KEGG   Xenopus laevis (African clawed frog): 108709439
Entry
108709439         CDS       T01010                                 
Symbol
nfasc.S
Name
(RefSeq) neurofascin isoform X19
  KO
K06757  neurofascin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108709439 (nfasc.S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xla04515]
    108709439 (nfasc.S)
Cell adhesion molecules [BR:xla04515]
 Immunoglobulin superfamily
  L1 family
   108709439 (nfasc.S)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set C2-set_2 Ig_DSCAM-DSCAML_C Ig_5 V-set_CD47 Ig_6 BiPBP_C
Other DBs
NCBI-GeneID: 108709439
NCBI-ProteinID: XP_018104739
Xenbase: XB-GENE-6486375
UniProt: A0A8J0UMV6
LinkDB
Position
2S:56232676..56389700
AA seq 1079 aa
MTDIIERRLKVTHSIYCLGSNMPPCLVLLLLLLHVACTIKVPLDPTIQRDLIQPPTIIKQ
SAKNYIVDPRDNIFIDCEAQGNPYPIFSWTKNGKFYNVAKDPRVSFRRRSGTLEIDIHGG
GRPEDYEGEYQCFARNLHGTALSNKILLQVSRSPLWPKENLDPVVVNEGAFLILQCNPPH
GLPPPVIFWMSSLMEPIVQDKRVSQGLNGDLYFSNVLRQDAQTDYSCNARSHFTHTIQQK
NPYSLKVLTTRGMPERTPTFLLPTGTSSSKLVLRDEDLLLECIASGVPTPDIMWYKKGGE
LPSKKLKFENFNKTLRIIGVSEEDSGEYFCQASNKMGSIRHTISVRVKAAPYWLDEPKNL
ILAPGENGRLVCRASGSPKPTIQWFMNGDAIEVGATNPNFEIAGDTIIFREVQSGNSAVY
QCNASNEHGYLLANAFVSILDVPSRMLGPRYQVIRVIEYNRTQLDCPFFGSPIPTLRWFK
NGQGSNLDGGNYRVHENGTLEINTVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIVK
GPEDQIGKRGSSVRLDCRVRSDSSLRLTVTWMKEDTQLYISSRMKKDEDGLTIFGVAEKD
QGAYTCFAKTELDQDSSKAYLTIQETSSPTSRLTSHLIDKPDPPLDLELTEPSVRSVRLT
WVPGDDNNSPITGFIVQFEEDRHQPGAWHNLASVPGNVNTVLLQLSPYVNYQFRVLALNE
LGSSMPSPSSERFQTAGAFPETNPSDVKGAGTSKNNMEITWTPLNSTQAYGPNLRYNVKW
RQRHTGEPWSNVTVWGNKHVVWNTPVYTQYELRVQAENEFGKAPEPNTVIGYSGEDLPSA
PKYFRVYEPNREIIVVEWGQPEHRNGNLTAYNLRIQPFNGTRTGKAVLETLSPNQTKYTL
QRTDPVSRYRFSLNARTQVGAGEVITAESPVRQDEAYTKNQVDIATQGWFIGLMCAVALL
VLILLIVCFIKRSRGGKYPVREKKEVALGPDDNKDGDGSFDYSDEDNKPLQGSQTSLDGT
IKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq 3240 nt   +upstreamnt  +downstreamnt
atgacagatattatagaaaggaggttaaaggtgacccactctatctactgcctgggaagc
aacatgccaccgtgtttagtccttcttcttctccttctccacgtagcctgcactattaaa
gttcctttggacccaaccattcaacgagacctaatacaacccccaaccatcatcaagcag
tctgcaaaaaattatattgtagatccccgtgataacatcttcattgactgtgaagctcag
gggaatccttacccaatattttcatggacaaaaaatgggaaattttacaatgtggcaaaa
gatcctcgagtatcattccgtcgccgatctgggaccctcgaaatagatattcatggagga
ggaagacctgaagattatgagggggaataccaatgctttgcacgcaaccttcatggaaca
gctttatcaaacaagatcttacttcaagtctctcgatcccctttgtggcccaaagaaaac
ctggacccagtggtggtaaatgaaggtgccttcttgatccttcagtgcaatcctccccat
ggacttcctccaccagtcatattttggatgagcagcttgatggagcctattgtccaggac
aagagggtatcccagggattgaatggggacctttatttttccaacgttctgcgtcaggat
gctcagactgattatagctgcaatgcacgctcccattttactcacactattcagcagaag
aacccatattctctaaaagtgcttaccaccagagggatgcctgagagaaccccaactttc
ttgctgcctacgggtacttctagcagtaaactagtgctacgtgatgaggacttgctactg
gagtgtattgcttctggagtaccaacgccagacatcatgtggtataagaaaggaggagag
ctacccagcaagaaactgaaatttgaaaacttcaacaagactctacgcatcattggagtg
tctgaagaggactcgggggagtatttttgccaagcttcgaacaagatgggcagcattaga
cacacgatttctgtccgggtgaaggctgctccatattggcttgatgagccaaagaactta
attcttgcacccggtgagaatggacgtttggtatgtcgtgccagtggcagccccaaacct
acaatccagtggtttatgaatggagatgctattgaagtgggtgccacaaatcccaacttt
gaaattgcgggtgacaccatcattttccgagaagtacagagtggcaacagtgctgtatac
caatgcaatgcttctaatgaacatggttatctgttagctaatgccttcgtcagcattcta
gatgtcccatctcggatgctgggccctcgttatcaggtgattcgagtgatagaatacaac
aggacccagctagactgccctttttttggctctcctatacctactctccgctggtttaaa
aatggacagggtagtaaccttgatggtggcaactaccgtgtgcatgaaaatgggacccta
gagattaacactgtgaggaaggaggaccaaggaaaatacacatgcgttgctaccaatatt
ttgggcaatgctgaaaatactgtgcggctggaggtcaaagagccaactcgtattgtaaaa
ggccctgaagatcagattggtaagaggggttcttctgttcgcctggactgtcgagttcgc
agtgactcatctcttagactcactgttacctggatgaaagaggacactcagctgtatata
agcagcagaatgaagaaagatgaggatggacttacaatatttggtgtggcagaaaaggat
cagggagcatatacatgttttgctaaaacggaattggaccaggactcttctaaagcttat
ctcacaatacaggaaacttcctcacctactagccgactgacctcccatctcatagacaaa
ccagaccccccattggacctggagctaactgaaccatcagttaggagtgttcgcctcact
tgggttccaggagatgataacaacagtcccattacaggttttattgttcaatttgaggaa
gacaggcatcagccaggtgcatggcataaccttgcctctgtccctggcaatgtgaacact
gttctactacagctttctccttatgtcaactatcaatttcgagttcttgcactaaatgaa
cttgggagcagcatgccaagcccatcttcagaacgttttcagacagcaggagcatttcca
gaaacaaatccaagtgatgtgaagggagcaggaactagcaaaaataatatggaaatcaca
tggacaccactgaactctactcaggcgtatggtccaaacctgcgctacaacgtgaagtgg
cgccaacgtcacacaggagagccttggagtaatgtaacagtttggggcaacaagcatgtg
gtgtggaatacaccagtatacacccaatacgaactacgagtgcaggcggaaaacgaattc
gggaaggcgccagagccaaacactgtgattggatactctggagaagacttgccgagtgct
cctaaatactttcgagtctatgagccaaatcgggaaatcattgttgttgaatggggtcaa
ccagagcaccggaacggaaacttgactgcatacaacctccgcatccagccatttaatggg
accagaactgggaaggctgtgcttgaaacactttcacctaatcaaaccaaatataccctg
caaagaacagatcctgtgtcccgttatcgtttttctctcaatgcgagaacacaggttggt
gcaggggaagtcatcacagccgagtctcctgtcagacaggatgaagcttacacaaagaat
caagttgacattgctacacaaggctggtttattgggctcatgtgtgcagttgctctgctg
gtgctgattttgctgatcgtatgttttatcaaaaggagccgaggaggcaagtacccagtg
agagaaaaaaaggaggtagcattgggaccagatgataacaaagatggggatggctcattt
gactacagtgatgaggacaacaagcccctgcaaggtagtcaaacttcgctggatggaact
ataaagcaacaggagagtgatgacagccttgtggattatggagaagggggagaggggcag
tttaatgaggatgggtcatttatagggcagtatacagtgaaaaaggacaaagatgaaaca
gagggaaatgaaagttcagaggccacatctcctgtaaatgctatctattccctggcatag

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