Xenopus laevis (African clawed frog): 108709728
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Entry
108709728 CDS
T01010
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04810
Regulation of actin cytoskeleton
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108709728
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108709728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108709728
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108709728
Factors involved in mRNA localization
Other mRNA localization factors
108709728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
108709728
NCBI-ProteinID:
XP_018105300
UniProt:
A0A974HW28
A0A1L8H8S7
LinkDB
All DBs
Position
2S:complement(105550721..105604899)
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AA seq
1253 aa
AA seq
DB search
MTTQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSILFQPNFNTNFEDRNAFVTGIARYI
EQATVHSGMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVDVLEPEVT
KLMNFMYFQRNATERFCAEVKRLCHAERRKDFVSEAYLMTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGYEELLAD
IVNLCVDYYENKMYLTPGEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLNKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFELSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAELQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWGSGCEPFNDPALRGEKDPK
TGFDIKVPRRTVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAHYKVVAGG
LLLDKRLRADCKNQGANISQPTSNRYDTLLKQRHVQLLGRSIDLNRLITQRISAALYRSL
ELAIGRFESEDLTSIVELDGLIEINRMTHKLLSKFLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTYRFVRTVMPFSQEFQRDKQPNAQPQYLFGSKLLNLAYSS
IFSYYRHFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTVLQYVKTLMEVMPTIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQSLREVGNTLLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLEAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVQTFLDDAIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLNWAGCLIIALLRQHRQFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIFGILDKYLKSGEGENTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccaagtgacattggaggatgctttgtccaatgtggatctgttggaggagctg
cctttaccagaccagcagccctgcattgagcctcctccttcttcaatactgttccagcct
aattttaatactaactttgaagaccgaaatgcatttgttacagggattgctagatatatt
gaacaagctactgtacattctggcatgaatgaaatgcttgaagaagggcaggagtatgct
atcatgctatatacatggagaagctgttcaagagctataccacaggttaaatgcaatgag
cagcctaaccgtgtggaaatctatgaaaaaactgtggatgtattggagcctgaggttact
aagctgatgaacttcatgtactttcagagaaatgccacagaacggttctgtgcagaggta
aaacgcctgtgtcatgctgagcgacggaaggactttgtatctgaagcttacctgatgaca
cttggcaaatttatcaatatgtttgctgtcttggatgagcttaaaaacatgaagtgtagt
gttaaaaatgaccactctgcatacaagagagcagctcagtttctacgaaaaatggctgac
ccacaatcaatccaggaatctcagaacctgtctatgtttctggccaatcacaataagatc
actcagtctttgcagcaacagctagaagttattcccggctatgaagagctccttgctgac
atagttaatctgtgtgttgactactatgaaaataaaatgtatctgactcctggggagaaa
cacatgcttctaaaagtaatgggctttgggctgtatcttatggatggcagcgtgagcaac
atttacaaactggacgccaaaaagagaattaacttgaataaaatagacaagttctttaag
caactacaagtggtccctttgtttggtgacatgcaaattgaacttgcaagatatattaaa
acaagtgcacattatgaagaaaataaatccagatggacctgtacctcatcgagcagcagt
ccacaatataatatatgtgagcagatgattcagattagagaagaccacatgcgctttatt
tctgagttggctcgctatagcaatagtgaggtggtgactggatcaggacgccaagaagcc
cagaagaccgatgcagagtaccgaaaactctttgaattgtctttgcaagggcttcagctg
ttgtctcagtggagtgcacatgtaatggaagtgtactcctggaagcttgttcatccaacc
gataaatactccaataaagactgcccagacaatgcagaagaatatgaacgtgctacaaga
tacaactataccagtgaggagaaatttgctttggttgaggtcattgccatgattaaaggt
ctacaagtcctcatgggcagaatggaaagtgtatttaatcatgctattcgccatactatc
tatgcagagctgcaggattttgcccaggtcacactaagagagccactgagacaagctatt
aagaagaagaaaaacgtaatccaaagtgtgctccaggctatcagaaagactgtttgtgac
tggggatctgggtgtgaaccattcaatgaccctgctttaaggggtgaaaaagacccaaag
actggatttgatattaaagttcctcgacgtactgttggaccatcgagcacccagctttat
atggtgagaaccatgctagaatccctcattgctgacaaaagtggttccaagaaaactctg
agaagtagcctagaggggcccaccattttggacatagaaaaatttcaccgagaatctttc
ttctacacacatttgcttaatttcagtgaaaccttacagcagtgctgtgacttgtcccag
ctatggttcagggagtttttcttggagttaacaatgggccgcagaatccagtttcctatt
gagatgtcaatgccgtggattctgacagaccatatcctggagaccaaggaggcatctatg
atggagtatgtcctatactctctggatctctataatgacagcgcacattatgcacttaca
aagttcaaaaagcagtttctttatgatgaaattgaagctgaggtaaacttgtgcttcgac
cagtttgtctacaagttagcggaccaaatatttgcccactacaaagttgtagctggcggc
cttcttctagacaagcggcttagagcagactgtaagaatcagggagcaaatatttcccag
ccgacatccaatcgctatgacactttgctgaagcagaggcatgtacagcttctagggcga
tcaattgacctgaatcgcttaattacgcagagaatttcggctgctctctacagatcactg
gagctggccattgggcgatttgaaagtgaagatctgacctcaatagttgagctggacggt
ctaattgaaataaatcgaatgacgcacaagctgttgagcaagttcttgaccttggacagt
tttgatgctatgttccgtgaggccaatcataatgtgtctgctccttacggcagaatcacc
ctccacgtcttctgggagcttaactatgactttcttccaaattactgctacaatggatcc
acttacaggtttgttcgtacggtgatgcctttttctcaagagttccagcgggacaagcag
ccaaatgctcaacctcagtacttatttggttccaagcttttaaatttggcatacagcagc
atttttagctactacaggcactttgtgggccccccacacttcaaagtgatctgccgactt
ctggggtatcaagggattgcagtagtcatggaggagctactgaaggttgtcaagagtctg
ctacaaggtacagttcttcagtatgtgaaaaccttaatggaagttatgcccacgatctgc
cgccttccaagacatgagtatggctctccaggtatactggaatttttccatcaccagctg
aaagacatagtggaatatgcagaactaaaaactgtgtgtttccagagcctgagggaagtg
ggcaatactctcctcttctgcctcctcatcgaacagagcttatccctggaggaagtctgt
gacctgcttcatgcagctccctttcagaatatactcccaagggtgcatgtaaaggaaggt
gaacgcttggaagcaaagatgaagagactggaatccaagtatgcacctctgcacctagtt
ccactcatagagagactgggaactccccagcaaattgctatagcaagggaaggggatctt
ttgaccaaggagcgcctttgttgtggcctttccatgtttgaagttatcctgaccagagta
cagacattcttggatgatgctatatggcgcggccctctccccagcaacggtgtgatgcac
gtggatgagtgtgtggagtttcatcggctttggagtgccatgcagtttgtctactgtatc
ccagtgggaacgcatgagttcactgtagagcagtgctttggtgatggactgaactgggcc
gggtgcttgatcattgcacttctgagacagcaccgtcagtttgatgtcctagatttctgc
tatcaccttctcaaggtccagaaacatgatggcaaagatgaagttatcaagaatgtgccc
ttgaaaaaaatggttgagcggatccgcaagttccagatactaaatgatgaaatctttggc
atcttagacaagtacttgaagtcaggagaaggagagaatacccctgtagagcatgttcga
tgcttccagccacccattcaccagtctctggccagcaactaa
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