Xenopus laevis (African clawed frog): 108709453
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Entry
108709453 CDS
T01010
Symbol
optc.S
Name
(RefSeq) opticin
KO
K08128
opticin
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
108709453 (optc.S)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
108709453 (optc.S)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
LRR_5
LRRNT
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
108709453
NCBI-ProteinID:
XP_018104794
Xenbase:
XB-GENE-17337154
UniProt:
A0A1L8H6T4
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All DBs
Position
2S:complement(59628597..59648741)
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AA seq
320 aa
AA seq
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MYLFIALCVSGIALCSAPPSPGASRNNKEKHRSGENIKLVDYNINYEESIDIRKYEELHD
YYDHEPKEVHTLTPLNKKSGLLTNQGTENPITLPSIPKPSEHSLFGSMTEQGLPICLVCA
CIGTSVYCDDVDLNGIPPLPKDTAYLYARFNRITRINNNDFKGLNKLKRVDLSSNFLSKI
DDDAIHFLPSLQELILSENQLKALPELPSSLTRLDVQYNQLQSSGIQTDAFKDLTSLEYL
YLSNNKLDYIPVPLPYSLRSLHLQNNNIQTMNLETFCESRDLTFIRRNLEDIRMDDNPIN
LSKFVHGYFCLVRLPTGSYY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctttattgctttgtgtgtctctggtattgccctctgttcagctcctccatcc
cctggggctagcagaaataacaaggaaaagcacagaagtggagaaaacataaagctggtt
gactacaatattaattatgaggaatctattgatataagaaaatatgaggaacttcatgat
tattatgaccatgaacccaaggaagttcatacactgactccactgaataaaaagtctggc
ctactgacaaaccaggggactgagaatcccatcacactacccagtattccaaaaccatca
gaacatagtctgtttggatccatgactgagcaaggcctccctatctgcctggtttgtgct
tgcattggaacttcagtctactgtgatgatgtggacctgaacggtattccccctctaccc
aaagacactgcttacttgtatgcacgttttaacagaatcactagaataaacaacaatgac
tttaaagggctaaacaaactgaaacgtgtggatctctccagtaattttctgtctaagatt
gatgatgatgccattcatttcctgccatcccttcaagagcttatcctttctgagaaccaa
cttaaggctctgcctgagttaccctcaagccttactcgcttagatgtccagtataatcag
ttgcaaagttctgggatccagacagatgcatttaaggatcttaccagtttggagtacttg
tatctttcaaacaacaaactggactatattcctgtgccactcccttacagtctacggtcc
cttcacctgcagaataacaacattcaaacaatgaaccttgaaaccttctgtgaaagcaga
gacctcacgtttataagacggaacttggaggacattcgaatggatgataatccaatcaat
ctcagcaaatttgtacatggctatttctgtcttgtccgacttcctactggttcctactac
tga
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integrated database retrieval system
