Xenopus laevis (African clawed frog): 108710064
Help
Entry
108710064 CDS
T01010
Symbol
arfgap1l.S
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108710064 (arfgap1l.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108710064 (arfgap1l.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108710064 (arfgap1l.S)
Endosome - Golgi transport
Arf GTPase associated proteins
108710064 (arfgap1l.S)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108710064 (arfgap1l.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
SAM_1
PH_6
SAM_2
PH_11
RA
PH_3
PH_13
PH_8
SOS1_NGEF_PH
PH_9
SAM_TNK
SAM_EPH
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
108710064
NCBI-ProteinID:
XP_018105940
Xenbase:
XB-GENE-22169579
UniProt:
A0A8J0UQJ3
LinkDB
All DBs
Position
2S:complement(167322569..167415140)
Genome browser
AA seq
1656 aa
AA seq
DB search
MSEGPCFISEWLHTLKLEQYLELFEEHGLYTVADLRALSDEELTKIGVMLPGHRKRILGF
LQKSMSLEYPTEEVACRPVPMKRNVFKGGTTSSNQAVPPSVPNNWASLEDSEQRGQIRVP
PPIPPRKGCAPPFKFSITPPSSTSPLLLQDSPPLEKAVCPPAVNLQSTESKSHPEEKQVE
GSVQLVAPPLPAKRHKVENKSPSKSPPSLPVCPPVVPPRTHVTLLSSSPPSEAKGKAIEE
IPDVFPIIAPKPFPKVPPRDLPPKQVAPREVPQPPREVPQPPTEVPQPPTEVPQPPTEVP
QPPTEVPQPPTEVIIPPREVIIPPREVIIPPREVIPPVKEVLPKDNPSAPREVILPPREV
VLPTRDVELSCRDVIPPTREVIPISREVVPQPTEITPAPREIVPPPRDFVLPHREVTQVL
RPPPREVIPTHLKPEPAERDLGTLYEMTGEIDGVILTGFYSLKSSNLVSDDEQIDDASDY
EDTPSIIRSDSDISACQSSSSLSSGVSSTHSYSGSMDDTNSTQHSVIIKTGWLDKNPPQG
SYIFQKRWVKLDLDYLRYYESEKDMYSNGFIKTNFISEVTPCGDQKFEVRTSNRDFVFRA
ESDADRNDWVKAFKQVVQEKRNRLSTYQPVAASSVGADKSGLLELRGFRNKVYVEVVMDK
VFLYKSAEDRASGVGLKFIDMNLGSVKDCDRRSFDLTTPYKTFSFSSDSESEKADWVEAM
LQSIGEALSNLEVAQKIWSVEGNRRCSDCNGSNPDWASINLCVVMCKRCAGEHRSLGPNI
SKVRSLKMDHKVWTPELIELFQKVGNAISNRFWAANVPPSEAIDVTSSTQERKKFILAKY
REGKYRQYHQLFGNQAELDKALCAAVTTSDLAETQALLFCGADVNCSTCDPAYPTPIKLA
EQAGQRLQTEFLMQNRMSEIPRLELGTNIEKEYYVVRPNITHNGFLHKTSSMNRLVTERK
SKEEFSRRWCVLSDGVFSYYENNLSSTPNGEIKMGEIVCVAVNPTDTHGFESTFEIYTQS
ERLYLFAAETPEEAREWVKSITKCFLPLRAEELLSYDFDRIGRLQYKGGLSLERTTIGWF
SLYKTKLYMYLEDGDTVDVIHLKKLSELSIKDKDILVLVAKGRITYILAARKLDFSGWVN
AIQKASSSTGDTLSEQQLTGSDVPVLVHKCIDHISQFGMASEGIYRKSGQTSKTTSLLEA
LKKDARTVVLKEDEHHVDNVSDTLKRFFRGLEEGIFGEHCQDWLNVPGIDDECMRFGRYQ
ELLQNLPQVNRATLKALITHLYCIKHFSDENQMNVHNLAIVFGPTLFQTDGQNYKPGRVV
EDLITYFRPIFGVSEQELQKQLNVIKAIIKLRDTGKPKHQSPAFICTVYLEEKGKKSEHS
VQIPANMSAEELTKTVLGMRGIHSEATDYWGCSEVDEIEETERPLHFSEKVLHIFHSDRA
NCNLVVKKHEHMDAMLTYINSRVGDSKNGPIKFREEKSLLGFGVAFHERYFMLNSTMLRM
YREIRSGRRASLSAESESHRAEKEWPMKNLTIYLGIKKKMRPPSRNEKCKSDKNDKQEKT
QCLGFTVVYKNDKQEKTQWYLAFDTEKDMREWFAALTFVQHGSLWPEEGAILRPLRTNLE
TRLGNMSLIPIRGNENDIRRSLSQLTIDPVSLLGNV
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggggccctgtttcatatcggagtggctccacactctcaagctggagcagtac
ctggagctctttgaggaacatggtttgtacacagttgcagacttaagggccctcagtgat
gaggaactgaccaaaataggggttatgttgcccggacaccggaagcgcattcttggattt
ctccaaaaatccatgtctttggaatatccaacagaagaggtggcgtgtagaccagtgccc
atgaaaaggaatgtgtttaaaggtggtaccaccagcagtaaccaggcagtgcctccctct
gtgcccaacaactgggcgtctttagaggattctgagcaaagaggacagatacgggtgccg
ccacccatccccccaagaaagggatgtgctcctcctttcaaattttccatcactcctccc
agtagcacctccccactgctactccaggactccccaccattagaaaaggccgtgtgtcca
ccagctgtcaatcttcaaagcactgaatccaaatctcatcctgaggaaaagcaggttgag
gggagtgtccaattggtagctccacccctgcccgccaagcgtcataaggtagagaacaag
agtccaagcaagagccccccgtctttaccagtgtgccctcctgtggtgcctccaaggact
cacgtcactctcttgtccagcagtcctccttccgaagctaaaggaaaagctattgaagaa
attccagacgtctttcctattattgcccctaaaccctttcccaaagttccacctagagat
cttcctccaaaacaagttgcaccaagagaggttccacaaccacccagagaggttccacaa
ccacccacagaggttccacaaccacccacagaggtcccacaaccacccacagaggtccca
caaccacccacagaggtcccacaaccacccacagaggtcataattccacccagagaggtc
ataattccacccagagaggtcataattccacccagagaggtcataccaccggtcaaagag
gtactgccaaaagataacccatcagcacccagagaggtcatattgccacctagggaggtt
gtactaccaaccagagatgttgaactatcatgcagagatgtaattccaccaaccagagaa
gtcataccaatatccagagaggttgtaccacaaccaacagagatcacgccagcaccaaga
gagattgtaccaccaccaagagactttgtgctaccacacagagaggtcacacaggtactg
agaccaccacctagagaagtgattcccactcatctgaaaccagagcctgccgagagggat
ttagggacgctgtatgaaatgactggggagattgatggcgttatcctcaccgggttctat
agtttaaagtccagcaacttggtgagtgatgatgagcagattgatgatgcgtcggattac
gaggatactccatccattattcggagtgacagtgacatcagcgcttgccagtccagcagt
tccctttcctcgggggtctccagcacccacagctacagcggcagtatggacgataccaac
tccactcagcactcggtgattatcaaaactgggtggttggacaagaacccgccgcaaggg
tcgtacattttccagaagcgatgggtgaagctggacctggattatctccgatactatgaa
agtgaaaaggacatgtattctaatggcttcatcaaaaccaatttcatatctgaagtcact
ccctgcggggatcagaaatttgaagtcagaacctctaaccgggactttgtcttccgggct
gagagtgatgcggatcgaaatgactgggtgaaagccttcaagcaggtggtgcaggagaag
cggaaccgattatctacttaccagccagtggccgcgagctctgtgggtgccgacaagagt
ggcctcctggaactgagaggatttaggaacaaggtgtatgtggaggtggtgatggataag
gtgttcctgtacaagagcgccgaggatcgtgcgtccggggtcggattaaagttcattgat
atgaacctcggcagtgtgaaggattgtgataggaggagctttgacctgacaactccttac
aagactttcagtttctcgtcagacagtgagtcggagaaggctgattgggtggaagccatg
ttgcagtctatcggagaagcactttccaaccttgaagtcgcccagaagatctggtcggta
gaagggaaccggcgctgctccgactgtaatgggtccaatccagactgggcctccatcaac
ctgtgtgtagtgatgtgcaagcgatgcgcgggggagcaccgaagcctcgggccaaacatc
agcaaagtgcggagtctcaaaatggaccataaagtttggacaccggagctgatagagctc
ttccagaaagtgggaaatgcgataagcaacaggttctgggcggccaatgtgccccccagt
gaagccattgatgtgacgagcagcacgcaggagaggaaaaagttcatcttggctaaatat
cgggagggaaagtaccggcagtatcaccagctctttggaaatcaggccgagctcgacaag
gctctgtgtgccgcagtgaccacgagtgatctggccgagactcaggcattgttgttctgc
ggggcagatgtgaactgcagcacctgtgaccccgcttacccgacccccatcaaattggcg
gagcaggcgggacagaggctgcaaacggaattcctgatgcagaaccgaatgtcggaaatc
cctcgcctagagctggggaccaacatagagaaggaatattatgttgtgcgccccaacatc
acccacaatggcttcctgcacaaaacctcatctatgaaccgattggtcaccgaaagaaag
tccaaggaagagttcagccggcgctggtgtgtcctcagtgatggggttttcagttactat
gagaacaacctcagctccactcccaatggcgagattaaaatgggggagattgtgtgcgtt
gcggtgaaccctacagacactcatgggttcgaaagcacttttgaaatttacacccagtcg
gagcgtctctatctgtttgcggcagaaaccccagaggaagccagagaatgggtgaaatcc
atcactaagtgtttccttccccttagagccgaggagcttctcagttacgactttgaccgg
attgggcggctgcagtacaagggggggctgagcctggagcgcaccaccatcggctggttc
tccctctataagaccaaactctacatgtatctggaggacggggacacggtggacgtcatt
cacctgaagaagctgtcggaactctcgatcaaggataaagatattctggtactggtggcc
aaaggcaggataacatatattctggcagccaggaagttggatttttctggctgggtgaat
gcgatccagaaggcgagtagctccacgggggatacgttatcagagcagcagctgacgggt
tccgacgttcctgtgctggtgcacaagtgcattgatcacatatcccagtttggtatggcc
tcagaagggatctacaggaagagtgggcaaacctctaagactacaagcctcctggaagcc
ctgaagaaggacgcacgcacagtggtgctcaaagaagatgaacatcacgttgataatgtc
tccgacaccctgaagaggttctttaggggactggaggagggaatctttggagaacactgt
caggactggttaaatgtaccaggaatagacgacgagtgcatgagatttggaaggtaccag
gaacttctgcagaacctgccccaagtcaacagagctactctcaaagcactaattactcac
ttatactgcattaagcacttttcggatgagaatcaaatgaacgtccataacttggccatt
gtgtttggccccacgctcttccagacggacggacaaaactacaagccgggacgtgtggtc
gaagatctcatcacctacttccgacccatatttggagtcagtgagcaggagttgcagaag
cagctgaatgtcatcaaggccatcatcaaactgagagacacggggaaacccaaacaccag
agcccagcttttatctgcacggtttatctggaagagaagggtaagaaatcagaacacagc
gtgcagattcccgccaacatgtcggcagaagagctgacaaagacggttcttgggatgagg
ggcatccacagcgaggcgactgattactgggggtgctccgaggtggacgagattgaggag
acagagcggcccctgcacttctctgagaaggttctgcacatcttccactccgaccgggcc
aactgcaacctggttgtaaagaagcacgaacacatggacgccatgctcacgtatatcaac
agccgagtgggagattccaagaatgggccgataaagttccgcgaggagaagagcctcctg
ggcttcggtgttgccttccacgagcgatacttcatgctgaatagcaccatgttgcgcatg
tacagggaaatacggagcggcaggcgggcgagtctgtctgcggagagtgagagtcaccgg
gcggagaaggagtggccaatgaaaaacctcaccatttatttgggcatcaagaagaaaatg
cgtccgcccagcaggaatgagaagtgtaagtctgacaagaatgacaagcaggagaagaca
caatgcctgggatttactgttgtgtataagaatgacaagcaggagaagacacaatggtac
ctggcctttgatactgagaaagacatgagggagtggtttgcggcattaacctttgttcag
cacggcagtctgtggccagaggagggggctatactgcggccactgaggacaaatttggag
accaggctggggaacatgtccctcatccctatacgaggcaacgagaatgacataaggagg
agcctgtcacaattaaccatagatccagtctcccttctcggcaatgtatga
DBGET
integrated database retrieval system
