Xenopus laevis (African clawed frog): 108709952
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Entry
108709952 CDS
T01010
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03410
Base excision repair
xla04140
Autophagy - animal
xla04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108709952
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108709952
09143 Cell growth and death
04217 Necroptosis
108709952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108709952
03400 DNA repair and recombination proteins [BR:
xla03400
]
108709952
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108709952
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
108709952
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108709952
MMR (mismatch excision repair)
Other MMR factors
108709952
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108709952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
DUF4023
HMG_box_5
ANAPC15
Motif
Other DBs
NCBI-GeneID:
108709952
NCBI-ProteinID:
XP_018105749
UniProt:
Q6GNQ5
A0A974DJI0
LinkDB
All DBs
Position
2S:146178754..146188985
Genome browser
AA seq
210 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSKEKTKFE
DMAKADKVRYEREMKSYIPPKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST
IGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYRAKGKPEPAKKAPAKPEKA
KKKEEDDEDDDEEEDDEEEDEEEEEDDDDE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaggtgatcctaagaagccaagaggaaaaatgtcctcatatgcttactttgtg
caaacatgcagagaagagcacaagaaaaagcaccctgatgcctctgtaaattttgcagag
ttttctaagaaatgctcagaaaggtggaagactatgtctaaggaaaagacaaagtttgaa
gatatggcaaaagccgacaaagttcgctatgagagggaaatgaaaagttatattccaccc
aaaggagaaacaaaaaagaggttcaaggaccctaatgcaccaaagagaccaccttcagca
ttcttcttgttctgctctgacttccgcccaaaaataaaaggggagcacccaggttcgact
attggagatatagcaaaaaaactgggagagatgtggaataacactgctacagatgacaaa
ctgccctatgaacgaagagctgccaagctgaaggagaaatatgaaaaggatgttgcagca
tatagggctaagggaaagccagaaccagcaaaaaaagctccagccaagccagaaaaagcc
aagaagaaggaggaggatgatgaggatgatgatgaggaagaggatgatgaggaagaagac
gaagaggaggaagaggatgatgatgacgaataa
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