Xenopus laevis (African clawed frog): 108709439
Help
Entry
108709439 CDS
T01010
Symbol
nfasc.S
Name
(RefSeq) neurofascin isoform X19
KO
K06757
neurofascin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108709439 (nfasc.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108709439 (nfasc.S)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
L1 family
108709439 (nfasc.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_6
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
108709439
NCBI-ProteinID:
XP_018104739
Xenbase:
XB-GENE-6486375
UniProt:
A0A8J0UMV6
LinkDB
All DBs
Position
2S:56232676..56389700
Genome browser
AA seq
1079 aa
AA seq
DB search
MTDIIERRLKVTHSIYCLGSNMPPCLVLLLLLLHVACTIKVPLDPTIQRDLIQPPTIIKQ
SAKNYIVDPRDNIFIDCEAQGNPYPIFSWTKNGKFYNVAKDPRVSFRRRSGTLEIDIHGG
GRPEDYEGEYQCFARNLHGTALSNKILLQVSRSPLWPKENLDPVVVNEGAFLILQCNPPH
GLPPPVIFWMSSLMEPIVQDKRVSQGLNGDLYFSNVLRQDAQTDYSCNARSHFTHTIQQK
NPYSLKVLTTRGMPERTPTFLLPTGTSSSKLVLRDEDLLLECIASGVPTPDIMWYKKGGE
LPSKKLKFENFNKTLRIIGVSEEDSGEYFCQASNKMGSIRHTISVRVKAAPYWLDEPKNL
ILAPGENGRLVCRASGSPKPTIQWFMNGDAIEVGATNPNFEIAGDTIIFREVQSGNSAVY
QCNASNEHGYLLANAFVSILDVPSRMLGPRYQVIRVIEYNRTQLDCPFFGSPIPTLRWFK
NGQGSNLDGGNYRVHENGTLEINTVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIVK
GPEDQIGKRGSSVRLDCRVRSDSSLRLTVTWMKEDTQLYISSRMKKDEDGLTIFGVAEKD
QGAYTCFAKTELDQDSSKAYLTIQETSSPTSRLTSHLIDKPDPPLDLELTEPSVRSVRLT
WVPGDDNNSPITGFIVQFEEDRHQPGAWHNLASVPGNVNTVLLQLSPYVNYQFRVLALNE
LGSSMPSPSSERFQTAGAFPETNPSDVKGAGTSKNNMEITWTPLNSTQAYGPNLRYNVKW
RQRHTGEPWSNVTVWGNKHVVWNTPVYTQYELRVQAENEFGKAPEPNTVIGYSGEDLPSA
PKYFRVYEPNREIIVVEWGQPEHRNGNLTAYNLRIQPFNGTRTGKAVLETLSPNQTKYTL
QRTDPVSRYRFSLNARTQVGAGEVITAESPVRQDEAYTKNQVDIATQGWFIGLMCAVALL
VLILLIVCFIKRSRGGKYPVREKKEVALGPDDNKDGDGSFDYSDEDNKPLQGSQTSLDGT
IKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgacagatattatagaaaggaggttaaaggtgacccactctatctactgcctgggaagc
aacatgccaccgtgtttagtccttcttcttctccttctccacgtagcctgcactattaaa
gttcctttggacccaaccattcaacgagacctaatacaacccccaaccatcatcaagcag
tctgcaaaaaattatattgtagatccccgtgataacatcttcattgactgtgaagctcag
gggaatccttacccaatattttcatggacaaaaaatgggaaattttacaatgtggcaaaa
gatcctcgagtatcattccgtcgccgatctgggaccctcgaaatagatattcatggagga
ggaagacctgaagattatgagggggaataccaatgctttgcacgcaaccttcatggaaca
gctttatcaaacaagatcttacttcaagtctctcgatcccctttgtggcccaaagaaaac
ctggacccagtggtggtaaatgaaggtgccttcttgatccttcagtgcaatcctccccat
ggacttcctccaccagtcatattttggatgagcagcttgatggagcctattgtccaggac
aagagggtatcccagggattgaatggggacctttatttttccaacgttctgcgtcaggat
gctcagactgattatagctgcaatgcacgctcccattttactcacactattcagcagaag
aacccatattctctaaaagtgcttaccaccagagggatgcctgagagaaccccaactttc
ttgctgcctacgggtacttctagcagtaaactagtgctacgtgatgaggacttgctactg
gagtgtattgcttctggagtaccaacgccagacatcatgtggtataagaaaggaggagag
ctacccagcaagaaactgaaatttgaaaacttcaacaagactctacgcatcattggagtg
tctgaagaggactcgggggagtatttttgccaagcttcgaacaagatgggcagcattaga
cacacgatttctgtccgggtgaaggctgctccatattggcttgatgagccaaagaactta
attcttgcacccggtgagaatggacgtttggtatgtcgtgccagtggcagccccaaacct
acaatccagtggtttatgaatggagatgctattgaagtgggtgccacaaatcccaacttt
gaaattgcgggtgacaccatcattttccgagaagtacagagtggcaacagtgctgtatac
caatgcaatgcttctaatgaacatggttatctgttagctaatgccttcgtcagcattcta
gatgtcccatctcggatgctgggccctcgttatcaggtgattcgagtgatagaatacaac
aggacccagctagactgccctttttttggctctcctatacctactctccgctggtttaaa
aatggacagggtagtaaccttgatggtggcaactaccgtgtgcatgaaaatgggacccta
gagattaacactgtgaggaaggaggaccaaggaaaatacacatgcgttgctaccaatatt
ttgggcaatgctgaaaatactgtgcggctggaggtcaaagagccaactcgtattgtaaaa
ggccctgaagatcagattggtaagaggggttcttctgttcgcctggactgtcgagttcgc
agtgactcatctcttagactcactgttacctggatgaaagaggacactcagctgtatata
agcagcagaatgaagaaagatgaggatggacttacaatatttggtgtggcagaaaaggat
cagggagcatatacatgttttgctaaaacggaattggaccaggactcttctaaagcttat
ctcacaatacaggaaacttcctcacctactagccgactgacctcccatctcatagacaaa
ccagaccccccattggacctggagctaactgaaccatcagttaggagtgttcgcctcact
tgggttccaggagatgataacaacagtcccattacaggttttattgttcaatttgaggaa
gacaggcatcagccaggtgcatggcataaccttgcctctgtccctggcaatgtgaacact
gttctactacagctttctccttatgtcaactatcaatttcgagttcttgcactaaatgaa
cttgggagcagcatgccaagcccatcttcagaacgttttcagacagcaggagcatttcca
gaaacaaatccaagtgatgtgaagggagcaggaactagcaaaaataatatggaaatcaca
tggacaccactgaactctactcaggcgtatggtccaaacctgcgctacaacgtgaagtgg
cgccaacgtcacacaggagagccttggagtaatgtaacagtttggggcaacaagcatgtg
gtgtggaatacaccagtatacacccaatacgaactacgagtgcaggcggaaaacgaattc
gggaaggcgccagagccaaacactgtgattggatactctggagaagacttgccgagtgct
cctaaatactttcgagtctatgagccaaatcgggaaatcattgttgttgaatggggtcaa
ccagagcaccggaacggaaacttgactgcatacaacctccgcatccagccatttaatggg
accagaactgggaaggctgtgcttgaaacactttcacctaatcaaaccaaatataccctg
caaagaacagatcctgtgtcccgttatcgtttttctctcaatgcgagaacacaggttggt
gcaggggaagtcatcacagccgagtctcctgtcagacaggatgaagcttacacaaagaat
caagttgacattgctacacaaggctggtttattgggctcatgtgtgcagttgctctgctg
gtgctgattttgctgatcgtatgttttatcaaaaggagccgaggaggcaagtacccagtg
agagaaaaaaaggaggtagcattgggaccagatgataacaaagatggggatggctcattt
gactacagtgatgaggacaacaagcccctgcaaggtagtcaaacttcgctggatggaact
ataaagcaacaggagagtgatgacagccttgtggattatggagaagggggagaggggcag
tttaatgaggatgggtcatttatagggcagtatacagtgaaaaaggacaaagatgaaaca
gagggaaatgaaagttcagaggccacatctcctgtaaatgctatctattccctggcatag
DBGET
integrated database retrieval system