Xenopus laevis (African clawed frog): 108709565
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Entry
108709565 CDS
T01010
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108709565
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108709565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108709565
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
108709565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
Itf52_C
Motif
Other DBs
NCBI-GeneID:
108709565
NCBI-ProteinID:
XP_018105016
UniProt:
A0A974DHW3
A0A1L8H7N6
LinkDB
All DBs
Position
2S:74725434..74735454
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AA seq
610 aa
AA seq
DB search
MSRSVMPRVYIGRLSHRARERDVERFFKGFGKIVEVDLKNGYGFVEFEDSRDAEDAVYEM
NGRELCGERVIVEQARAPRRDIRSGYGYRKGGNDKYGPPVRTMYRLRVENLSSRCSWQDL
KDFMRQAGEVTYAEAHQRRQNEGIIEFRSYSEMRRALDKLDGSEINGRKIQLVEDRAGSR
TKGSSSRSRSRSRSRRSRSSHSRSRSHSRSYSRSRQRERSRSQSKQRRSKRSHSKERRGS
RSVSKGRTGSRSVSKGRSRSVSKGRSRSVSKGRSRSVSKGRRGSRSVSKGRRGSRSQSKG
RASRSQSKGRASRSQSKGRASRSQSKGRTSRSQSKGRASRSQSKDRASRSQSKDRANGRD
RSADEKESVRSKSRSRSKGRRETDSQSKEKKEIVSRSTERSRSHSKESRQSRSHSRDAKE
RNESTEGQELNSRKGDRSESKDRSHSRERINSKERSRSKDRDYIRSKDKHSRKCSRDQKR
SRSRDRSRERRSKRSRERSRRSERNRPSSRSKERTRKRSRERRSSSGERSKKIRREDTVA
FTTESDQEAENEEGSKAEVVQHPETIGVTQQIEETPKPLSKSASHVETSVEAGANAITEA
CEEVGRLDCD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgatctgtgatgcccagggtttacatcgggcgcctcagccacagagcccgggag
cgagacgtggagaggttctttaaaggcttcggcaagattgttgaagtggatttaaaaaac
gggtatggttttgtagagtttgaagacagccgtgatgcagaggatgcagtctatgaaatg
aatggaagggaactatgtggtgagagagtcattgtggagcaggcacgtgccccaaggagg
gacatccgaagcgggtatggttaccgcaaaggtggcaatgacaagtatggccctccagtc
cgtacaatgtaccggctgagagtggagaacctatcttcaaggtgcagttggcaagatcta
aaggattttatgcgccaggctggggaggttacctatgcagaagcccaccaacgtcgtcaa
aatgaaggcattatagagttccgctcctactctgaaatgaggcgagcattagacaagctg
gatggtagtgaaattaatgggcgcaagatacagttagtggaagacagagctggctccagg
actaaaggctcttcatctcgtagtcgctccagatcccgctcaaggaggagtagaagcagc
cactccaggtccagatcccactctcgatcctatagtaggagccgccaacgggagaggagc
agaagtcaaagcaaacaaaggagaagcaaaaggagccacagcaaagagaggagagggagt
aggagtgtcagcaagggaaggacagggagtaggagtgtcagcaagggaaggagtaggagt
gtcagcaagggaaggagtaggagtgtcagcaagggaaggagtaggagtgtcagcaagggg
aggagagggagtaggagtgtcagcaaggggagaaggggtagcagaagccagagcaaggga
agagcaagtagaagccagagcaagggaagagcaagtagaagccagagcaagggaagagca
agtagaagccagagcaagggaagaacaagtagaagccagagcaagggaagagcaagtaga
agccagagcaaggacagagcaagtagaagccagagcaaggacagagcaaatggaagggat
aggagtgcagatgaaaaggagagtgtaaggagcaagagccgcagtagaagcaagggaaga
agggaaacagacagccagagcaaggaaaagaaagagattgtaagcaggagcacagagcga
agcagaagccatagcaaagagagcaggcaaagcagaagccatagtagagatgcaaaggaa
agaaatgaaagcacagaggggcaagagctgaatagccgaaagggagatagaagtgaaagt
aaagacaggagccatagcagagaaagaataaacagtaaggaaagaagcagaagcaaggat
agagactacatcagaagcaaagataaacactctcgaaaatgcagcagggatcaaaaaagg
agccgcagtagggatagatctagagagagacggtcaaaacgtagcagggagagaagccgc
aggagtgaacgaaataggccttccagccgtagcaaagagagaactagaaagcgaagtcgt
gaacgaaggagcagcagtggtgagcgctcaaaaaaaatcaggcgagaagacacagtggct
ttcactacagaatctgaccaggaggcagaaaatgaggaaggaagcaaggctgaagttgta
caacatcctgaaacaattggggtcactcaacaaattgaggagactcccaaacctctttcc
aaatcagcatctcatgtggagactagtgttgaagctggagccaatgcaatcactgaagca
tgtgaagaagttggaaggctggactgtgactag
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