Xenopus laevis (African clawed frog): 108709775
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Entry
108709775 CDS
T01010
Symbol
tbc1d4.S
Name
(RefSeq) TBC1 domain family member 4 isoform X2
KO
K17902
TBC1 domain family member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108709775 (tbc1d4.S)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108709775 (tbc1d4.S)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108709775 (tbc1d4.S)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108709775 (tbc1d4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
108709775
NCBI-ProteinID:
XP_018105401
Xenbase:
XB-GENE-17345587
UniProt:
A0A1L8H9D0
A0A974HWP0
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All DBs
Position
2S:117688483..117771482
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AA seq
1223 aa
AA seq
DB search
MERKSSAALCHPLLEANTVPAMAPKEEKGFGLWYIGWSSLDRRTTLPMLPWLVAEIRRRA
EKQDPPGCAAPCREVNLMLVTPHLRCVPALNGANTNSAVFIFEHKAQHISRFIHNSRDPS
YFAYLIKTQPDNPESETACHVFKASSPRQVSDIISSIRQISKVTLKEDSKPCRDSEDAFY
NSQKYEVLYCGKVVIANKKAPSTLVDDCIEKFSQHERQRLKSLTEQQSSESSTDFSLAEI
DVPGSPSDMFLEQDSENNIIPSSGHHSGIFTVGSQSNLLGSRVTFPERILEDSGFEDQQE
FRTRCSSVTIQKRVQDKIQPRRRHASAPSHVQPSDSEKNRTMLFQVGRFEINLISPDTKT
VELEKNFKDISSCSQGIKHIDHFGLVCRECVEPGINQYICYVFQCASEALVEEVMLTLKQ
AFSTAAALQSAKTQIKLCEACPMHALHKLCERIEGLYPPRAKLVIQKQLSLLTDNEQADI
FERVQKMKATGDQEENELVILHLRQLCETKQKTHVHIGDVQPNLPCNTIPENTAQSGRFK
LDILKNKAKKSLTSSLENIFSRGTNKMRGRLGSMDSFERCNSFTSDKDGSPGDSPPATPP
SSPVSSSFPPFPEEDPDSPKLRRRAHTFSHPTSSGKRRITFPDSKSPSARFPLQRQNSLA
NDVGQSSECEGRRRTYSSCSNDSINVSGTCLTPHRISWRQRIFLKVASPMTNSPSDMQHK
GQLDVNDLLPLSPLPPAMEEDPLASLLQAEDPVVETDGRRRSEDLQNLWKKAIHQQILLL
RMEKENLKLEASRDELKSRKVKLDYDEVGSCQKEVSNLWDKKLNCRTKIRFDMEEIFATL
KEGVTKGKRGEIWQFLSVQYRLRHRLPSKQQPSDVSYNDLLKQLTAQQHAILVDLGRTFP
THPYFSAQLGAGQLSLYNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEQQAFEMLKFLM
YDLGFRKQYRPDMMSLQIQMYQLSRLLHDYQRDLYNHFEENEIAPSLYAAPWFLTLFASQ
FPLGFVARVFDIIFLQGTEVIFKVALCLLSNNEALIMARDSFESIVDFLKSTIPEMTNES
MEKLITQVFEMDISKQLHAYEVEYHVINDEMLEASLPCDDNESFHKMEKSNNQLKRQNMD
LLEKLQVAHTKTQSLESNVENILSRENKLRNLVRSMEEERAAYQNVFELMKKYVPTNVLT
DCDVLLKNALCSPNNRTKPGNKQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaaaagttcagcagccctgtgccaccctctgttggaagcaaacactgtgcca
gccatggctcccaaggaggagaaagggtttggcctgtggtacattggctggtcttcccta
gaccgtcggacaaccttgccaatgcttccttggcttgtggctgagatccgcagaagggca
gaaaagcaagaccctccaggatgtgctgcgccttgtagagaagtcaatctcatgctggtt
acccctcacctccgctgtgtgccagcgctcaatggtgccaataccaacagtgccgtcttc
atctttgagcacaaagcacagcatatatcccgctttatccacaatagccgggatccttct
tattttgcctacctgattaagactcagcctgacaacccggaatctgaaacggcatgccat
gttttcaaggccagtagcccaagacaggtttctgatatcatcagcagcatacgccaaatc
tctaaagtcactctgaaagaagattctaagccctgcagagacagtgaagatgccttttat
aattcacaaaagtatgaagtgttatactgtgggaaagtagttattgcaaataaaaaggca
ccatctacccttgtggatgactgcattgagaaattcagccaacatgaacgccagcgtcta
aagtcactgaccgaacagcagagctcagaatccagcactgatttttctttagctgaaatt
gatgtcccaggttccccttctgatatgtttctagagcaggactctgagaataatatcatc
ccttcttctgggcatcattcagggatttttacagtcggtagtcagagcaatctgcttggt
tcaagagtaacatttcctgagaggattttagaagattctggctttgaagaccagcaagag
tttagaactcggtgcagtagtgttacaattcaaaaaagagtccaagataaaatacagcca
agaagaaggcatgcaagtgcaccaagccatgtccaaccctcagattctgagaagaacaga
acaatgctttttcaggttggccgttttgaaatcaatctcataagccctgatactaaaact
gtggagcttgagaagaatttcaaagatatatcatcatgttctcagggtattaaacacatt
gatcattttggtttggtctgccgtgaatgtgtggagcctgggataaatcagtacatttgt
tatgtttttcaatgtgcatctgaagcattggtggaggaagtcatgctaactttaaaacag
gcattcagcactgcggcggccttacagagtgcaaagacccagatcaagctatgtgaagca
tgtcctatgcatgccttgcacaaactctgtgaacgtatagaaggcctttacccaccaagg
gcaaagcttgtaatacaaaagcagctatctttgctgactgataatgaacaagcggatatc
tttgaacgtgttcagaaaatgaaagccactggtgaccaagaagaaaatgagcttgtgatt
ttgcatctgaggcagctatgtgagacaaagcaaaagacccatgttcatataggagacgta
cagccgaatcttccatgcaacacaattccagaaaacacagctcagagtggcagatttaaa
ctagatattctgaagaacaaggccaagaaatccttgaccagctctttggaaaatatcttt
tcaaggggaacaaataaaatgagaggacgactgggcagtatggacagtttcgaacgttgt
aacagttttacttctgacaaggacggatccccgggggactcacctcctgccacaccacca
tcttcccctgtgtcatcctccttcccgccgtttccagaggaagatcccgactcacctaag
cttcgcagaagagctcacactttcagccatcccacatccagtggcaagcggaggataact
tttcctgacagtaaatcaccgagtgccaggttccccctccagaggcagaattccttagca
aatgatgtgggacaaagcagtgaatgcgaaggacgaaggagaacatactcttcatgtagt
aatgactcaataaatgttagtgggacctgtctcacaccacatcgaatatcgtggcggcag
cggattttcctcaaggtagcatccccaatgaccaactctccatcggatatgcagcataaa
ggtcagcttgatgtgaacgatctgctgccattatctcctcttccacccgcaatggaagag
gaccctctagcttctctccttcaggcagaggacccagtagtagaaacagatggaaggaga
cgttctgaagatcttcagaatctgtggaagaaagcaatccaccagcagatactgttatta
cgaatggaaaaggaaaatctgaagcttgaagcaagcagagatgaactgaaatcccggaaa
gtcaaactggattatgatgaagttggatcatgccaaaaagaagtctcaaatctttgggat
aagaagttgaactgcagaacaaagattcggtttgacatggaagagatttttgccactctt
aaagaaggtgtaacaaaaggcaaacgtggagagatatggcagttcctttctgtgcagtat
cggctcagacatcggctcccaagtaaacagcaaccatctgatgtatcatataatgatctt
ctcaaacaacttacagctcagcaacatgctattcttgtggatttgggaaggacattcccc
acccatccctacttctctgcccagctgggagcaggacagttatccctatataatctgctc
aaagcatactcattattagacaaagaagttggttactgccagggaataagctttgtggct
ggtgtacttcttctgcacatgagtgaacagcaagcttttgaaatgctgaaattccttatg
tatgatctcggcttccgcaagcagtaccgcccagatatgatgtcactacagattcagatg
taccagctttcccggcttctccatgactatcaacgagatctttataaccactttgaggag
aatgaaatcgccccaagcctctatgcagccccttggtttctcacacttttcgcctcacaa
tttcctttaggttttgttgccagagtttttgatataatttttttacaaggaactgaagtc
atcttcaaagtggcactttgtctgctcagtaataatgaagcacttataatggcccgggac
agctttgaaagtattgtggatttcttgaagagtaccataccagaaatgacaaatgaatcc
atggaaaaacttattacacaggtatttgagatggacatttcaaagcaactccatgcttac
gaggttgagtaccatgtcattaatgatgagatgctcgaggcttcccttccttgtgatgac
aacgaatccttccacaagatggaaaaatccaataatcagcttaagagacagaacatggat
ttactggaaaaacttcaggtagcacatactaaaactcagagcttggaatccaatgtggaa
aatattttgtccagagagaataaactgagaaatctagtccgctcgatggaagaagaaaga
gcagcttatcaaaatgtgtttgagctcatgaaaaaatatgtgccgactaacgttctgaca
gactgtgacgttttgttgaaaaatgccttgtgtagtcctaacaacaggaccaagccagga
aacaagcaataa
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