Xenopus laevis (African clawed frog): 108709733
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Entry
108709733 CDS
T01010
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108709733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108709733
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108709733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Dicers_N
DUF4446
TssO
Motif
Other DBs
NCBI-GeneID:
108709733
NCBI-ProteinID:
XP_018105313
UniProt:
A0A8J0UP24
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All DBs
Position
2S:105816757..105868663
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AA seq
1125 aa
AA seq
DB search
MFSQKARKIRRQSENHSVKSSGRRSRDSRITNGEKAEAVTLFEVVCIGKGAIQSVVSDWV
EVYQEDRDAALLDLLNFYIQCSGCQGVVTAEMFQNQGNQDIVQRLTEEFDKETGLQFKKF
MAFPWILTITWPNNMENGDYPLSKSGIYWKKFRANICELTAVLVQKCQYNAIYDGYLLDT
VISLLLGLSDSCIRAFRHTSTLSAVKLHTALVRIILNLETSIHNLQRLYNVKQTRLTLKK
ASHRMEQIEKKRNELQQKHSEIKNMLDALFKGTIVQRYRDVVSDIRALCIEELGIWMKMY
PQVYLNDSCLKYIGWMLYDKVPDVRLKSLLSLQGLYENKDFVVKMDLFSTRFKDRIISMT
LDRDHDVSVQAMKLLVFMSQNCEDLLTKEDCDLLYQCVYTAYRPLATAAGEFLYKRHLNQ
AEGEESRGTRCNAQQLKFLLTFFCENKLHEHLTYLVDSLWDCNPRLLKDWQCMSSLLLQD
TQDGEDALNAIQQSLLIELLLASVRQAVEVHPPVGRGTVRKMLSAKEKKVQLEDHIKITE
HFAQTLPLLLAKYLKDQRKVANLLQILQYFKFEVYSTKCLDKDLEALLNELKHVALTHSD
PEVLEACSKAYIGLGEEDLESHVSVSLARRQLIKQLVDTFSQMLHDLLQEGEEPLSSQGA
HQMSCVLRKLAAFQNAHDPTEWNLYEKTSQLLLYDVENCCFSVQLLVPAFQCMYYALLWN
VVAVMEETISKEEPVLFREHVATFWQLCKHYLNHQDRSVQEQAFMSLCDVLLLLSHYRNG
IYCCMDSALQSELFSFVHHHVFQSDEEKHKGVGGSEKDKAVISEGLHKRQNLLAAYCKLI
ANNIVEMAAASEIYKQYIKAYNDFGDIIKETLSRTRQNDKIESTKTLILCLEQLFQKHRE
VHGSATLSSPSFFNIKEMARRFSLTFGMDHVKCRESVVMIHKQGIEFAFREPALEDNFPP
PNLAFLIPISEFSGKLLKPDKRLVYGYLQRIANEQMLLREGVEWNPLVFYTHSLLDNLDE
ESSFTSSYYSRDFKTTSSPTKRKPFSGRRGMPEALKMYYPVQRRKRHLMHGDKLDDGISL
YSLQPSVKRLSSHGDADEGNEDVEVDEVLVTKEIILHTESQDSTG
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgttctcacagaaggctaggaagatccgaagacagtcagaaaaccactctgtgaaaagt
tctggaagaagaagcagggacagcagaatcaccaatggagaaaaagccgaggctgtaaca
ctttttgaagttgtttgcattggaaagggggcaattcagtctgtggtgagtgactgggtt
gaagtctatcaagaagacagggatgcagcattgctcgaccttctaaacttttatattcag
tgctcaggatgtcaaggggtggttactgcagaaatgtttcagaatcaagggaaccaggac
atagtgcagaggcttacagaggagtttgataaagaaacaggtttacagttcaagaaattt
atggcttttccttggattctcactattacatggccaaataacatggaaaatggagactat
ccactgtccaaatcaggaatctactggaaaaaattcagggcaaatatctgcgaactcaca
gctgtgcttgtgcagaagtgtcaatacaatgctatttatgatggatatcttctggacaca
gttatctcactgttgcttggtttatcagactcgtgcatcagggcattcagacatacaagc
actttatcggccgtgaagctgcacactgccctggtgaggattattctcaaccttgaaacc
agtatacacaatttacaaagactgtacaatgtgaaacaaacgcggctcacattgaaaaag
gccagccacagaatggagcaaattgagaaaaaaaggaatgagctacagcagaaacacagt
gaaattaaaaatatgttagatgctttatttaaagggaccattgtgcaacgttacagagat
gtggtctctgatataagagcactgtgtattgaagaattggggatatggatgaaaatgtac
cctcaagtctatttgaatgatagctgcttgaaatacattggatggatgctgtatgataag
gtacctgatgttcgcttgaaaagtctactttctcttcaagggctttatgagaacaaggat
tttgttgtcaaaatggatctattcagtaccaggtttaaggatcgtattatatcaatgact
ctagacagagaccatgatgtgtctgtacaagcaatgaaacttcttgtgtttatgtcacag
aattgtgaagatctgttaacaaaagaggactgtgatcttctgtaccagtgtgtatacaca
gcttacagacccctggctacagcagctggggaattcctatataaaaggcatctaaatcaa
gcagaaggagaggaaagcagaggaactagatgcaatgcccaacagttaaagtttcttcta
actttcttctgtgaaaataagctgcacgagcatctgacataccttgtagacagcctctgg
gactgcaatcctaggcttctgaaagactggcaatgcatgtcatcacttttgcttcaagac
actcaagatggggaagatgctttgaatgccattcaacaaagcctactgattgaacttctc
ttggcaagtgtgcgacaagcagttgaagtgcatcctcctgtgggaagaggaacagtacgg
aagatgctctctgccaaggagaagaaagtgcaactggaagatcatataaagattactgag
cactttgcacaaaccctccccttgcttctagctaagtatttaaaagaccaaagaaaggtg
gcaaaccttttacagatactgcagtattttaaatttgaggtttattccactaagtgtttg
gataaggacttggaggctttgctaaatgagctgaaacatgtagcattgacccactcagac
cctgaggtgctagaagcctgttctaaagcctacatcggtctgggtgaagaggacctagaa
agccacgtcagtgtcagccttgctaggagacagctgataaagcaacttgtggacacgttc
agccagatgctgcatgatctgttacaggagggagaagagcctctgagttcacaaggtgca
caccagatgtcctgcgttttacgaaagctggcagcttttcagaatgcccatgaccccacg
gaatggaatctgtatgagaaaacatcacagctattgctgtatgatgtagaaaactgctgt
ttttctgttcagctgctagtgccggctttccagtgcatgtattatgcccttctctggaat
gtggtggctgtaatggaagagacaatttccaaggaggagcctgttctttttagggaacat
gtggcaactttttggcagctctgcaaacattatctaaatcaccaagatagatctgtgcag
gagcaggcattcatgtcattgtgtgacgtacttctcttgctaagtcactacagaaatgga
atatactgctgtatggattctgcactgcagtcagagctgttttcatttgtccaccatcat
gtctttcaaagcgatgaagaaaaacacaaaggtgtaggtggatcagaaaaagacaaagca
gtgatctcggaaggtttgcacaagaggcagaatctactggctgcgtactgcaaacttata
gctaacaatattgtggaaatggctgcagcttcagagatttacaagcagtatataaaggcc
tataatgactttggagacataattaaggaaaccttaagtcgaacaaggcagaatgacaaa
atagagagcacaaaaactctgatcctttgtttggaacagctgttccagaagcacagagaa
gtacatggcagtgccactctgtcctccccttcattctttaacataaaggagatggcccgg
cgcttttctctaaccttcggcatggaccatgtgaaatgcagagaatctgttgttatgata
cacaaacaaggaattgagtttgctttccgtgagccagcattagaagataatttcccacca
ccaaatcttgcattcttgatccctattagtgaattttctggaaaacttctgaaacctgac
aagagacttgtgtatggctatctacagaggattgctaatgagcaaatgctactacgtgaa
ggagtagaatggaacccactggttttctatacccattctctgttagataatctagatgag
gagagctctttcacaagcagctactattctagagactttaaaacaacatccagccctacc
aagaggaaaccattttctggacggagaggcatgccagaagcactgaagatgtattatcct
gtgcagaggaggaaaagacacttgatgcatggagacaagttagatgatggtatatcattg
tacagccttcagccttctgtgaaacgattatctagtcatggagatgctgatgaaggaaat
gaagatgttgaagtagatgaggttttagtgaccaaggagattattctgcatacggagagt
caagattccactggatag
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