaagaaaccattcactggtcac
cgtctaattgaacccatcccagattctcacataagagggttaatgtgcctggaacatgag
gacgaaaaagttaatatgtactgtgtgacagatgatcagttaatctgtgccttgtgtaaa
ttggttgggaggcatcgagatcatcaagtcgctgcgcttggtgacagatacgacaagcta
aagcaaagcctggagagcaacctaagcaacctcatcaaaaggaacacggaaatggaaatg
ctgttgtctaagcttattcagacttgccagcaagtggaggttaatgcatcacgacaagaa
gccaaattaatggaggagagtgaccaattgattgaaattattcaacagagaagacaacta
attggaacaaaaataaaagaaggaaaggtcgttaggttacgaaaactggcacagcaggtt
gccaactgtaaacagtgcattgagcgctccacatccctaatctcacaggcagaacaatcg
ctaaaagaaaatgatcatgctcgcttccttcaatcagccaagaatatcacagaaagagtt
tcaatggcaacagcatcctctcaagtgcttattccagaaatcaacctgaatgacacattt
gacacatttgcattggatttttcaagagagaagaagatgttagaatgtcttgattatctg
acagcaccaaatccccctgtaattagagaggaactatgcactgcttcctacgacaccatt
actgtgcattggacatctgatgatgagtttagtgtggtttcctatgagctacagtacacc
atcttcactggacaagctaatgttgttagtttgtgtaactcagccgacagctggatgatt
gttcccaatatcaaacagaaccattatacagttcatggcctgcaaagtggcaccaagtac
atattcattgttaaggccataaaccaagctggaagtcgcaatagtgaacctggcaagcta
aaaaccaacagtcagccttttaaattagatcccaagtctgctcacaggaaacttaaggta
tcacacgacaacctgaccgtagagagggacgaaacatcttcaaaaaagagccacacacca
gagcgttttacaagccaaggaagttatggtgttgctggcaacgtgttccttgatagtggc
cggcattattgggaagtggttataagcggaagcacctggtatgctattggcattgcctac
aaatcagcacccaagcatgagtggataggaaagaacacagcctcttgggtgttttgccgt
tgtaacaacaactgggctgtaagacacaacagtaaagagattcctatagagccatctcca
catcttcgccgtgtagggatcttgctggactacgacaatggttcattgtctttttatgat
gctttgaactccattcacctctacacttttgacattgcttttgcacagcccgtgtgccca
actctcaccgtgtggaataagtgcttgacaattttaacaggcctccccattcctgatcac
ttggactgcctagagcagctagcataa
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