Xenopus laevis (African clawed frog): 108709821
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Entry
108709821 CDS
T01010
Symbol
tuba1b.S
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04210
Apoptosis
xla04530
Tight junction
xla04540
Gap junction
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108709821 (tuba1b.S)
09143 Cell growth and death
04210 Apoptosis
108709821 (tuba1b.S)
09144 Cellular community - eukaryotes
04530 Tight junction
108709821 (tuba1b.S)
04540 Gap junction
108709821 (tuba1b.S)
09142 Cell motility
04814 Motor proteins
108709821 (tuba1b.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108709821 (tuba1b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108709821 (tuba1b.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108709821 (tuba1b.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108709821 (tuba1b.S)
04147 Exosome [BR:
xla04147
]
108709821 (tuba1b.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108709821 (tuba1b.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108709821 (tuba1b.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108709821 (tuba1b.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108709821 (tuba1b.S)
Exosomal proteins of other body fluids (saliva and urine)
108709821 (tuba1b.S)
Exosomal proteins of colorectal cancer cells
108709821 (tuba1b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
108709821
NCBI-ProteinID:
XP_018105490
Xenbase:
XB-GENE-17345135
UniProt:
A0A974DJ73
A0A1L8H9K3
LinkDB
All DBs
Position
2S:complement(128142158..128147851)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGDGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggctggtgtgcagatcggcaacgcctgc
tgggaactctattgtctggaacatggcatccaacctgatgggcagatgcccagtgataag
accattggaggaggggacgactccttcaacacctttttcagtgaaactggagcaggaaag
catgtccccagggctgtctttgtagacttggaacccactgtcattgatgaggtacgcaca
ggaacataccgccagctgttccacccagagcagttaattaccggaaaggaggatgctgcc
aataactatgcccgtggtcactatactattggtaaagaaattattgatctggttctggac
agagtccgcaaactggctgaccagtgcacaggtctacagggtttcctggtctttcacagc
tttggtggtggcactggttctggattcacctccctgctgatggagcgtctttctgttgat
tatggaaagaagtccaagcttgagttttctatctatccagctcctcaagtttccacagct
gtagttgagccctacaactctatcctcaccacccataccaccctggaacactctgactgt
gctttcatggtagacaatgaggccatttatgatatctgccgcagaaatctagatattgaa
cgtccaacctacaccaacctgaacaggctcattagtcagatagtgtcttctatcacagcc
tctctaaggtttgatggagccctgaatgtagatctcacagagttccagaccaacttggtg
ccctatccccgtattcacttccctcttgctacttatgcccctgtcatctctgcagagaaa
gcttatcatgagcagctttccgtttctgagattacaaatgcctgctttgagccagctaac
cagatggtgaaatgtgaccctcgccatggtaaatatatggcttgttgcctgttgtaccgt
ggtgatgtggtacctaaagatgtaaatgcagctattgccactattaaaacaaagcgtagc
atccagtttgtggactggtgcccaactggtttcaaagttggtatcaattatcagccccca
actgtggttccaggaggagacctggccaaggtgcagcgtgctgtgtgtatgctgagcaat
accactgcaattgctgaggcctgggctcgtctggaccacaagtttgatctcatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaagagggtgagttctctgag
gcccgtgaagacatggctgccctggagaaggattatgaggaggttggtgtagactctgtg
gaaggagatggtgaggaggagggtgaagaatattaa
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