Xenopus laevis (African clawed frog): 108709739 Help Entry 108709739         CDS       T01010                                  Name (RefSeq) collagen alpha-1(IV) chain-like   KO K06237   collagen type IV alpha Organism xla  Xenopus laevis (African clawed frog) Pathway xla04510   Focal adhesion xla04512   ECM-receptor interaction xla04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xla00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108709739  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108709739   09142 Cell motility    04820 Cytoskeleton in muscle cells     108709739  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:xla04147]     108709739    00536 Glycosaminoglycan binding proteins [BR:xla00536]     108709739 Exosome [BR:xla04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108709739 Glycosaminoglycan binding proteins [BR:xla00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108709739 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108709739 NCBI-ProteinID:  XP_041440189 UniProt:  A0A8J1MEQ1 LinkDB All DBs Position 2S:107992315..108103121 Genome browser AA seq 1669 aa AA seqDB search MRRRLLFSLLVLLELIGTSDSAACNGCGTSKCDCSGAKGQKGERGLPGLSGLMGFPGLQG PEGPQGPIGQKGDTGEPGLPGTKGTRGPPGSHGFPGNPGLPGIPGQDGSPGPPGIPGCNG TKGERGPVGPHGLPGIIGYPGSPGQPGPKGEPGDITGIDVSMVKGEKGFPGINGLPGTPG LPGTPGVVGPIGPPGPAGPPGSPGTPGQKGEMGISFYGPKGEKGDRGPVGAPCKSTTEPQ GREKDDQIYYGEKGENGMPGEKGERGQSGQSFKGEKGEPGPAGPRGKPGKDGDQGEKGVQ GVPGIPGFSGPPGLDGAEGDKGEIGPQGPPGIVITDDDTAVCEKGDRGLPGFPGQKGERG LKGAQGVPGLQGSPGLPVAGSTGLPGFPGERGEKGEHGLPGLALQGPKGKDGLPGPPGLP GLPGEIDTSLECVTGQPGEPGLPGNPGQNGFQGERGQKGDKGDACPSCDLVPPGLPGPPG PQGPPGDQGAPGVLGIKGDRGQPGYDGLPGVPGPQGSPGLMGSPGAKGEPGEVYFEPRLK GDKGDVGIPGQPGTPGREGRPGSDGQQGLPGPKGVSGTIGAKGEEGLPGDKGSPGNPGER GFPGPAGIGPSGPPGEKGEPGVPGFVGIPGVPGAKGEPGKAIIKTGLPGPMGSAGVPGLP GDQGEKGSSGPPGRPGPQGEKGEVGLHGVGYPGPPGEKGFQGMPGTPGQAGFPGPQGLDG LPGSKGEQGKKGEPGLGLPGLKGFQGPPGPAGIPGEKGNHGSPGVPGEQGFSGVPGHPGS KGEPGIVGVPGIQGPPGVPGIGSKGQQGLLGPQGSPGYPGPAGVKGERGYAGFPGLDMPG PKGDKGNAGLPGPTGVPGIPGQPGGPGKEGLPGFPGPKGEMGVMGTPGNIGPPGAPGSPG PLGEKGDPGPVGPPGTDGYPGTKGEKGELGLRGEPGKISETDKDTMKGSKGDQGERGEIG ILGEKGTTGESGSPGMPGKDGLKGVPGESGPKGEKGTQGIQGTPGFPGQKGAIGGMGLPG PTGEKGQHGLTGSPGSPGLEGIKGEKGVKGEVGLPGIGIPGVPGVKGEAGRDGPHGLPGE RGEKGDVGIPGMPGFPGSKGATGQVGIPGNPGLPGEKGAKGTSGLGGTPGLKGQSGDPGV QGPPGHSGEKGEPGYDGIPGSPGEKGETGIPGRGLPGFPGEQGEKGSKGDIGLPGAPGIP GVPGIKGDQGLPGIQGPQGTPGFRGLPGVPMEGPKGDRGQPGQVGFQGSPGPVGLPGLPG EDGMKGEKGERGWPGAPGFQGFKGDLGMQGPPGDAGDPGITGQKGDTGPSGLPGLPGVKG SIGISGEKGDSGDRGIPGPKGDSGPPGPAGTHMVTKGEPGGPGPQGPSGPRGIQGLPGPK GEKGLSGVSGLPGPSGTPGIYGTPGQKGETGPSGPAGPRGYPGPPGSDGLPGPIGLPGLP SMAHGFLVTRHSQTSEIPPCPFGTTAVYSGYSLLYVQGNERAHGQDLGASGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDSIKSFISRCTVCEVPATVMAF HSQTIQIPQCPDGWISLWIGYSFVMQTSAGAEGSGQALASPGSCLEEFRSVPFIECHGRG TCNYYANTYSFWLATIEGNEMFKKPTPSTLKAGDLRTNVSRCQVCMRRS NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgagacggaggcttctgttttcgctgctcgtattgctagagctcatcggcaccagtgat tctgcggcctgcaatggatgtggaactagcaaatgtgactgcagtggagcaaaaggacaa aaaggtgagcgaggtctgcctggtttatctggattaatgggctttcctggactccaaggg ccagaagggccacagggaccaataggtcagaagggtgacacaggagaaccaggtcttccc ggcacaaaaggaaccagaggtccacctggttctcatggatttccaggaaatccaggtctt cctggcatacctgggcaggatggctcaccaggcccacctgggattccagggtgtaatggc acaaagggtgaaagaggacctgtcggaccacatgggcttcctggaataattgggtatcct ggatcacctgggcaaccaggaccaaaaggagaacctggagatattactggaattgatgta tcaatggtaaaaggagaaaagggttttcctggaattaacggattaccgggtacacctgga ttgccaggtacaccaggcgttgttggaccaattgggccaccaggccctgcaggacctcca ggttcacctggtactccaggacaaaagggtgaaatgggaataagtttttatggaccaaaa ggggaaaagggtgatcggggacctgtaggtgctccttgcaagtctacaactgaacctcaa ggcagggaaaaagatgatcaaatatattatggagaaaagggagaaaatggaatgcctggt gaaaagggtgaacgtggacaatcaggacaaagctttaagggtgaaaaaggagagcccggg ccagcagggccccgaggaaaacctgggaaagatggtgaccaaggtgaaaagggagttcaa ggagttccaggtattccaggattttcaggtcctccaggattggatggagcagaaggagac aagggtgaaattggaccacaggggcctccaggaattgtaattacagatgacgatacagca gtatgtgaaaaaggagatcgtggactacctggttttcctggacaaaaaggagaaaggggt cttaaaggtgctcagggagtgccaggcttacaaggatctccagggcttcctgttgctgga tctactgggctaccaggttttcctggtgagagaggtgaaaagggagaacatggattgcca gggttagctcttcaagggccaaaaggcaaagatgggttgcctggtcctcctggattacct ggtttaccaggtgaaatagatacaagcctagaatgtgtaactgggcagccgggagagcct ggattacctggaaatcctggacaaaatggattccaaggggagagagggcagaaaggtgat aaaggtgacgcatgtccttcatgcgatttagttccaccaggacttcctggaccaccaggt cctcaaggacctcctggagatcaaggtgctcctggtgtactaggaatcaaaggagataga ggtcaaccaggctatgatgggttaccaggagtgccgggacctcaaggtagtccaggttta atgggaagccctggtgcaaaaggagaacctggggaggtatactttgagccaaggctaaaa ggggataaaggagatgtaggaatacctggacagcctggaacacctggaagagagggaaga ccgggcagtgatggacaacaaggactgcctggtccaaaaggtgtatcgggaacaataggt gcaaaaggtgaagaaggacttcctggtgacaaaggatctcctggaaaccctggggaacgt ggctttccaggaccagctggcatagggccttctggaccaccaggtgaaaaaggagaacct ggcgttcctggatttgtaggcatacctggtgtacctggtgctaaaggtgaacctggaaag gctattattaaaactgggctaccaggaccaatgggaagtgcaggagttccaggccttcca ggagatcaaggtgaaaaaggatcttcaggacctcctggaagaccaggaccccagggggag aaaggcgaagttggcttacatggtgtaggatatcctgggcctcctggtgaaaaaggtttt caaggaatgccaggtacacctggtcaagctggttttcccggtccacagggacttgatgga ttacctggttcaaaaggggaacaaggaaaaaaaggtgaaccaggtttggggcttccaggc ctaaaaggattccaaggaccacctggacctgctggaattcctggagagaaaggaaatcat ggatcacctggtgtgccaggggaacagggattttcaggtgttccaggccatccggggagc aaaggtgagcctggtattgtgggcgttccaggaattcaaggacctccaggtgtacctgga attggatctaaggggcaacaaggacttttgggaccacaaggttctccaggttatccagga cctgcaggagttaaaggagaacgtggctatgctggtttcccaggattagatatgccagga ccaaagggagacaaaggaaatgcaggattaccaggacctacaggtgtaccaggaattccc ggccagccaggtggaccagggaaagagggccttccaggttttccaggaccaaagggagaa atgggtgtcatgggaacaccaggaaacattggaccaccaggagccccaggcagtccggga ccattaggtgaaaaaggtgaccctggtcctgttgggcctcctggcacagatggatatcct gggacaaaaggagaaaaaggtgaattaggattgcgtggtgaacctggtaaaatatcagaa actgacaaggatactatgaagggtagcaagggagatcaaggagaaagaggtgagattggc atcttgggagaaaaaggaactactggagaatctggcagcccaggaatgcctggaaaagat ggactgaaaggagtaccaggagagtcaggacctaaaggagaaaagggtacacaaggaata caaggaaccccaggatttccaggacaaaagggggctataggagggatgggtttgccaggg cctactggagaaaaaggtcaacatggactaacaggatcaccaggaagccctggtttggaa ggaataaagggagaaaaaggagtaaagggtgaagtgggtcttccaggtatcggcattcca ggggtgcctggcgttaagggtgaagctggaagagatggccctcatgggttaccaggggaa aggggtgaaaaaggtgatgttggtattccaggaatgccaggatttccaggttccaaagga gctacaggccaagtaggcataccaggtaacccaggacttccaggagaaaagggtgccaaa gggacctctgggttggggggcactccaggcctaaaaggacaatcaggtgatccaggtgtt caaggtcctcctggccattctggagagaaaggtgaacctggttatgatggaattccaggc tcacctggtgaaaagggagagacaggcatacctggtaggggactaccaggatttccagga gaacagggagaaaaaggttccaaaggtgacattggtttacccggtgcacctggaattcct ggtgtcccaggtataaaaggtgatcaaggattacctggtattcagggccctcaagggaca ccggggtttcgtggacttccaggagtaccaatggaaggacccaaaggtgacagaggacag ccaggtcaagtaggatttcaaggttctccaggccctgtaggacttcccggccttcctgga gaggatggtatgaaaggtgaaaaaggagaaagaggatggcctggagcacctggttttcaa gggtttaaaggggaccttggaatgcaaggaccaccaggagatgcaggtgatccaggtata actggtcaaaagggcgatacaggaccttcaggacttccaggacttccaggtgtgaaaggt tctataggtatatctggtgaaaagggtgattctggtgacagagggataccaggacctaaa ggtgattcgggtcctcctggacctgctggtacacacatggtcactaaaggagaacccgga ggtccaggaccacaaggtccttctggtcctagaggaattcagggattgcctggtccaaaa ggggaaaaaggtttgtctggtgtttctgggctgcctggaccaagtggtacaccgggaata tatggcaccccaggtcaaaaaggagagactggtccaagtggtccagcaggtccaagagga taccctggccccccaggcagtgatggcttgcctggacctataggcttgcctggactacct tctatggctcatggttttcttgttacgaggcacagtcagacaagtgaaattccaccatgt ccttttggaacaactgctgtttatagtggatattcactgctctatgtgcaaggcaacgaa agagcacatggtcaggacttgggggcttctgggagttgtcttcgtaaatttagcacaatg cctttcctcttctgcaatataaataatgtctgcaactttgcttcaaggaatgactattcc tattggctttccactccagaaccaatgccaatgagcatggctccaatcacaggggacagt attaaatctttcatcagcaggtgcactgtgtgtgaggttcctgccacggtaatggctttt catagtcaaacaattcagatacctcagtgccctgatggatggatttcactatggattggg tattcttttgtaatgcaaacgagtgctggtgctgaaggctcagggcaagctctggcatcc ccaggatcctgtctagaagagttcaggagtgtaccatttattgagtgccatgggcgtgga acctgtaactactatgccaatacctacagcttttggcttgcaacaatagaggggaatgag atgtttaaaaaaccaactccttcaacgctaaaggctggagatctacgcacaaacgtcagc cgctgccaagtttgcatgagaaggtcataa

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