Xenopus laevis (African clawed frog): 108710101
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Entry
108710101 CDS
T01010
Symbol
vps16.S
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108710101 (vps16.S)
04148 Efferocytosis
108710101 (vps16.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108710101 (vps16.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108710101 (vps16.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108710101 (vps16.S)
Hops complex
108710101 (vps16.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Reprolysin
Motif
Other DBs
NCBI-GeneID:
108710101
NCBI-ProteinID:
XP_018105996
Xenbase:
XB-GENE-6487194
UniProt:
A0A1L8HBP7
A0A974HX29
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All DBs
Position
2S:168940409..168943915
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AA seq
836 aa
AA seq
DB search
MDFYTANWFPLGSVNYRKFDLYHMEWELREGLRESLAAAGPYAGTVALMRNPCAKEKAGR
PVLEIYSASGLLLSSIPWKSGLVVHLGWSLSQELVCIQEDGTVLLYDLFCSFKRNFSLGS
EVKQNQVLEAKVFHTEYRTGIAILTGALKFTIASNIDDVKLRRLPEIPGLRGPPSCWTVL
FNERVALVLAAVGPDLYLLDNTSCTAVTLPHISPMAGSFLQMAVSFNYKYLAAFTDTGYI
WMGTASLTDKLCEFTSDIRQAPKQMAWCIRPGSRNIALAVMWEKLLFLVGRASEGVHFPL
DEPSFLVPELDGVRIISPSTHEFLHEIPKVTEDIFKIASMAPGALLLEAQKEYEKESQKA
DDYLREIKDQNLLSEAVENCIEAAGYEHAPEMQKSLLRAASFGKCFVEKYSPADFVTMCQ
DLRILNAIHDYQIGMPLTITQYKQLTVQVLLDRLVLRRLYPLALKICEYLKFSDFQGVSR
ILAHWACYKVQQKEKSDDEIAQAINQKLGDTLGISYSEIASRACECGRTELAIKLLEYEP
KSEDQVPLLLKMKRSNLALAKAIESGDTDLVYTVVTYMKNEFNRGDFFMTLQNHPVALSL
YRQFCKHQEPETLKDLYNQDDNHLELGNFYVRSSYSTEKRVEGRVAELQNAVEEYNKAKS
ELAARATEDQIKLLRNQRALQDKVDKPYLDFSLHDTVYNLILEGMHKKAEQLYKEFKIPD
KRYWWLKISALSEKEDWEELEKFSKSKKSAIGYLPFVEICMKHHNKLEARKYIGRVAIEQ
RVKACLLVGDLDQAAESAIEHRNEHEMNLVLSRCTSAADNAVAEKINRAKSQILKK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggatttctatacggccaactggttccccctgggcagtgtgaattaccggaagttcgat
ctgtaccacatggagtgggagctgagggagggattgagagagagtctggcggctgctggg
ccctacgctgggactgtggctttaatgaggaatccgtgtgccaaggagaaggctggccgg
cccgtactggagatctactcggcctccggcctcctcttgtcctccatcccatggaagagc
ggcctggtggtgcatttgggttggagcctgagccaggagctggtctgtatccaggaggac
ggcacggtgcttctctacgacttattctgctcgttcaagcgcaacttcagcctgggcagt
gaggtgaaacagaaccaggtgctggaggccaaagtctttcacaccgagtacagaaccggc
atcgccatcttaacgggcgcactcaaattcaccattgcctccaacatcgacgacgtgaaa
ctgcgcaggttgcccgaaatacccggccttaggggcccaccctcctgctggactgtcctg
ttcaatgagcgcgtggctctagtgttggctgcagtgggcccagacttgtaccttctggat
aatacctcctgcactgctgtcacactgccccatatcagccccatggccggatccttccta
caaatggccgtctccttcaattataaataccttgcagccttcacagacactggctacatc
tggatgggcactgcttccctcacggataaactatgtgagtttacctctgatatccggcag
gcaccaaaacaaatggcctggtgtataaggcccggcagcaggaacattgcacttgcagta
atgtgggagaaactcctgttcttggtgggccgtgccagtgagggcgttcacttccctttg
gatgagccgtcgtttctcgtgcccgaactggatggggttagaattatatctccctccacc
catgaatttctccatgaaataccaaaagtaactgaggacatttttaaaattgcgtctatg
gcgcctggagcacttttacttgaagcacaaaaagaatatgagaaagagagccagaaagcg
gacgactatctacgggagattaaggaccagaaccttctgtcagaagcagtggagaactgc
atagaagccgctgggtatgagcatgcccctgagatgcaaaagtctctccttagagcggct
tcatttggaaaatgctttgtagaaaaatattctcctgcagactttgtgaccatgtgccaa
gatctgcgtatcctcaatgccatccatgactaccagattggcatgccactgactattaca
cagtacaagcaacttactgtacaggttctgttggacagattagtcttacgcagactctat
cctcttgctctcaaaatttgcgaatatctaaaattttctgactttcagggagttagtcgg
attttagcccattgggcttgttacaaagtgcaacagaaggagaaatctgacgatgaaata
gcgcaggccattaatcagaagctcggagacaccctgggaatttcctactctgagattgcc
tccagggcctgtgagtgtggtaggactgagttggccattaaactcttggagtatgaacca
aagtcagaagatcaggtccccttgcttttaaagatgaagagaagcaacttggccctggcc
aaagctattgagagtggagacacggatctggtctatactgtggtcacttacatgaagaat
gagtttaaccggggcgacttctttatgacgctgcagaaccacccggtggctttgagttta
tatagacagttctgcaagcaccaagagccagagacactgaaggacctttacaatcaggat
gacaatcatctggagctgggtaatttctatgtccgatccagttacagcacagagaaaaga
gtggaaggccgtgttgccgagctccaaaatgctgtagaggagtacaataaagctaaaagt
gaactggcggccagggccaccgaggatcagatcaagctgctaaggaaccagcgggccctg
caagataaggtggacaagccgtatctggacttctcgcttcatgacactgtttataatctt
atactggaaggcatgcacaaaaaagcagagcaactttacaaagagttcaaaatccctgac
aagaggtactggtggctcaaaatctctgctttatcggaaaaagaagactgggaggagctt
gagaagttctcgaaaagtaagaagtcagccattggttatctgccctttgttgagatttgt
atgaagcatcacaacaagttggaggccaggaagtacattgggcgggtggccattgagcag
agggtcaaagcctgtctcttggtcggggacttggatcaagctgctgaaagtgccatcgaa
caccgaaatgagcatgaaatgaatctggtgttgtcccgctgcacctctgccgctgataat
gccgttgcagaaaagatcaaccgtgccaaatcacagatccttaagaaatag
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