Xenopus laevis (African clawed frog): 108709739 Help Entry 108709739         CDS       T01010                                  Name (RefSeq) collagen alpha-1(IV) chain-like   KO K06237   collagen type IV alpha Organism xla  Xenopus laevis (African clawed frog) Pathway xla04382   Cornified envelope formation xla04510   Focal adhesion xla04512   ECM-receptor interaction xla04518   Integrin signaling xla04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xla00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108709739    04518 Integrin signaling     108709739  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108709739   09142 Cell motility    04820 Cytoskeleton in muscle cells     108709739  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     108709739  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:xla04147]     108709739    00536 Glycosaminoglycan binding proteins [BR:xla00536]     108709739 Exosome [BR:xla04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108709739 Glycosaminoglycan binding proteins [BR:xla00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108709739 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108709739 NCBI-ProteinID:  XP_041440189 UniProt:  A0A8J1MEQ1 LinkDB All DBs Position 2S:107992315..108103121 Genome browser AA seq 1669 aa AA seqDB search MRRRLLFSLLVLLELIGTSDSAACNGCGTSKCDCSGAKGQKGERGLPGLSGLMGFPGLQG PEGPQGPIGQKGDTGEPGLPGTKGTRGPPGSHGFPGNPGLPGIPGQDGSPGPPGIPGCNG TKGERGPVGPHGLPGIIGYPGSPGQPGPKGEPGDITGIDVSMVKGEKGFPGINGLPGTPG LPGTPGVVGPIGPPGPAGPPGSPGTPGQKGEMGISFYGPKGEKGDRGPVGAPCKSTTEPQ GREKDDQIYYGEKGENGMPGEKGERGQSGQSFKGEKGEPGPAGPRGKPGKDGDQGEKGVQ GVPGIPGFSGPPGLDGAEGDKGEIGPQGPPGIVITDDDTAVCEKGDRGLPGFPGQKGERG LKGAQGVPGLQGSPGLPVAGSTGLPGFPGERGEKGEHGLPGLALQGPKGKDGLPGPPGLP GLPGEIDTSLECVTGQPGEPGLPGNPGQNGFQGERGQKGDKGDACPSCDLVPPGLPGPPG PQGPPGDQGAPGVLGIKGDRGQPGYDGLPGVPGPQGSPGLMGSPGAKGEPGEVYFEPRLK GDKGDVGIPGQPGTPGREGRPGSDGQQGLPGPKGVSGTIGAKGEEGLPGDKGSPGNPGER GFPGPAGIGPSGPPGEKGEPGVPGFVGIPGVPGAKGEPGKAIIKTGLPGPMGSAGVPGLP GDQGEKGSSGPPGRPGPQGEKGEVGLHGVGYPGPPGEKGFQGMPGTPGQAGFPGPQGLDG LPGSKGEQGKKGEPGLGLPGLKGFQGPPGPAGIPGEKGNHGSPGVPGEQGFSGVPGHPGS KGEPGIVGVPGIQGPPGVPGIGSKGQQGLLGPQGSPGYPGPAGVKGERGYAGFPGLDMPG PKGDKGNAGLPGPTGVPGIPGQPGGPGKEGLPGFPGPKGEMGVMGTPGNIGPPGAPGSPG PLGEKGDPGPVGPPGTDGYPGTKGEKGELGLRGEPGKISETDKDTMKGSKGDQGERGEIG ILGEKGTTGESGSPGMPGKDGLKGVPGESGPKGEKGTQGIQGTPGFPGQKGAIGGMGLPG PTGEKGQHGLTGSPGSPGLEGIKGEKGVKGEVGLPGIGIPGVPGVKGEAGRDGPHGLPGE RGEKGDVGIPGMPGFPGSKGATGQVGIPGNPGLPGEKGAKGTSGLGGTPGLKGQSGDPGV QGPPGHSGEKGEPGYDGIPGSPGEKGETGIPGRGLPGFPGEQGEKGSKGDIGLPGAPGIP GVPGIKGDQGLPGIQGPQGTPGFRGLPGVPMEGPKGDRGQPGQVGFQGSPGPVGLPGLPG EDGMKGEKGERGWPGAPGFQGFKGDLGMQGPPGDAGDPGITGQKGDTGPSGLPGLPGVKG SIGISGEKGDSGDRGIPGPKGDSGPPGPAGTHMVTKGEPGGPGPQGPSGPRGIQGLPGPK GEKGLSGVSGLPGPSGTPGIYGTPGQKGETGPSGPAGPRGYPGPPGSDGLPGPIGLPGLP SMAHGFLVTRHSQTSEIPPCPFGTTAVYSGYSLLYVQGNERAHGQDLGASGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDSIKSFISRCTVCEVPATVMAF HSQTIQIPQCPDGWISLWIGYSFVMQTSAGAEGSGQALASPGSCLEEFRSVPFIECHGRG TCNYYANTYSFWLATIEGNEMFKKPTPSTLKAGDLRTNVSRCQVCMRRS NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgagacggaggcttctgttttcgctgctcgtattgctagagctcatcggcaccagtgat tctgcggcctgcaatggatgtggaactagcaaatgtgactgcagtggagcaaaaggacaa aaaggtgagcgaggtctgcctggtttatctggattaatgggctttcctggactccaaggg ccagaagggccacagggaccaataggtcagaagggtgacacaggagaaccaggtcttccc ggcacaaaaggaaccagaggtccacctggttctcatggatttccaggaaatccaggtctt cctggcatacctgggcaggatggctcaccaggcccacctgggattccagggtgtaatggc acaaagggtgaaagaggacctgtcggaccacatgggcttcctggaataattgggtatcct ggatcacctgggcaaccaggaccaaaaggagaacctggagatattactggaattgatgta tcaatggtaaaaggagaaaagggttttcctggaattaacggattaccgggtacacctgga ttgccaggtacaccaggcgttgttggaccaattgggccaccaggccctgcaggacctcca ggttcacctggtactccaggacaaaagggtgaaatgggaataagtttttatggaccaaaa ggggaaaagggtgatcggggacctgtaggtgctccttgcaagtctacaactgaacctcaa ggcagggaaaaagatgatcaaatatattatggagaaaagggagaaaatggaatgcctggt gaaaagggtgaacgtggacaatcaggacaaagctttaagggtgaaaaaggagagcccggg ccagcagggccccgaggaaaacctgggaaagatggtgaccaaggtgaaaagggagttcaa ggagttccaggtattccaggattttcaggtcctccaggattggatggagcagaaggagac aagggtgaaattggaccacaggggcctccaggaattgtaattacagatgacgatacagca gtatgtgaaaaaggagatcgtggactacctggttttcctggacaaaaaggagaaaggggt cttaaaggtgctcagggagtgccaggcttacaaggatctccagggcttcctgttgctgga tctactgggctaccaggttttcctggtgagagaggtgaaaagggagaacatggattgcca gggttagctcttcaagggccaaaaggcaaagatgggttgcctggtcctcctggattacct ggtttaccaggtgaaatagatacaagcctagaatgtgtaactgggcagccgggagagcct ggattacctggaaatcctggacaaaatggattccaaggggagagagggcagaaaggtgat aaaggtgacgcatgtccttcatgcgatttagttccaccaggacttcctggaccaccaggt cctcaaggacctcctggagatcaaggtgctcctggtgtactaggaatcaaaggagataga ggtcaaccaggctatgatgggttaccaggagtgccgggacctcaaggtagtccaggttta atgggaagccctggtgcaaaaggagaacctggggaggtatactttgagccaaggctaaaa ggggataaaggagatgtaggaatacctggacagcctggaacacctggaagagagggaaga ccgggcagtgatggacaacaaggactgcctggtccaaaaggtgtatcgggaacaataggt gcaaaaggtgaagaaggacttcctggtgacaaaggatctcctggaaaccctggggaacgt ggctttccaggaccagctggcatagggccttctggaccaccaggtgaaaaaggagaacct ggcgttcctggatttgtaggcatacctggtgtacctggtgctaaaggtgaacctggaaag gctattattaaaactgggctaccaggaccaatgggaagtgcaggagttccaggccttcca ggagatcaaggtgaaaaaggatcttcaggacctcctggaagaccaggaccccagggggag aaaggcgaagttggcttacatggtgtaggatatcctgggcctcctggtgaaaaaggtttt caaggaatgccaggtacacctggtcaagctggttttcccggtccacagggacttgatgga ttacctggttcaaaaggggaacaaggaaaaaaaggtgaaccaggtttggggcttccaggc ctaaaaggattccaaggaccacctggacctgctggaattcctggagagaaaggaaatcat ggatcacctggtgtgccaggggaacagggattttcaggtgttccaggccatccggggagc aaaggtgagcctggtattgtgggcgttccaggaattcaaggacctccaggtgtacctgga attggatctaaggggcaacaaggacttttgggaccacaaggttctccaggttatccagga cctgcaggagttaaaggagaacgtggctatgctggtttcccaggattagatatgccagga ccaaagggagacaaaggaaatgcaggattaccaggacctacaggtgtaccaggaattccc ggccagccaggtggaccagggaaagagggccttccaggttttccaggaccaaagggagaa atgggtgtcatgggaacaccaggaaacattggaccaccaggagccccaggcagtccggga ccattaggtgaaaaaggtgaccctggtcctgttgggcctcctggcacagatggatatcct gggacaaaaggagaaaaaggtgaattaggattgcgtggtgaacctggtaaaatatcagaa actgacaaggatactatgaagggtagcaagggagatcaaggagaaagaggtgagattggc atcttgggagaaaaaggaactactggagaatctggcagcccaggaatgcctggaaaagat ggactgaaaggagtaccaggagagtcaggacctaaaggagaaaagggtacacaaggaata caaggaaccccaggatttccaggacaaaagggggctataggagggatgggtttgccaggg cctactggagaaaaaggtcaacatggactaacaggatcaccaggaagccctggtttggaa ggaataaagggagaaaaaggagtaaagggtgaagtgggtcttccaggtatcggcattcca ggggtgcctggcgttaagggtgaagctggaagagatggccctcatgggttaccaggggaa aggggtgaaaaaggtgatgttggtattccaggaatgccaggatttccaggttccaaagga gctacaggccaagtaggcataccaggtaacccaggacttccaggagaaaagggtgccaaa gggacctctgggttggggggcactccaggcctaaaaggacaatcaggtgatccaggtgtt caaggtcctcctggccattctggagagaaaggtgaacctggttatgatggaattccaggc tcacctggtgaaaagggagagacaggcatacctggtaggggactaccaggatttccagga gaacagggagaaaaaggttccaaaggtgacattggtttacccggtgcacctggaattcct ggtgtcccaggtataaaaggtgatcaaggattacctggtattcagggccctcaagggaca ccggggtttcgtggacttccaggagtaccaatggaaggacccaaaggtgacagaggacag ccaggtcaagtaggatttcaaggttctccaggccctgtaggacttcccggccttcctgga gaggatggtatgaaaggtgaaaaaggagaaagaggatggcctggagcacctggttttcaa gggtttaaaggggaccttggaatgcaaggaccaccaggagatgcaggtgatccaggtata actggtcaaaagggcgatacaggaccttcaggacttccaggacttccaggtgtgaaaggt tctataggtatatctggtgaaaagggtgattctggtgacagagggataccaggacctaaa ggtgattcgggtcctcctggacctgctggtacacacatggtcactaaaggagaacccgga ggtccaggaccacaaggtccttctggtcctagaggaattcagggattgcctggtccaaaa ggggaaaaaggtttgtctggtgtttctgggctgcctggaccaagtggtacaccgggaata tatggcaccccaggtcaaaaaggagagactggtccaagtggtccagcaggtccaagagga taccctggccccccaggcagtgatggcttgcctggacctataggcttgcctggactacct tctatggctcatggttttcttgttacgaggcacagtcagacaagtgaaattccaccatgt ccttttggaacaactgctgtttatagtggatattcactgctctatgtgcaaggcaacgaa agagcacatggtcaggacttgggggcttctgggagttgtcttcgtaaatttagcacaatg cctttcctcttctgcaatataaataatgtctgcaactttgcttcaaggaatgactattcc tattggctttccactccagaaccaatgccaatgagcatggctccaatcacaggggacagt attaaatctttcatcagcaggtgcactgtgtgtgaggttcctgccacggtaatggctttt catagtcaaacaattcagatacctcagtgccctgatggatggatttcactatggattggg tattcttttgtaatgcaaacgagtgctggtgctgaaggctcagggcaagctctggcatcc ccaggatcctgtctagaagagttcaggagtgtaccatttattgagtgccatgggcgtgga acctgtaactactatgccaatacctacagcttttggcttgcaacaatagaggggaatgag atgtttaaaaaaccaactccttcaacgctaaaggctggagatctacgcacaaacgtcagc cgctgccaagtttgcatgagaaggtcataa

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