KEGG   Xenopus laevis (African clawed frog): 108709821
Entry
108709821         CDS       T01010                                 
Symbol
tuba1b.S
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04145  Phagosome
xla04210  Apoptosis
xla04530  Tight junction
xla04540  Gap junction
xla04814  Motor proteins
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108709821 (tuba1b.S)
  09143 Cell growth and death
   04210 Apoptosis
    108709821 (tuba1b.S)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108709821 (tuba1b.S)
   04540 Gap junction
    108709821 (tuba1b.S)
  09142 Cell motility
   04814 Motor proteins
    108709821 (tuba1b.S)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108709821 (tuba1b.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108709821 (tuba1b.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    108709821 (tuba1b.S)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    108709821 (tuba1b.S)
   04147 Exosome [BR:xla04147]
    108709821 (tuba1b.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108709821 (tuba1b.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108709821 (tuba1b.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108709821 (tuba1b.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108709821 (tuba1b.S)
  Exosomal proteins of other body fluids (saliva and urine)
   108709821 (tuba1b.S)
  Exosomal proteins of colorectal cancer cells
   108709821 (tuba1b.S)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 108709821
NCBI-ProteinID: XP_018105490
Xenbase: XB-GENE-17345135
UniProt: A0A974DJ73 A0A1L8H9K3
LinkDB
Position
2S:complement(128142158..128147851)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGDGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgttggtcaggctggtgtgcagatcggcaacgcctgc
tgggaactctattgtctggaacatggcatccaacctgatgggcagatgcccagtgataag
accattggaggaggggacgactccttcaacacctttttcagtgaaactggagcaggaaag
catgtccccagggctgtctttgtagacttggaacccactgtcattgatgaggtacgcaca
ggaacataccgccagctgttccacccagagcagttaattaccggaaaggaggatgctgcc
aataactatgcccgtggtcactatactattggtaaagaaattattgatctggttctggac
agagtccgcaaactggctgaccagtgcacaggtctacagggtttcctggtctttcacagc
tttggtggtggcactggttctggattcacctccctgctgatggagcgtctttctgttgat
tatggaaagaagtccaagcttgagttttctatctatccagctcctcaagtttccacagct
gtagttgagccctacaactctatcctcaccacccataccaccctggaacactctgactgt
gctttcatggtagacaatgaggccatttatgatatctgccgcagaaatctagatattgaa
cgtccaacctacaccaacctgaacaggctcattagtcagatagtgtcttctatcacagcc
tctctaaggtttgatggagccctgaatgtagatctcacagagttccagaccaacttggtg
ccctatccccgtattcacttccctcttgctacttatgcccctgtcatctctgcagagaaa
gcttatcatgagcagctttccgtttctgagattacaaatgcctgctttgagccagctaac
cagatggtgaaatgtgaccctcgccatggtaaatatatggcttgttgcctgttgtaccgt
ggtgatgtggtacctaaagatgtaaatgcagctattgccactattaaaacaaagcgtagc
atccagtttgtggactggtgcccaactggtttcaaagttggtatcaattatcagccccca
actgtggttccaggaggagacctggccaaggtgcagcgtgctgtgtgtatgctgagcaat
accactgcaattgctgaggcctgggctcgtctggaccacaagtttgatctcatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaagagggtgagttctctgag
gcccgtgaagacatggctgccctggagaaggattatgaggaggttggtgtagactctgtg
gaaggagatggtgaggaggagggtgaagaatattaa

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