Xenopus laevis (African clawed frog): 108709495
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Entry
108709495 CDS
T01010
Symbol
vti1b.S
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108709495 (vti1b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108709495 (vti1b.S)
Membrane trafficking [BR:
xla04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108709495 (vti1b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
GAT
ATG17_like
WXG100
Fusion_gly
DUF5345
Tam41_Mmp37
Motif
Other DBs
NCBI-GeneID:
108709495
NCBI-ProteinID:
XP_018104888
Xenbase:
XB-GENE-6488529
UniProt:
A0A1L8H759
A0A974HVI7
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All DBs
Position
2S:complement(64397989..64411354)
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AA seq
221 aa
AA seq
DB search
MSSEQYEKLHELYNELYANLQKIQQRLQSSYGEEKKKLLREFGEKQKEANEMLSEMENEL
KSAPPSFRHQTTSKLRAYKRDLVKLQMEANYNALELGPKERETYNVKNEHSTHLASQRSL
LLQGTESLNRATDSIARSHRIAAETDAIGTDIIEELGEQREKLDRTKGRLVGTSENLSKS
RKILRSMSRKIVTNKLLLSIIIILELAILGGLIYYKFFSKR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgaacaatatgagaaactccatgagctctacaatgagctatatgccaacctt
caaaaaatacagcagagactgcagagcagctatggagaggaaaagaaaaagctgcttaga
gaattcggtgaaaagcagaaggaagcaaatgaaatgctgagtgagatggaaaatgaatta
aaatctgctccaccaagttttcgtcatcaaacaacgagcaaattgagagcctacaagaga
gatctggttaaacttcagatggaagcaaattataatgcacttgaacttggccctaaagaa
agagaaacctacaatgtgaaaaatgagcatagtacacacttggcatcccaaaggtcactg
cttcttcaaggcactgaaagcttaaacagagcaacagacagcattgctagatcgcatcgt
atagcagctgaaactgatgccattggcaccgatattatagaggagctaggagagcaaaga
gaaaagttggataggaccaaaggacggttggtgggcacaagtgagaatcttagtaaaagc
cgaaaaatcctgcggtccatgtcgcggaaaattgtgacaaacaagcttctgctgtcgatc
ataattattcttgaacttgcaatccttggtggcttaatctactacaaattcttcagcaaa
cgctga
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integrated database retrieval system
