Xenopus laevis (African clawed frog): 108709967
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Entry
108709967 CDS
T01010
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108709967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108709967
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108709967
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_9
SH3_2
PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
108709967
NCBI-ProteinID:
XP_018105769
UniProt:
A0A8J0UQ54
LinkDB
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Position
2S:148775681..148826717
Genome browser
AA seq
1256 aa
AA seq
DB search
MVESMTSLCNGCENGTIAHSQAVDNVDSRTLADGTNHGGEPSTNQEDLHNDNQNSSKLVY
FFTTSKQRTNLNNDRPRSMMAAGNSSTWNALSSLRKMGSFKKLKSSVLQGIQAKENANII
SDPETECQKYTPCRIPISKSMQDGYNLTDGLQSDGSDAEESDNSFLRSTHRSRSIRRAYG
SGRINLSDTGKACSSQSPLRPLSPVGHEHSNCEIIVKDLKGSQVIYRRSKSTDNLHFLKK
SSFKRKSTSNLTDIKSNSEKEIVQKASLSTSPDSDRMATTPERRSKRWRSPIRAKDFDRV
LKIMSNVTDGHWKREGSRCTSPAPEESHRSRPNSRLHDDYSRRVSNSADTERQRSNLNAP
SPVPLAVCRLSYTDSNMDYPDSEAQGKSAESWQCAESLCTEPSNKSDTSSSMQQLDNEVF
YADSEEPKPHTPSASGTPVRPTAPKPQSPSMELYKSAISIHCQNHSTLSLSSMESDERTE
PAAPKLEKSPASFKDSAKLTFYDDGNEDSGISSHSQLSLNAVSEEKREEVDNEEPFKKSP
PQDDEKKADPQKVASRRWNSAKCRSRQRPLSDYGQSAIRSFSIPEDSVATESHETDNGCR
FPSQSFSAELREQEHTPMYQVNYRRRPISVGGVNFFTTSEDEEMGAMLQQPVPRPPIPAH
KVPPYKAVSARLKPFALSQSTPIGLDRVGRQQQLRASNISADGGAESSALVDDNGSEEDY
SYEELCQANPRYLQPGGEQLAINELISDGSVVYAEALWDHVTMDDQELAFKAGDVIRVLE
ASNKDWWWGRIRDREAWFPASFVRLRVNQEDVSENSCSFHEEDHDMTVSKSRHKNAENMG
QMRANVVREIMDTERVYIKHLKDICEGYIKQCRKHTSMFTEGQLNTIFGNIEDIYKFQKK
FLKDLEKKHNKDEPHISDIGDCFLNNQDGFSIYSEYCNNHPSACLELSNLMKQGKYRHFF
EACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNKIKEAYEAMKNVA
CLINERKRRLESIDKIARWQVSIVGWEGQDILARSSELIHSGELTMIIKQGKSQQRTFFL
FDHQLVFCKKDLLRRDILYYKGRIDMDEMVLADVEDGKDRDFNLNIKNAFKAMNRLTDDV
NLFCAKKQEDKQRWIQAFLDERKRVQDDKDMGMEISEDQKKQAMHNAKRSRQGKMKGVSY
NGVPTVPPHQNLHPIHQRHITVPTSIPQQQVFALAEPKRKNSPFWSTITKLAPFKK
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggttgagagtatgacgtcactttgtaatggctgtgagaatggcacaatagctcattct
caggctgttgataatgttgactcgagaactttagctgatgggaccaaccatggtggagaa
cccagcaccaaccaagaggatctgcacaatgataatcagaactcttctaagcttgtgtac
ttttttaccacctcaaaacaacggaccaacttgaataatgaccgccctcgttccatgatg
gctgcgggcaactcatcgacgtggaatgctttgtcttccttgagaaagatgggctccttc
aagaaactcaagtcgtctgttctacagggaatccaagcaaaagaaaatgctaatattata
agtgacccagagactgagtgtcagaagtatacgccctgcagaatacctatatcaaaatcc
atgcaggatggatataatctgaccgatgggttacagtctgacggatcagatgcagaggaa
agcgataactccttcttgaggagcactcatagatctcgcagcatcaggcgcgcctacgga
tctggccgtattaacttatcggatacaggcaaagcttgttcctcacaaagccccctcaga
cccttatcaccagttggccacgagcacagtaactgtgaaatcatagtgaaagacttaaaa
ggcagtcaggttatttacaggcggagtaaaagtacggacaacttgcatttcctcaaaaag
agctcgttcaagcggaaatctacctccaatctaacggacatcaagtccaacagcgagaaa
gaaatcgtacaaaaggcgtcacttagcacttctccagattccgacagaatggccacaact
ccagaaagaaggtcaaagcgatggagaagccccattagggcaaaagactttgaccgggta
ttgaaaataatgagcaatgtcactgatgggcattggaaaagagaggggagtaggtgcaca
tccccggcccctgaggaatcccatagaagtaggccaaatagtcgtttgcatgatgattac
tccaggagagtgtccaacagtgcagacaccgagagacagaggtccaatcttaatgccccc
tccccagttcctctggctgtatgtcgtcttagctatactgattccaacatggattatccg
gactctgaagcccaagggaaatctgcagaaagttggcagtgtgctgaaagcctctgtacg
gaaccctctaataaatctgatacaagcagtagcatgcaacagttggataatgaggttttc
tatgcagacagtgaggaaccaaaacctcacactccatctgcctctggtacccctgtaaga
cccactgctcctaagcctcagagccccagtatggaactgtacaaatcagccatttccatc
cattgccaaaaccacagcactttgtcactgagctcaatggaaagtgatgaaagaacagaa
ccagctgctcctaagcttgagaagagccctgcgtcctttaaagactctgcaaaactgact
ttctatgacgatggcaatgaagatagtggaatcagcagccactctcagctgagtctcaat
gcggtcagtgaagagaaacgagaagaggttgacaatgaagaacccttcaagaaatcgcca
cctcaagatgatgaaaaaaaggctgatcctcaaaaagtggcatctcgaagatggaactct
gcaaaatgcaggtctagacagaggccactgtctgactacggtcagtctgctatccgtagc
ttctccattccagaagattctgttgccacggagtcccatgaaaccgataatgggtgtcga
tttccctcgcagtcttttagtgcggaattgcgggagcaagagcatacccctatgtaccaa
gtgaactatagaagacgtcccatctctgtaggtggggtcaacttttttacaacgagcgag
gatgaagaaatgggagctatgcttcaacaaccagttcctcgacccccaattccagcccac
aaagttcctccatacaaggctgtctctgcccgtttaaaaccttttgccttgtcccaaagc
acgccaataggcctagatcgagttggacgtcaacaacagctaagggcttctaacatttct
gcagatggaggggctgagtcttctgctttggttgatgacaatgggagcgaagaggactat
agctatgaagagctttgccaagccaatcccagatacctgcaaccaggaggagagcagcta
gcaattaatgagttgataagtgatggcagtgtggtgtatgcagaagctctgtgggatcat
gttacaatggatgatcaagaactggccttcaaagcaggagatgtcatccgtgttctcgag
gcttctaataaggactggtggtggggaagaattcgagaccgtgaggcctggtttcctgct
agctttgtacggttacgtgtcaaccaggaggatgtatccgaaaactcttgtagcttccat
gaagaagatcatgacatgactgtttcaaagtcccgccacaagaatgctgagaacatgggc
cagatgagggctaatgtagttcgcgaaataatggacacagagcgggtctacatcaagcat
cttaaagatatctgtgagggatacatcaagcagtgtagaaaacataccagcatgttcaca
gaagggcagctcaacaccatctttggaaacattgaagatatttacaaattccaaaagaag
ttcttaaaagatcttgagaagaaacacaacaaagatgaaccccacataagcgacattggg
gactgctttctcaataatcaagatggcttttccatctactctgagtactgtaacaatcat
cccagtgcgtgcttagagctgtccaacctgatgaagcaagggaagtaccggcacttcttc
gaggcctgcaggcttctgcagcagatgattgatattgctattgatggcttcctgctgacc
cctgtgcagaagatctgtaaataccctctacaactagcagagttactgaagtatacaact
caggagcacagtgattacaacaaaataaaagaagcctacgaagccatgaaaaatgttgcc
tgtctaattaatgagaggaaaaggcggttggaaagtatagacaagattgcccgctggcag
gtttccattgtcggttgggagggacaagatattttggccagaagttcagaactgattcac
tctggagaactgaccatgataattaaacaaggaaagagccaacaaaggacgttcttcctc
tttgaccatcaactggtcttctgcaagaaagatctgttgcgcagggacatcctgtattac
aaggggagaattgacatggacgagatggtgttggcggatgttgaagacgggaaagatcgg
gactttaatctgaatatcaagaatgcatttaaagccatgaatcgattaacagacgacgtc
aatcttttttgtgcaaagaaacaagaggacaaacagaggtggatccaggcctttctggat
gaaaggaaaagagttcaggatgacaaagatatggggatggagatctcagaagaccaaaag
aagcaagccatgcacaatgccaagagatcaaggcaagggaagatgaaaggggtatcttac
aatggagttccaactgtgccccctcatcagaacttacacccgatccatcagcgtcacatc
accgtgcctaccagcattcctcagcagcaggtatttgcacttgcagaacccaaacgcaag
aattctcctttctggagcacaatcaccaagcttgctccattcaagaaataa
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