Xenopus laevis (African clawed frog): 108709854
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Entry
108709854 CDS
T01010
Symbol
shmt2.S
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00260
Glycine, serine and threonine metabolism
xla00630
Glyoxylate and dicarboxylate metabolism
xla00670
One carbon pool by folate
xla01100
Metabolic pathways
xla01200
Carbon metabolism
xla01230
Biosynthesis of amino acids
xla01240
Biosynthesis of cofactors
xla04981
Folate transport and metabolism
Module
xla_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
108709854 (shmt2.S)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108709854 (shmt2.S)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108709854 (shmt2.S)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
108709854 (shmt2.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
108709854 (shmt2.S)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
108709854
NCBI-ProteinID:
XP_018105549
Xenbase:
XB-GENE-17342715
UniProt:
A0A974HWK3
A0A1L8H9S2
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Position
2S:131430004..131457491
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AA seq
545 aa
AA seq
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MPALCKQFIVMPPCGSVAGVSAHDHTCALIHTGARGRSGVAVLSRGLIEMLTFSIRRLAQ
PLRRCCHVRSQHSQAWTQAGNQVWTGQESLAEGDPEMWNLVQKEKDRQCRGLEMIASENF
CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQQRALHAFDLDPEKWGVNVQ
PYSGSPANFAAYTAVLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIYFESMPYKLNP
GTGLIDYDQLELTARLFRPKLIIAGTSAYARLIDYARMRKVCDEVKAYLLADMAHISGLV
AAGVIPSPFDHADIVTSTTHKTLRGARSGLIFFRKGVKSVDKKTGKEILYNLEDKVNFSV
FPSIQGGPHNHAIAAVAVALKQASSPMFREYAVQVLKNAKSMAAALLSKGYTLVSGGTDN
HLVLVDLRPKGIDGARAERVLELVSVTANKNTCPGDKSALTPGGLRLGAPALTSRNFKEA
DFEKVVDFIDEGIRIGLDVKRKTNKLQDFKNFLLEDKETVNRIAELRKQVEQFARAFPMP
GFDER
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgttatgcaagcagtttattgtgatgcccccttgcggaagcgtggcaggtgtc
agtgcgcatgatcacacgtgtgcattgatccatacgggggcaagaggccggagtggggtt
gcagtgctgtcccggggactaatagaaatgctaacgttttctatacggcgcttggcacag
cccctgaggaggtgttgccatgttcggagtcagcacagccaagcttggacacaggctgga
aaccaagtctggactggacaggaaagtttggcagagggcgatcctgagatgtggaacctt
gtacagaaagagaaggacagacagtgcagagggctggagatgattgcctcagagaatttc
tgtagccgggcagctttggaagcccttggttcctgcctcaacaacaagtattccgagggc
tacccagggaagaggtattatgggggtgcagaggttgtggaccagattgagttactgtgc
caacagcgagctttgcatgcctttgacttggacccagaaaaatggggagttaatgtacag
ccatattcaggctctccagccaattttgcagcatacacagctgtcttacagccacacgat
cgcatcatgggcctagaccttcctgatgggggacatctgactcatgggtacatgtctgat
gtgaaacgcatttctgctacgtccatatattttgaatccatgccttataagttaaatcca
ggaacagggttaatcgattatgaccaactggagttgactgctcgtctcttccgaccaaag
cttatcattgctggaaccagtgcctatgcacgcctaattgactatgctaggatgagaaag
gtctgcgatgaagtgaaagcctaccttctggctgatatggctcatatcagtggactcgta
gcagctggtgtgatcccatctccatttgatcatgctgatattgtaacctccacaacacac
aagactttgcgaggtgcaaggtctgggttaatattcttccgaaaaggtgtcaaatctgtg
gataagaaaactggaaaagaaatactttataacttggaagacaaagtcaacttttcagtc
tttccctcgatccaagggggacctcacaatcatgcaattgcagctgttgctgtggcttta
aagcaggccagttctcctatgttccgtgaatatgcagtacaagtcctaaagaatgccaaa
tccatggccgctgctctgctaagcaagggttacacgctggtgtcaggagggacagataat
cacttggttctagtagacttgagacccaaaggtattgatggtgcaagagcagagagggtg
ctagagcttgtgtcagtaacagcaaataagaatacctgcccgggggacaagagtgcactt
accccaggagggctgcgactaggtgcccctgctctgacatctcggaattttaaagaagct
gactttgaaaaagtggttgattttattgatgaaggtatccgtattgggctggatgttaag
cgcaaaacaaataaactgcaagactttaagaatttccttcttgaggacaaggaaacagtt
aatcggatagcagagctgcgtaagcaagtagagcagtttgcccgtgcttttcccatgccc
ggttttgatgagcgttaa
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