Xenopus laevis (African clawed frog): 108710719
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Entry
108710719 CDS
T01010
Symbol
smc1b.L
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
xla04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108710719 (smc1b.L)
04114 Oocyte meiosis
108710719 (smc1b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108710719 (smc1b.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108710719 (smc1b.L)
Meiosis-specific proteins
Cohesin complex and associated proteins
108710719 (smc1b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ATP_bind_1
GCN5L1
Motif
Other DBs
NCBI-GeneID:
108710719
NCBI-ProteinID:
XP_018107354
Xenbase:
XB-GENE-17340451
UniProt:
A0A1L8GW11
A0A974HRP0
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All DBs
Position
3L:3084443..3113955
Genome browser
AA seq
1228 aa
AA seq
DB search
MGFMRLLIIHNFKSWGGCQLIGPFMRFNCVIGPNGSGKSNLMDAFSFVMGEKPANLRVKN
IRQLIHGANVGKPMSTTAKVVLVYCEENGDERQFSRIIVGESSEYRINDKPVGRSAYVLE
LEKIGIIVKARNCLVFQGEVESLAMKKPRERTQLFEQISNSLELADEYEKKKKLMLRAEE
DAQFCYNKKKNAAVQRKHAKLEKDEAEHYQVLQKKLKETKVQLQLYQLFHNERKLESVVR
SLEDKQIAVSRLKDQLAQAESAFKSEKKELGRCTRDLQQIEKEIKVQEVSLSHLRPQFIK
AKENTAHHFKKVETVKKNVMNNEKLCHQLEQDISELETEIADIQMAWRQFEKKVEEDLQR
RQGDYELEESQREQYRVLKEEANKESAVLKQQLDRLQWEQKSAQEKLEFAQTRQKEVQVN
KKHVEQQIEEHSKRIEKLEEYINNCLKFVEDQKPQEEQLGYEIETGKQRMAEVNEELNTI
VGELQNARIDFHEGSRQKRKAEVLESMKRMYPDAVFGRLFELCHPIHKKYQLAVTKVFGK
YMNAIVVSTEKVARDCVKFLKQERAEPETFLALDYLDIKQINEKLREIKGAKMMIDLVQT
VSAPLKKVIQFVCGNGLVCENVKEAKQIAFDGPERLKTVALDGTLFLKSGVISGGSSDLR
FKAKLWDEKEINELKEKRDALMNELKDLIKLKRRESDLKQLQAQLQGTQTRMKYSQSEVE
GIKKKHLANCYMEKSRLDSELINFASQLTMLREELDVHVMKIGDIQEQMNQVEDRVFRDF
CEGLGVPNIRVYEEEYVQQQQEIDKKRLEFDNQKTRLGIQLEYVQGQLEKERRNTERLKQ
NLHKEEGDKVGLKKEEEQCMKAVDKAMVQLQQFKNNFTLKKSEVAEEQKKVDEARKKLMH
INREMSQKQKEAAVIENLVEQKKIERHNLLLDCKVQDHQIILLTGSLDDITELELETETE
STQATADIYEREGNIQIDYRGLPDDLKSLNADKEISAELMKLRQEAITLENTLLKTAPNL
KALEKLHSVRDMFQETADAFEASRKKAKLCRQEFEQVKKKRYELFNRCFEHVSVAIDQIY
KKLCRNPSAQAFLSPENPEEPYLEGIGYNCLAPGKRFMSMDNLSGGEKSVAALALLFAIH
SFRPAPFFILDEVDAALDNTNIAKVTSYIKEESREQFQVVVISLKEEFYSRADALIGVCA
EQEESISSKVLTLDLTVYKEEEEGARRG
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcatgagactcctgattattcacaactttaagtcctgggggggctgtcagctc
attgggcccttcatgagattcaactgtgtcatcggccccaatggctcaggtaaatctaat
ttaatggatgcattcagctttgtaatgggtgaaaagcctgctaacctgcgagtaaaaaat
atccggcagcttatccacggagcaaacgttggcaaacccatgtccacaacagcaaaggta
gtcttggtttactgtgaggaaaatggagatgaaaggcagttttccaggattattgtagga
gaatcttcagagtatcggattaacgacaagccagtagggcggtcagcatatgtgctggag
ctagagaaaattggtatcattgtaaaagccaggaattgcctagtgtttcagggagaagtg
gaatctctagctatgaagaaaccgagagagaggacccaacttttcgaacaaataagcaac
tctttggagttagcagatgaatatgagaaaaagaagaaactgatgctgcgggcagaggag
gacgcacagttttgctataataaaaagaaaaatgcagcagttcagcggaagcatgccaag
ttagagaaggatgaggctgaacattatcaggtgctgcagaagaagctgaaagaaaccaag
gttcagctacagctatatcaacttttccacaatgagagaaaacttgagtccgtagtgagg
agtttagaagacaaacaaattgctgtcagcaggctgaaagaccagcttgctcaagctgaa
tcggctttcaagtctgaaaaaaaagaacttgggagatgtacaagagacctgcagcaaatt
gaaaaagagataaaagttcaagaagtttctttaagtcatttacgaccccagtttattaaa
gcaaaagaaaacaccgctcatcatttcaaaaaagttgaaacggttaaaaaaaatgtaatg
aacaatgagaagctgtgccaccaactggaacaagacataagtgagctggagaccgagatt
gcagatattcagatggcttggagacaatttgagaaaaaagtcgaagaggaccttcagaga
agacaaggcgattatgagctggaagaaagtcagagggaacagtacagggtattaaaggaa
gaagcaaataaagagagtgcagtgctgaagcagcagctagaccgacttcagtgggagcag
aaatctgcccaggagaagctggaatttgctcagacgagacaaaaagaagtgcaggtgaac
aagaaacatgttgagcaacagatagaagaacacagcaagcggattgaaaaattagaagag
tacataaacaattgcctcaaatttgttgaagatcaaaaacctcaggaggaacaacttgga
tatgaaattgaaactggtaagcagcgaatggcggaagtcaatgaggagctgaacactatt
gttggggagctgcagaatgcccgtattgatttccacgagggaagtagacagaagaggaaa
gccgaggtcctagaaagcatgaaaagaatgtatcctgatgctgtgtttggcagattattt
gagctctgtcacccaattcataaaaagtatcaactggctgttaccaaggtgtttggcaaa
tacatgaacgccatcgtcgtatctacagagaaggttgcaagagactgtgtcaaattcctt
aaacaggaaagggccgagcccgagacttttcttgccttggattatttggatataaagcaa
atcaatgaaaagctaagagaaataaaaggtgcaaagatgatgattgatttggtacaaact
gtgagtgcccctctgaagaaagtcatccagtttgtatgcggcaatggacttgtttgtgaa
aacgtgaaggaagcaaaacaaattgcatttgatggacctgaacgattaaaaacagttgct
ctagatggaacactttttttgaaatctggtgttatttccggtggatcgagtgatctgcga
tttaaagctaaactctgggatgagaaggagattaacgaattaaaagaaaaaagagatgcg
ctaatgaatgaattgaaagacctgattaagttgaagagaagagagagcgacttaaagcaa
cttcaggctcaactgcaaggaacccagacacgcatgaaatattcacagagtgaagtggag
ggcattaaaaagaaacatcttgctaactgctatatggaaaaatccaggttagatagtgag
ttaataaactttgcttctcagcttacaatgctgagagaggaacttgatgtccatgtaatg
aagattggagacattcaagaacaaatgaatcaggtagaggatcgagtgttcagagatttc
tgtgaggggcttggggtgccgaatattcgtgtgtacgaggaagaatatgtccaacagcag
caggagatagacaagaaaagattggaatttgataaccaaaagacacgattagggattcag
ctggaatacgttcaaggacagcttgaaaaggagaggagaaacacagaaaggttaaagcaa
aacttgcacaaagaagaaggtgataaagtcggactgaaaaaggaagaagagcaatgtatg
aaagcagtggataaggctatggttcagctacaacagttcaaaaacaatttcactctcaag
aaatccgaagttgctgaagaacagaaaaaagttgatgaagcacgaaagaagctaatgcat
ataaacagggagatgagccagaagcaaaaagaagcagcggtgatcgagaatttggtagaa
cagaaaaaaatagaaaggcacaatctactcctggattgcaaagtccaagatcatcagata
attcttctgacaggatcattggatgatattactgaattagagctagaaacagagactgaa
agcacacaagccactgcagacatctatgaaagagaggggaacattcagatagactataga
ggtcttccggatgatttgaagagtttaaatgcagacaaggagatatctgcggaacttatg
aagctgcgccaggaagccattacacttgaaaatactctactgaaaacagccccaaaccta
aaggccctggaaaagctacacagcgtcagagatatgtttcaggaaactgcagatgcattt
gaagccagcaggaagaaagccaagctgtgtagacaggaatttgagcaggtgaagaaaaag
agatatgagctttttaaccggtgttttgaacatgtgtctgtagctatcgatcagatctac
aagaagctgtgcagaaatcccagtgcccaggcatttctgagtcctgaaaatccagaagaa
ccttacctcgagggaattggttataactgtttagcccccggaaaacgttttatgtccatg
gacaatttatcagggggagaaaagtctgtggccgctttggctctactatttgccatacac
agttttcgaccagcacctttcttcattttagatgaagtagatgcagctttggacaacaca
aatatcgcaaaggtgacaagctacatcaaagaggaatcaagggagcagtttcaggtggtg
gtgatttctctaaaggaagagttttattctagagctgatgcattaatcggtgtctgtgca
gagcaagaagaatccatttcgagtaaagtgctgaccctggacctgactgtgtataaagag
gaggaagagggtgccagaaggggttag
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