KEGG   Xenopus laevis (African clawed frog): 108709952
Entry
108709952         CDS       T01010                                 
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03410  Base excision repair
xla04140  Autophagy - animal
xla04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108709952
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108709952
  09143 Cell growth and death
   04217 Necroptosis
    108709952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108709952
   03400 DNA repair and recombination proteins [BR:xla03400]
    108709952
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    108709952
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    108709952
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108709952
   MMR (mismatch excision repair)
    Other MMR factors
     108709952
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108709952
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 DUF4023 HMG_box_5 ANAPC15
Other DBs
NCBI-GeneID: 108709952
NCBI-ProteinID: XP_018105749
UniProt: Q6GNQ5 A0A974DJI0
LinkDB
Position
2S:146178754..146188985
AA seq 210 aa
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSKEKTKFE
DMAKADKVRYEREMKSYIPPKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST
IGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYRAKGKPEPAKKAPAKPEKA
KKKEEDDEDDDEEEDDEEEDEEEEEDDDDE
NT seq 633 nt   +upstreamnt  +downstreamnt
atgggtaaaggtgatcctaagaagccaagaggaaaaatgtcctcatatgcttactttgtg
caaacatgcagagaagagcacaagaaaaagcaccctgatgcctctgtaaattttgcagag
ttttctaagaaatgctcagaaaggtggaagactatgtctaaggaaaagacaaagtttgaa
gatatggcaaaagccgacaaagttcgctatgagagggaaatgaaaagttatattccaccc
aaaggagaaacaaaaaagaggttcaaggaccctaatgcaccaaagagaccaccttcagca
ttcttcttgttctgctctgacttccgcccaaaaataaaaggggagcacccaggttcgact
attggagatatagcaaaaaaactgggagagatgtggaataacactgctacagatgacaaa
ctgccctatgaacgaagagctgccaagctgaaggagaaatatgaaaaggatgttgcagca
tatagggctaagggaaagccagaaccagcaaaaaaagctccagccaagccagaaaaagcc
aagaagaaggaggaggatgatgaggatgatgatgaggaagaggatgatgaggaagaagac
gaagaggaggaagaggatgatgatgacgaataa

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