Xenopus laevis (African clawed frog): 108710148
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Entry
108710148 CDS
T01010
Symbol
sec24b.L
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108710148 (sec24b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108710148 (sec24b.L)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108710148 (sec24b.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
DUF3536
Motif
Other DBs
NCBI-GeneID:
108710148
NCBI-ProteinID:
XP_018106773
Xenbase:
XB-GENE-17345068
UniProt:
A0A1L8HUR0
A0A974DYZ8
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Position
1L:71419219..71459797
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AA seq
1098 aa
AA seq
DB search
MLSQNSMPQHKPSLVNTNNLSHQFYHSPSPGHDIPASQKPAEGIGLSATQGPPGVLQPYP
TFTGNHSYASYPGNPSYTPQGLSGYSDHISSSVSSQHYSGAQYASSSASTQYSQVIYSHN
VHACAQVTNTTQNVQTSGGSSLLHQDLKRHNTTPVSTVDQLGAWDVHMQNHGAPSSFGQQ
NIHSDTQSPRPAAVISPASFHHSTLQEGMQFGGYNHANSAPTPSSSSSEDEEEEDEEAGF
ESSSTTSTASLEPTNYDVLEGGGYTEPTSTTSTPAFINPVSQASKQTKPVGQVYPALQPG
YQNAAPPHGSQSSSPIHRPSYPQYNSNYSGLNQLPASLGGLSLQQAQQPEGLRPINLIQD
RNLLPILNVPAPIPNLNSDLKRLNCNPNSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRS
KPRIPVLSPSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRINDVPEEFMYNPVTRSYGE
PHKRPEVQNSSVEFIASSDYMLRPPPPAVYLFVLDVSYNAIESGYLRVFSQSLLDNLDKL
RGDSRTKIGFITFDSTVHFYNLQEGLSQPQMLMVTDIEDIFLPTPDGLLVNMHESKELIK
DLLTALPSMFANTRETHSALGPALQGAVKLMSPTGGRISVFQTQLPSLGAGLLQSREDPN
QRSSTKGVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCVYY
YPMFHHTHNLAQAEKLKKDLDHYLTRKIGFEAVMRIRCTKGLSIHTFHGNLFVRSTDLLS
LANIHEDAGFAVQMSIEESLTDTSLACFQVALLYTSRKGQRRIRVHTLCLPVVNSLPDVF
AGADVQAITCLLANMAVDRSISSSLSDARDALVNAVVDSLASYSSTLSNLQQSTLISPNS
LRMFPLYMLALLKQKAFRTGTSTRLDDRVFAMSHMKCQPVGRLMKMIHPHLYRIDRLTDE
GAIHVNDCVVPQPSLQSLSAEKLSREGAFLMDSGLSLYIWIGRNCSNSFLSDVLGFPNYA
SVPQKLTCLPDLNTTASERLRNFISWLKEDSPLNPVLYVIKDDSAAKTNFFQHLIEDRTE
AAFSYYEFLLHIQQQVCK
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcaaaattctatgccacagcataaaccaagtttagtaaatacaaacaattta
tcccatcagttttaccatagtccatctccaggccatgatattccagcttcacaaaaacca
gccgaggggataggtctttctgccacccagggacctcctggtgttttacaaccataccca
acatttactggcaatcacagctatgcttcttatcctggtaacccctcgtatacacctcag
ggattatccggttattctgatcacatttcttcatctgtgtctagccaacactattcagga
gctcagtatgcaagttcatctgctagcacgcagtatagccaagtgatatactcccacaat
gttcatgcatgtgctcaggtgactaacacaacccaaaatgtgcaaacatctgggggctct
tctctacttcatcaggacttgaagaggcacaatacaacccctgtgtccactgtagatcaa
ctgggtgcctgggatgttcacatgcagaatcatggtgcaccttcatcctttggacaacag
aatattcattcagacacccaatcaccaagacctgcagctgtaatatctcctgcatccttc
catcattcaacactgcaagaaggcatgcagtttggtggatataatcatgctaactctgca
ccaactccctcttcatctagttcagaggatgaagaggaggaggatgaggaagcaggtttt
gaaagctcctcaacaaccagcacagcatccctagagcccacaaactatgatgtcttagaa
ggaggaggttatacagaaccaacttcaacaaccagcactccagcctttatcaaccccgtt
tcacaagcatcaaagcagaccaagccagttggccaagtatatccggctcttcaacctggt
tatcagaatgctgctcccccacatggctctcagtccagttctccgatacaccggcctagc
tatccgcaatataattctaattacagtgggttgaaccagctgcctgcttcccttggagga
ttaagccttcaacaggctcagcagccagaaggcctgcgtcctataaaccttatccaagat
cgaaatctccttcctatattgaatgtgccggctccaattcccaacctaaattcagatctg
aaaaggttaaactgcaaccccaattcatttagatgcacactgacaaatattccacagaca
caagctctcttgaacaaagctaagcttcctttaggattactacttcatcccttcagaagc
aaaccgcggataccagtcttatctcctagcacaattgtgaggtgcaggtcttgcagaaca
tatattaatccctttgtatcatttattgaccagaggaggtggaaatgcaacctatgctac
aggataaatgatgtaccagaagaatttatgtataacccagtgactcgatcctatggggag
cctcacaaacgtccagaggttcagaattcatcggtggagtttattgcttcgtctgactat
atgctacggcctcctccaccggcagtatatctgtttgttctggatgtctcgtacaatgct
attgaatctggatacttgagggtcttttcccagtcccttctggataatttggacaagcta
cgaggagattcccgaaccaaaataggatttattacttttgacagtactgttcatttttac
aatttacaagaaggcctttctcaaccccagatgttgatggttacagatattgaagatatt
ttcttgcctacacctgatggtttgcttgtaaatatgcatgaaagcaaagagctcatcaag
gatctgttaactgctttgcccagcatgtttgccaacacaagagaaacgcatagtgctcta
ggtcctgcccttcaaggagctgtcaaattgatgtctcctacaggaggcagaatttcagtt
tttcaaactcagctgccatctttaggagcaggacttttgcagtcaagagaggatccaaat
caaagatcaagtactaagggggtgcaacatctgggcccagccactgacttttacaagaaa
ttagcactggactgctcaggacaacaaactgctgtggatttgtttttgttaagttcccaa
tattctgaccttgcctcactagcttgtatgtcaaaatattctgcaggatgtgtatattat
taccccatgttccaccatacccataatttagctcaggcagaaaagctgaagaaagatctt
gatcattatctcacaagaaagattggatttgaagctgttatgagaatacgatgtactaaa
ggtctctcaatacacactttccatgggaatttatttgtacgttctacggatcttctgtca
cttgctaatattcatgaagatgctgggtttgcagtacaaatgtctattgaggaaagccta
acggacacgtctttggcttgttttcaagttgcgcttctttatacatctcgcaaaggtcag
cgtaggattcgtgtccacacattgtgcttgccagtcgtaaattcactgcctgatgtgttt
gccggagcagatgttcaagcaattacctgccttttggcaaatatggctgtagacaggtca
atttcctcaagtctttctgatgcaagagatgctttagtaaatgcagtagtagattcattg
gcgtcctacagttcgacactttcaaaccttcagcagtccacattgatttcaccaaattct
ctcagaatgtttccactttatatgttggcactcctgaaacagaaagccttcagaactggc
actagcacacgactggacgatagagtgtttgcaatgtctcatatgaaatgtcagccagtt
ggccgtctaatgaagatgattcatccacacctctacagaatagacagacttaccgatgag
ggtgctattcatgtaaatgactgtgttgtgccacaaccttctcttcagtctttatcagca
gaaaaactgtcaagggaaggggcattccttatggattctggtttgtctctctacatttgg
ataggaaggaattgttcaaatagctttttaagtgatgttcttggatttccaaactatgca
tccgttccacagaaattgacctgtctcccagatttaaacacaacagcatcagaaagactg
agaaattttatttcatggctcaaagaagatagtccattaaaccctgttctgtatgtaata
aaggacgacagtgcagcaaagactaacttctttcaacatttaattgaagaccggacggaa
gctgcattttcatactacgagttcctgcttcatattcagcagcaagtttgcaagtga
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