Xenopus laevis (African clawed frog): 108709695
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Entry
108709695 CDS
T01010
Symbol
tmtops2.S
Name
(RefSeq) parapinopsin
KO
K04256
c-opsin
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108709695 (tmtops2.S)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xla04030
]
108709695 (tmtops2.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108709695 (tmtops2.S)
G protein-coupled receptors [BR:
xla04030
]
Rhodopsin family
Vision
Opsin
108709695 (tmtops2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF2975
Motif
Other DBs
NCBI-GeneID:
108709695
NCBI-ProteinID:
XP_018105242
Xenbase:
XB-GENE-17337435
UniProt:
A0A1L8H8M4
A0A974DIH1
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Position
2S:complement(101235765..101313438)
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AA seq
393 aa
AA seq
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MEHSWIESSVMMSTIKNWTTNMSYIENDMSLPPEAVLSRTGHTVVAIFLGFILVFGFLNN
FVVLILFCKFKTLRTPVNMMLLNISASDMLVCVSGTTLSFTSSIKGRWIGGEYGCQWYGF
VNSCFGIVSLISLAILSYERYSTLTLYNKSGPDFKKALLAVGSSWLYSLVWTVPPLLGWS
SYGREGAGTSCSVRWTSESVESVSYIICLFIFCLALPVFVMLYCYGRLLYAVKQVGKIRK
IAARKREYHVLFMVITTVICYLICWLPYGVVALLATFGRPGVVSPVASVIPSILAKSSTV
FNPIIYILMNKQFYKCFLTLFHCHPTSSADGKSICQSNYTVIQMNQKLNNTVAIPGQTQI
PDSRSMDKMPCIHRQVNEPSYQIPQSTTDQLIS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaacattcatggattgaatcatctgtcatgatgtctaccataaaaaattggacaacc
aatatgtcttacatagaaaatgatatgtcactaccacctgaagcagtgctttctaggact
ggacacacagtcgtggcaatattccttggatttatacttgtatttggttttctcaataac
tttgtggtgcttatactcttctgcaagttcaaaaccctgagaacgccagttaatatgatg
cttttgaatatcagtgctagtgacatgctggtctgtgtgtctggtacaactctcagtttt
acatccagtattaaaggcagatggattggtggagaatatggctgccagtggtatggcttt
gttaactcctgctttggaattgtatcactcatctcactggctatcctgtcttatgagcgt
tacagcacgctaaccttgtacaacaaaagtggtcctgattttaaaaaagcactgcttgct
gtgggaagttcctggttatattccttagtgtggacagtgccgccccttcttggatggagc
agttatggaagggaaggagctggaacaagctgttcggtgcgctggacatctgaatctgtg
gagtcagtctcttacatcatttgtcttttcattttctgcctggcattgcctgtgtttgtg
atgctctactgctatggaagacttctgtatgctgtaaagcaggtgggaaagatcagaaag
attgctgcccgtaaaagagaataccatgtcttattcatggtgattacaacagtgatctgc
tacttgatttgctggttgccctatggagtggttgctttgcttgctacattcggaaggcca
ggggtggtatctcctgttgccagcgtcatcccatccattctggccaagagcagtactgtt
ttcaatcccattatttatattcttatgaataagcagttctacaaatgctttctcacactt
ttccactgtcaccctacatcatcagcggatgggaaatctatatgtcagtcgaattataca
gtcatccagatgaaccaaaaacttaacaatacagtggcaatccctggacagactcagata
cctgatagcagaagtatggacaagatgccttgcattcatagacaagtcaatgagccatct
tatcaaattccacaatctacaacagatcaattaatttcatga
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