Xenopus laevis (African clawed frog): 108709608
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Entry
108709608 CDS
T01010
Symbol
med13.S
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108709608 (med13.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
108709608 (med13.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
108709608
NCBI-ProteinID:
XP_018105100
Xenbase:
XB-GENE-17337872
UniProt:
A0A8J0UCQ4
LinkDB
All DBs
Position
2S:83672072..83735365
Genome browser
AA seq
2165 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYIWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDERPGRRELWIFWWGDDPNFADLIHHDLADEEDGIWDNGLSYECRTLLF
KAIHNLLERCLMNRNFVRIGKWFVKPYEKDEKPVNKSEHLSCSFAFFLHGDSNVCTSVEI
NQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKMSDSSTKKLIGEWKQFY
PISSNVKESSEEKHEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQSDLPPTSSVGSSH
CSNTCLGVQVPASSRDPAMSSVTLTPPTSPEEVQTGSIDAQSAQKWVKFPAVSDCFNSDT
TSHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSSNGVCEDESPEKTTSWDFVESTQR
TTCVCSRHKNVKQRNLNQPGQPVTASMQQATQKHKTNDKQEKGDKPQKRPLTPFHHRASL
SDDFNIEADSASQRLGIRSQDTRGRFSNIRPNDVAKTPQMHNNEMTSSPPPPPLSPHPCE
VLDEGGETIKNPSTPHSQHFYQMPTPDPLIPVKAIDERIDSLPQTFASAFPEILEPTMYV
GTAVRLEAGENDNTWKYYKVPKKKEAEFNPPQLPNDKLREDTSGKENIISVTELMVQGKK
PLKISEELLHKYQSKNQYIPTAVLNTDQDSDPYTFVDDDVEFIFSDSKKERQITDRDVGK
KHKAEDVMSNVSVLPQEGEDAMSLFSPSVKPDAQRSEAHARTASTSLFHETDLVVSYTDL
DNLFNSDEDELTPGSKRALNADEKANGKELKPGNLDPLSCISTADLHKMYPTPPSLEQHF
MGFSPMNMNSKDYGNMDTTPGGSLLDGSNFCIGAQFKIEVDEGFCSPKPSEIKDFSYVYK
PETCQVLVGCSMFAPLRTLPSQCVPAIKLPDECIYRPSWTVGKLELIPPVPHMPFIKDGN
IPSVGSAMDQDYVQTYTPQTHTPFGMSSSAPPSNSGAGILPSPATPRFSAPTPRTPRTPR
TPRGGGGPASVQGSVKYDNSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSE
SVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEVQYRCTCGFSAVMNRKFGNNSG
LFLEDELDIIGRQTDSGKEVEKRFEALRAAGGDHGVLRDPEKMPDELILLLHDQCTNLFS
PFGTLDQEPITKTGTVSYSARVEEQDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSTCL
HRWSKRNAIDASMQCSQDILRMLLSLQPVLQDAVQKKRTVRSWGVQGPLTWQQFHKMAGR
GSYGTDESPEPLPIPTFLVGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVVCPDNE
ALLNGAKSFFRDLTAMYESCRLGQHRAISKQLTDGIMKVGSTAAKKLSEKPVAEWFSQAA
NSNSEAYSKLRLYAQVCRYELGPYLASQPLDSSLLCQPNLASPASQAVSVQPASSCTPGN
PSTPSSLNSSAAASSSTVTPNNLPQAAATGSSSTANVAGGMSGNKPTSFPPYGNISSTTN
SIPAQVNSVQNNQGGQQTQQTLQQNTGMSSEQSAAAAAAAAEVTESTMERDKVGVPTDGE
SHAITYPPAIVVYIVDPFTYENKDEDSNASSVWMLGLLRCFLEMSHILPPHLRNTVSVQI
VPCQYFLQPVRQEDRQIYTQHLKSLAFSVFTQCRRPFPASTNVKTLTGFGPGLAIENVLK
SPERPDCIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWLLASCTD
LYGELLETCIINIDVPNRARRKKGSARRCGLQKLWEWCQGLVQMSSLPWRVVIGRLGRIG
HGELKDWSRLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDS
VSTGSVFGRSTTLTMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENIDLAFNTNN
DGADGMGIFDLLDTGDDLDPDIINNLPTSPTGSQGHSPGSHYPHGGDAGKGQGTDRLLST
ESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVPSVQS
DELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQLYNF
IMNML
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgctttgtgccgaacggggccagtctggaggattgccactccaacctcttc
tgtctggctgatcttaccgggatcaaatggaagcggtacatatggcaaggcccaacttcc
gctccaatcctctttccagtaacagaagaggaccctattttaagcagtttcagtcgatgc
ttgaaagccgatgtgctgagcgtttggcgacgtgatgagcgtccgggacgaagggagctg
tggatattttggtggggagatgatccaaattttgctgatttaatccaccatgatcttgct
gatgaggaagatggcatttgggacaatgggctttcctatgagtgtcgcaccttgctcttt
aaggctatacacaaccttctggaaagatgcctcatgaaccgtaactttgtgcgcatcggg
aaatggtttgttaagccttatgaaaaggatgaaaaaccggtcaataaaagtgaacaccta
tcctgctcttttgccttttttcttcatggagacagcaatgtttgcacaagtgtggaaatt
aatcagcaccaaccagtatatcttctcagtgaggagcatctcacattagcccagcagtcg
aacagcccatttcaagttatacttagcccatttggattgaatggcaccttgacaggacaa
tctttcaagatgtctgattcatccaccaagaaactgattggagaatggaaacagttttat
cccatttcatctaatgtaaaagagtcctcagaggagaagcatgaagaaatggattgggaa
gatgactcgttggctgctgttgaagtattagttgctggggtcagaatggtctatccagcc
tgctttgtcctagttcctcagtcagatctccctcctaccagctctgttggatcttctcac
tgttcaaacacctgcttaggtgtgcaagtgcctgcttcttccagagatccagctatgtcc
tctgtaacactcactcctccaacatccccagaagaagtgcaaacaggtagcattgatgcc
cagtcagcacaaaaatgggtaaagtttcctgctgtgtcagactgctttaactctgataca
actagccatcatggtggcaagattccaagaaaactggctaatcaggtggtcgatagagtg
tggcaagaatgcaatatgaacagagcacagaacaagaggaagtattcttctaatggtgtt
tgtgaggatgagtctcctgaaaaaacaacatcctgggattttgttgagtccacacagaga
acaacttgtgtctgctcaaggcacaaaaatgtaaagcagagaaatttaaatcaaccaggg
cagccagtgactgctagtatgcaacaagcaacccagaagcacaagacaaatgataagcag
gaaaagggtgacaaaccccagaagcgtcccctaacaccttttcatcaccgtgcatctctc
agcgatgattttaatattgaggcagatagtgccagccagagactcgggattcgatcccag
gacactagaggaaggttctcaaatattcgacccaatgatgtagcaaaaactcctcaaatg
cataataatgagatgactagctctccacctccacctcccctaagtcctcacccttgtgaa
gttttggatgaaggaggagaaaccattaaaaatccatcaactcctcatagtcagcatttt
tatcaaatgccaacgccagacccattaattccagtaaaggctattgatgaacggatagat
agtttaccgcaaacctttgcttcagcattccctgagattttagagccaactatgtatgtg
ggcactgctgtccgcctagaggccggtgaaaatgacaacacgtggaagtattataaagtc
ccaaaaaagaaagaagcagagtttaatcccccacagcttccaaatgataaacttagggaa
gatacttccggaaaggaaaatatcatatctgtcacagagttaatggtgcaaggtaaaaaa
ccgttaaagatctcagaggaattacttcacaagtatcaaagcaaaaatcaatacatacca
acagctgtattaaacactgatcaagactctgatccatatacgtttgtagatgatgatgtg
gaatttatattttctgactcaaagaaggaaagacaaatcacagatagggatgttggaaaa
aaacacaaggcagaagatgtaatgtctaatgtttcagtgttaccacaagaaggtgaagat
gcaatgtcactttttagtccatctgtcaaaccagacgcacagcgatctgaagctcatgca
cgcactgcatcaacaagtctctttcatgaaacagaccttgtggtatcttacactgacctg
gataatctctttaattcagatgaggatgagctaactcctggatccaagagggcccttaat
gctgatgaaaaagcaaacggcaaagagttgaaacctggaaatttagatcccctgtcttgc
ataagtacagcagatcttcataaaatgtatccaacaccaccttctctggaacagcatttt
atggggttttctcctatgaacatgaacagcaaagattatggcaatatggacactacacca
ggaggatcactgttagatggaagcaatttctgtataggtgctcaatttaaaatagaagtt
gatgaaggtttctgcagcccaaagccctctgaaataaaggacttctcctatgtatacaaa
cctgaaacgtgtcaggtgctagtaggatgctccatgtttgctcctttaagaactctcccc
agtcagtgtgtgccagcgattaaattaccagatgagtgcatttatcgcccaagttggaca
gttggaaaacttgagttgatccctccggtaccccatatgcccttcatcaaagatggcaat
attcccagtgttggaagtgctatggatcaagactatgttcagacatacacccctcaaacc
cacacaccttttgggatgtcaagcagtgctccacccagtaacagtggagcaggaatcctt
ccttctcctgcaacccctcgtttttctgctcctactccgcgaactccaagaacacctcgt
acaccacggggaggtggtggtccagctagtgtccaagggtcagtgaagtatgacaattct
gacctgtattctcctgcttcaacaccatcaacatgcaggcctctcaactccgttgagcca
gcaaccgttccatcaatccctgaagctcatagcctctatgtgaacctcattctttctgag
tctgtgatgaacctctttaaagattgcaattttgacagttgctgcatctgtgtatgcaat
atgaacattaaaggagctgatgttggagtctacattccagaccccacacaagaggtgcag
tacagatgcacttgtggctttagtgcagtgatgaaccgaaagtttggcaacaattctggc
ttgtttttagaagatgagttggatattattggcagacaaacagacagtggtaaagaagta
gaaaaacgatttgaagctctcagagctgctggaggagatcatggtgttttaagagacccg
gagaaaatgcctgatgagttaatattactcctccatgatcagtgcactaatttgttctct
ccatttggcacattggatcaagagcctatcacaaaaaccggcacagtaagttactcggct
cgtgttgaagagcaggactgttgtaatgattgttaccttgcattggagcatggccgtcag
ttcatggataatatgtctggaggcaaagtagatgaagcacttgtgaaaagtacttgctta
catcgctggtctaaaagaaatgctatagatgccagtatgcagtgttcccaggatatcctt
cgcatgcttctttcattacaacctgtgttgcaagatgcagttcagaaaaaaagaactgtt
cgttcttggggtgtgcagggacccttaacgtggcaacagtttcacaaaatggccggtcga
ggctcttatggaacagatgaatcaccagagccactgccaatccctacctttcttgtgggc
tatgattatgattttttggtgctgtcaccatttgcactgccttattgggaaagactgatg
ttggaaccctatgggtcacaaagggacatcgcttatgttgttgtatgcccagataatgag
gctttgctgaatggagccaaaagtttctttagggatctcactgcaatgtatgagtcttgt
aggcttggtcagcatagagctatctccaaacagttaacagatggcatcatgaaggttggg
tctacggctgctaaaaagctgtccgaaaagccagttgccgaatggttttctcaagcagca
aatagcaacagtgaagcatattctaaactccggttgtatgcacaagtttgccgatatgaa
ctaggtccatatcttgcatcccagccactagacagttccctgttatgccagccaaacctc
gcttcccctgcaagtcaggcggtttcagtccagccagcatcatcatgtacacctggaaat
ccaagcactccatcctctttaaactcttctgcagcagccagctcctctactgtaacacct
aataatctgcctcaagcagctgccacagggtcttcatctactgccaacgtggctggtggc
atgagcggaaacaagccaacatcatttcctccttatgggaatataagtagtaccactaat
tccattccagcacaagttaattctgttcagaacaatcaaggagggcagcaaacacagcaa
acattgcaacaaaacactggaatgtcaagtgaacagtctgcagctgcagcagctgctgca
gcagaggtcactgaaagtacaatggagcgggataaagttggtgtccctactgatggagaa
tcccatgcaatcacttatccaccagccatagtggtttatattgttgatccttttacgtat
gaaaataaagatgaggactcaaacgcatctagtgtgtggatgcttggacttctacgctgt
tttttggaaatgtcgcatatcctcccaccccaccttagaaatacagtttctgtgcagatt
gttccatgccagtatttcttgcagcctgtccgacaagaggatcgtcaaatatatacacag
cacttaaaatcattagcgttttcagtgtttacccagtgccgaagaccatttccagcttca
acaaatgtgaagacattaactggatttgggcctggtttagctattgaaaatgtgttaaag
agccctgaaagacctgactgtatccgtctttacacaccaccatttattctggctcctgtg
aaagataaacagactgagcttggtgaaacatttggagaggctggtcaaaaatataatgtt
ttgtttgttgggtactgcttatcacatgatcagcgatggcttttggcttcttgtacagac
ctttatggggagctcttagagacctgcatcattaacattgatgtgccaaacagagcacga
cggaaaaaaggttctgctcgccgttgtggtcttcagaagttatgggaatggtgtcaaggg
cttgtacaaatgagttcacttccatggagagttgtgatagggcgcttaggaaggataggc
catggagagttaaaggactggagccgtttgttgagccgccgcaatcttcagtcactcagc
aagaggttaaaagatatgtgtcgcatgtgtggtatatctgcagcagattctcccagcatt
ctaagtgcttgtttagtcgcaatggagccacaaggttcatttgtgatcatgcctgattct
gtatcaacgggttcagtatttggccgtagtacaaccctgaccatgcaaacttctcagtta
aacacaccacaagatacatcatgcactcacattttagttttccctacatcagcatctgtt
caggtagcttctgctacttacaccactgagaacatagatctggctttcaatacaaacaat
gatggtgcagatggaatgggaatttttgatttattagacactggtgatgatttggatcct
gatatcattaacaatcttcctacatctccaactggatcccaagggcattcacctggatcc
cattatccacacggaggtgatgctggaaagggtcaaggtacagaccggctgctgtccaca
gaatctcatgatgaagtgaccaatattctgcaacaacctttggcacttggttactttgta
tcaactgctaaagctggtcctttgcctgactggttttggtcggcatgtcctcaagcacaa
aatcagtgcccactgtttcttaaggcctctttgcacctccatgtgccttcagtgcaatcc
gatgagctgctccatagcaaacactcccacccactggactccaatcagacgtcagatgtg
ctcaggtttgttttggaacagtacaacgccctctcctggctaacctgtgatcccgcaact
caagacagacgctcgtgtttgccggttcactttgtggtgctgaaccagttgtataatttt
atcatgaacatgctgtga
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