Xenopus laevis (African clawed frog): 108710239
Help
Entry
108710239 CDS
T01010
Symbol
cfap43.L
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108710239 (cfap43.L)
Cilium and associated proteins [BR:
xla03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
108710239 (cfap43.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
CFAP43_N
WDR90_beta-prop_4th
RMC1_N
Motif
Other DBs
NCBI-GeneID:
108710239
NCBI-ProteinID:
XP_041442159
Xenbase:
XB-GENE-6486681
UniProt:
A0A8J1MK67
LinkDB
All DBs
Position
3L:52881954..52936511
Genome browser
AA seq
1661 aa
AA seq
DB search
MENSGCALEVRWVQGINKKKVTFINDHTVCYPCGNFIVFHDTNTGKWSFLQCTTGSTGAF
AVNTYSEVVAFSDQKLHPTIYVYTFPGFVKRAELKDGAQLDYSLIAFSHAAPYLASYSSI
PDHVLTIWNWQESIPLCSKSDSQTTYTTLTFNPMNWHQLCLSSERSLTVWNIEICDNQYQ
LKAMPVKLPSEDGTTDIEEENLNSHTSNSVSYYGPLMPTSAVAGLVGDEAEIFIPKEQRK
HSVQPSFHCWNATSDLYVGCAGGQILSISAETQKVTILAQKDQSADHLSRTTLLEGNIKT
MAFHKEGLYVAGNDGVLHLFTIKGSEVKLEDSWNAQEPIDSISFSPSYKTLSITTSKGSL
YLYNQRNPEETYKLLNVYSRDLLAADFLTFGNKYCLGTDISGHVQLWSVEDGKSVSSLNL
NIQATAMACCPSSNYAAVGSSTGHIYFIDAVKTEAPRIVQRTRLYCVPVQHMHFDPRGNF
LLTGAADRHIFILDARPSYSFQVLGYIVVCGEILTLSSLSSADTQQTKVMALVCPVDERK
EEKGGTQLEMFSLPLQMLSSPSEYIDERGMFKDTMIQKISYDVDQPLFSAVMGYNSSSVF
GYSSNETILLKYVIHKDISGSPVTALVAEKVVRGSQLGPGVLCLSPHLKWMAVSGRDGIV
YVKDLLNMETMAQLQCHSYHNGGINSLAFSLDGQSIVTTGTCDGALVCLQWKSSGRSSSR
LGLAGEYGKDLALSLQAAMKEEDQALSRMPVWTADADSLGVERKGKEYSQLSVDVTEQDS
FPNTSANDVTWIKRKLEEAEKKETEKYAAEKEVIKTGIKKLRKTIQAMMRENESLPDIEK
LDQQEFNLDTEEQERLYLDSEKEVARVRQEIELENLSKQYLREVIKQECWDSMAVKGRSV
TAFHTGYEVMNYPMKERTPKELEKFARVLNLMKIEAVDLKVRKEIVETQPKIGPDDEEEV
EEELMKCQDSSSLVGSLSDHYGGDTSCLYSQLILHSREEKINQIILLQDIIQNIKNAFNK
DFDTVCRQKEQEITRVMERNNRIQEIMVELNLQEKLLEPTFTDNEKPERALTVDDSEVKV
ERYLTPEQKAKAEHLAKVEEAKRLAAQEDNAKQRALDDMMGGVLEVKKEDILRMEVPQPV
FLARTEAEWTEEEKKQFKEYEKKCKDLSEEKEKYSKVLEAEMKKMQLSVIETTQSFDDVL
ARLFEKKVKSEMTIYQEELKINNLLFSLLIEEEINTRVAHLAYILDKKRKQKNQTAEIVK
SFKSQVMAFRESYDNLVAEDKLLDRGFKKEFSDITSYQVDQLYKLYKRRPRVQRLRTQAD
STAPFGERPGSAKAYKDSIALLMHAMDELDTPENVPEGVELPVWQRFCLARRSKIEYEQQ
VKIKALVLAEMQAFLDKRIEEDEKMRQDIENFMQELNVLRNEKMKFQLDLTVQFLLKQGQ
VELENTDLIPSFEDAILLHRSVIEDLNSTIKGLGEQKIASMVESKDFRKGIFQLEWEHRK
IRMEMEDLEKKSRDISLLHVSKEFQVFLNEQNYDKRMSDQIQVLEETINAQEKQHGKNVK
TYKKILKDLETHINKKIIANLELDKDLQELLVSFSERKHIYDVVGVEQSTEKAAKERYME
IIQRRKLVDLAKIQAQEIHELRSEVDRLRMKTFPALVQMEY
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactccggctgtgctctggaagttagatgggtacaaggaattaacaagaagaaa
gtaacattcatcaatgaccacacagtatgctatccatgtgggaactttattgtgtttcat
gacacaaacacggggaagtggtcctttttgcagtgcacgacgggaagcacaggagcattt
gcagttaacacctacagtgaagtggttgctttttcagatcagaagcttcatcccactatt
tatgtttacacatttcctggatttgttaaacgagctgaacttaaagatggagcacaactg
gattattctttaattgcatttagccatgctgcaccttatttggctagttattcctccatt
cctgaccatgtacttacaatctggaactggcaggaaagtattcctctatgcagcaagtca
gactcccaaactacatatactaccttgacctttaatcctatgaattggcaccaactttgt
ttgtccagtgagagatctcttactgtgtggaacattgaaatatgtgacaaccaataccag
ctgaaagcaatgccagtcaaacttcccagtgaggatggtacaactgacatagaggaggag
aatctcaattctcatacatccaacagcgtgtcctattatgggcctctaatgccaacatct
gcagttgctggattagtgggtgatgaagcggagatctttattcctaaagaacaaagaaaa
cactctgtccagccaagtttccattgctggaatgccacctctgatttgtatgtgggttgt
gcgggaggacagatactatccatcagcgctgagacacagaaagtcactatactggcccaa
aaagaccaaagcgcagatcatttgtctcggactactcttctagagggaaacataaagaca
atggcgtttcacaaagaaggactctatgtagctgggaatgatggcgtgttgcatttattt
acaataaaaggttcagaagtaaaacttgaagacagctggaatgcgcaggaaccaatcgac
agcatcagtttctctcccagttacaagacgctctccattacaaccagtaagggatcctta
tatctctacaatcaaagaaatcctgaagaaacatataaactattaaatgtgtacagtcga
gacttgcttgctgctgatttcttgacctttggcaacaaatactgcttaggcacagacata
tcaggacatgtgcagttatggtcagtggaggatggaaaaagcgtaagctctctcaacctt
aatatacaggccactgccatggcatgctgcccctcatctaactatgcagctgtaggtagc
agcactgggcatatctattttattgatgctgtcaaaacagaagctccacgaattgttcag
agaacaagactttattgtgttcctgtgcaacacatgcattttgatccaaggggcaatttt
cttctcactggagcagctgacaggcacatttttattttggatgctagaccttcatattca
tttcaggttcttggatacatagtggtttgcggagagattctcaccttgtcatcactgagt
tctgcggatacacagcaaacaaaagttatggcacttgtttgtcctgtggatgaaaggaaa
gaagagaaaggaggaacacaattggagatgttttcattaccacttcaaatgttatcaagt
ccatctgaatatattgacgagagaggaatgtttaaggatacgatgattcagaagatttct
tatgatgtggatcagcctctgttttctgcagttatgggttacaattccagctctgtgttt
ggatacagcagcaatgaaacaatccttttaaaatacgtgatccacaaggatatatctgga
agtcctgtaactgcacttgttgcagagaaggtggtgcggggaagccaacttgggcctgga
gttctttgcttgtctcctcatctcaagtggatggcagtatctgggagagatggaattgtg
tatgtgaaggacttactgaatatggaaactatggcacaattacagtgtcattcctaccac
aatggcggtatcaactcgttagcattttccttggatggtcaaagtattgtcactacagga
acttgtgatggagcccttgtgtgcctacaatggaaatcatccggaaggagcagtagcaga
ctgggtttggctggggagtatggaaaggatcttgcactttctcttcaagctgcaatgaag
gaagaagatcaggctttaagcagaatgccagtatggacagcagatgcagattccttgggt
gtggaaaggaaaggaaaagagtacagtcagctaagtgtggacgtaactgagcaggacagc
tttccaaacacttctgctaatgatgtcacctggattaagaggaagctggaagaggctgaa
aagaaagaaacagagaaatatgcagcagagaaggaagtcattaaaactggcattaaaaaa
ctccgcaaaactatacaagcaatgatgcgagagaatgaatcattaccagacatagaaaag
ctggaccagcaggagtttaacttggatactgaggagcaggagagactgtatttagacagt
gagaaggaagtggcacgagtgcgacaagagattgagttagaaaatttgtccaaacaatac
cttcgggaagttataaagcaggaatgctgggactccatggctgtaaagggacgttctgtt
acggctttccatacaggttatgaagttatgaattatccaatgaaagaacgaacaccaaag
gaactggaaaagtttgctagagtgctaaatctcatgaaaattgaagctgttgatctcaag
gttcgaaaggaaattgttgagactcagccaaagattgggccagatgatgaagaggaagtg
gaagaggaactaatgaagtgtcaagacagctcatctttggttggcagcctgagtgatcat
tatggtggggatactagttgcttgtacagccagctaattcttcattctagggaagagaag
attaaccaaatcatactattgcaagacatcattcagaatatcaagaatgccttcaacaaa
gactttgatacggtgtgtcgtcaaaaagagcaagagatcactcgtgtaatggaaagaaat
aatcgcattcaggagatcatggttgaacttaatctgcaagagaaactcttggagcctaca
tttactgataatgagaagccagagagagcactgactgtggatgattcagaggtaaaagta
gaacggtatctaacacctgaacagaaagcaaaggcagagcatctagcaaaagtggaagag
gcaaagcgccttgctgcacaggaagacaatgctaagcagcgggctttggatgacatgatg
ggaggtgtcctagaggtaaagaaagaagatattcttcgaatggaagttccacaaccagtt
ttcctagctcgaactgaagctgaatggactgaagaggaaaagaagcaattcaaagagtat
gagaaaaaatgtaaggacctcagtgaagaaaaggagaagtacagtaaggttctggaggca
gaaatgaaaaaaatgcaattatctgtaattgaaaccacccagagttttgatgatgtcttg
gccagactgtttgaaaagaaggtgaaatcagagatgacaatttaccaggaggaactgaaa
attaataatctccttttctcgcttctcattgaagaggagataaacacaagagtagcacac
ttagcttatattctggataagaagcgcaaacaaaagaatcaaacagcagaaatagtcaag
tcttttaaatcgcaagtaatggcatttagggagtcctatgacaatctggtagctgaggat
aagcttttggaccgtggatttaagaaggagttttctgacattacatcttaccaagttgat
caactttataaactttacaaacgaagaccaagagttcagcgcttaaggactcaagcagac
agtacagctccttttggtgagcgaccaggatcagctaaagcatataaggattcaattgct
ttgctaatgcatgctatggatgaacttgacaccccagaaaatgtgcctgaaggagtggaa
ttgccagtgtggcagcgtttctgtcttgcaagacgatcaaagatagagtatgagcagcag
gtgaagatcaaagcccttgtcttagcggaaatgcaggcattcctagataagaggatagaa
gaagatgagaagatgcgtcaggatattgagaatttcatgcaggaactcaatgtgctgcgg
aatgaaaaaatgaagtttcagctagacttgactgtccagttccttcttaaacaaggccaa
gttgagctggagaacacagatttaattcccagtttcgaagacgccattcttcttcataga
agtgttattgaagatttaaacagcaccataaagggcttgggggaacagaaaattgcaagc
atggttgaaagtaaagatttccgaaaagggatttttcagctggaatgggagcataggaaa
atacgtatggaaatggaagatttggaaaagaaatctagggacattagcttgcttcacgtc
tcaaaagagttccaagtattcctcaatgagcagaattatgacaagcgcatgtctgatcag
atacaagtcctagaggaaactatcaatgctcaagaaaaacaacatggcaaaaatgtgaag
acctacaaaaaaattctgaaggacctagaaacacatataaataaaaagataatcgctaac
ctagagcttgacaaagatctgcaggaattgctggtttctttttctgaaagaaagcatatt
tatgatgtagttggtgtagaacaaagcactgagaaagctgcaaaggaaagatatatggag
attattcaacggcgcaaactagtagatcttgccaagattcaagcccaagagatccatgag
ctgagaagtgaagtagatagactgaggatgaaaacatttccagcattagtgcaaatggaa
tattaa
DBGET
integrated database retrieval system
