Xenopus laevis (African clawed frog): 108710301
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Entry
108710301 CDS
T01010
Symbol
tmc3.L
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108710301 (tmc3.L)
03037 Cilium and associated proteins [BR:
xla03037
]
108710301 (tmc3.L)
Transporters [BR:
xla02000
]
Other transporters
Pores ion channels [TC:
1
]
108710301 (tmc3.L)
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108710301 (tmc3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108710301
NCBI-ProteinID:
XP_041441516
Xenbase:
XB-GENE-17330752
UniProt:
A0A8J1MJE7
LinkDB
All DBs
Position
3L:112266009..112304081
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AA seq
1096 aa
AA seq
DB search
MATVSVSAALKPSKSVKRYKSIRRKASIYRIPPHSNSDEDDDDADGKEENNDPEMIFQSI
QMQKEIVANIRCRPWPMRQKLRSLRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFVRVSY
NFAVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTILTGAFVVIPEILAGAPF
GSTINKKIPDKELSSAQDLNTIWSLGGYLQYSVLFYGYYGRERKIGRAGYRLPLAYFLAG
MAVFAYSFITLLRKMAKNSRLSLASASDENYTFCWKIFCAWDYLIGNPEASESKTAAIAN
TIREAILEEQEKHKSKNLAVTISLRILANILVLLSLAGSIYIIYFVVDRSQKLERTKIEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVNSMSNSTNDTSTDLAPMYATKAYTMSSTVDPAWDMNRTATLALEIDLNMTKPMQST
NWTLSPVASVIPAAKNECWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLFVRYLSDCC
CWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVFKLIGLMYLRSWAVL
TCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYKPSINCGPFSGQEKIYDVI
SETIETDFPAWFNKVMSYVSSPVVALPALLLLFMLIYYLQSIARSLKFTNNQLRTKLHTE
RIEDKKKVFQMAIARLQNKDGTEKKLEPDSDIISQESSAHSSTPRKNGSVVNFESPVSKG
GRIQTISQSASRVDVPQAASLNQSPSISGMHKQRTEHFSNRPSSIKQSTVHDVDRQKNYN
PISHKKQDHNVFSEPLFRKGIKHSSPNHGAGAPSFVAKRPPTRYFIVNEQDSRMKLCTTS
KLPRHFRMEESGDIVELYPRNIRRYVVQHPRRPYSPYLSEDEEDDLHRVLMRKSNRPHSM
SDLRHPPRFYIGDRTDNQILPGRDASKMQYKSWEGGFHHEGEKTHNRKKINHKNIDLAEH
FVERHRKVKSKHKLEPYLTESDSVSNASSSDQQNSDQYIQVIHNKDKYIKNSGKLTRKKA
KTVDFSPLNDLICSNV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtgagtgtatctgctgcactgaagccttccaagtcagtgaaaaggtataaa
agtatcaggaggaaagccagcatctacagaattccacctcacagcaattcggatgaagat
gatgatgatgccgatggcaaggaagaaaataatgaccctgaaatgatctttcagagcata
cagatgcagaaagaaattgtggcaaatatcagatgcagaccctggccaatgagacaaaag
ttgcgttcgctcaggcaagctaaagaaattgtcttaaagtacgaagggagattaacgaga
acacggggttaccaagcggccggagcagagctttggagaaaatttgttcgggtttcatat
aactttgctgtcctttttattccttgggaaatgaggataaagaagatagagagtcacttt
ggatctggagttgcctcctactttatatttttgagatggctgtttgggataaacattgtt
cttacaatcttgactggggcatttgttgttattcctgagatccttgctggtgccccattt
ggaagtactatcaacaagaaaattccagataaggaactttcatcagcccaagacctcaac
accatctggtcactggggggttacctgcaatactctgtgttattttatggctattacggt
cgagaaagaaaaatagggcgagccggataccgccttccactggcatattttcttgctgga
atggctgtatttgcctacagtttcatcacactgttaagaaagatggcaaagaactctaga
ctgagcttagcaagtgcttcagatgaaaactataccttctgctggaaaatcttctgtgcc
tgggattatctcattgggaatccagaggcatcggagagcaagacagctgccatagccaac
accattcgagaagcaattttagaagaacaagagaaacataaaagcaaaaatttagcggtt
acaataagcctccggattcttgcaaatatcctcgttctcctttcactggctggaagtatt
tatattatttattttgtggtggacagatcccagaaattggagagaacaaaaatagaactg
actctctgggaaaaaaatgaggtgagtgttgttgtctctctgatcactatgattgcccct
tctgcctttgagcttgtagctgctttggagatgtatcacccaaggaccacattacgattt
cagcttgctagggtgcttgtgttataccttggtaatctctacagtttaataattgccctg
ctggacaaagtgaatagcatgagtaacagtactaatgatacctccacagacttggcccca
atgtatgccacaaaagcatacaccatgtcttctacagttgatcctgcctgggacatgaac
aggaccgcaacccttgctttagaaatagatctgaacatgacaaaacccatgcaatcaacc
aactggacattatctcctgttgcctcagtcatcccagctgcaaaaaatgagtgttgggaa
acctatgttggacaggaaatgctgaagttatcaattatcgacatgattttcacagtagcg
agtatacttctgattgatttctttcgtggactgtttgtgcgatatttgagtgattgctgt
tgctgggatctggagagcaagtttccagagtatggagaattcaaaattgctgagaatgtc
ctgcatctagtctacaatcaaggaatgatttggatgggtgcttttttttccccctgcctt
ccagcattcaacgttttcaaattaatagggttgatgtatttgagaagctgggcggtactg
acgtgcaatgttccacatcagcaagtcttcagagcttcaagatctaataatttttatttg
gctatgttgttgttcatgctgttcctgtgtatgctgccaacagtctttgctatagtaaga
tataagccatcgataaactgtgggccatttagtggacaagagaagatttatgatgttatt
tcagagaccatagagacagattttccagcttggtttaacaaagttatgagttatgtcagc
agcccagttgtggccctccccgcattgctgcttctttttatgttaatttactaccttcag
agtattgcaagatcgctgaaattcactaacaatcagctaagaacaaagctacacactgaa
agaattgaagacaagaagaaagttttccaaatggctatagcccggctgcaaaataaagat
ggaactgaaaaaaaactagaaccagacagtgatataatcagtcaggaatcgtctgcacat
tcatcaactccaagaaaaaatggcagtgtggtgaattttgaatctcctgttagcaaaggc
ggtagaatacaaacaatctcacagtcagcatctcgtgtggatgttcctcaagcagcaagt
ctaaatcagagtccttctatatctggcatgcacaaacaaaggacagagcatttttcaaac
aggccctcaagtatcaagcagagtacagtccatgatgttgatcgccaaaagaactacaat
ccaatatcacataaaaagcaagatcacaatgttttctctgaaccgctattcagaaaagga
ataaagcacagtagcccaaatcatggagctggagcaccaagttttgtggccaaaaggcct
cccacaagatattttattgttaatgaacaagattctcgcatgaagctttgtacaacttca
aagttaccaagacatttcagaatggaagagtctggagatattgtggagctatacccaaga
aatatcagaagatatgttgttcaacacccccgtcggccttactcaccctatttaagtgag
gatgaagaagatgacttgcacagagttctaatgcgtaagtctaacaggcctcattcaatg
tcagatctccgacatccacctcgattctatattggggatcgtacagacaatcagatatta
cctggcagagatgcatctaaaatgcaatataaatcatgggaaggcggcttccaccatgaa
ggagaaaaaacacacaatcgcaaaaagataaatcataaaaacatagatcttgctgagcac
tttgtggaacgccaccgcaaagtaaaatcaaaacacaagcttgaaccatacctaactgag
tccgattctgtctccaatgcatctagcagtgatcaacaaaacagcgatcagtacatacaa
gttatccataataaagacaaatatataaaaaacagtgggaagctaactcgaaagaaggca
aaaactgtggacttttccccactgaacgatctgatttgttcaaatgtctaa
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