Xenopus laevis (African clawed frog): 108710822
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Entry
108710822 CDS
T01010
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108710822
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
108710822
NCBI-ProteinID:
XP_018107483
UniProt:
A0A1L8GWS7
A0A974DA71
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Position
3L:26876252..26956845
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AA seq
949 aa
AA seq
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MMLKADLSSLNTLGSPLVVHTHSLMESEQNEVIEHKPWGRTNENPVLNNEDDVFKSPQES
DCSQITPWEFNDQEPVEIRNEVPRLITDRDTSDSPVPKSSSAVAAESVKTLYEFVPIANK
PEEVYKSTWKAAPSPKLKFTFQQPKKSYISRSVSLTEKELKEAQSISDNYDSPLSPTQSS
CSKGALLFHRRRQKLNALEQRQHELIEQRGNKVNQKTQHHQGKQGNQVQHEVRILNSVST
ESQRRSGQLPVGKKMEETSSDTGYAEDTENQWGDDFKEPDFPPIDNRAPSPSASEEDHQI
SMCANLKENLTVLDTNGLVNNIVEEIKSPVKSEQNGQNKQYSEVHLTLSKPVNVANRTAR
PFGCKQSSKEDEPLLDKTPLIDLPPPPTYAETLSSPPPVTRVRSPPAYSALYPTQMENLH
PVNQVVTYEEGRVTPQSKSGILESLAARRGPRKSMFTFIEKPKMAPNPDLMSMIQTADER
RSKPNKHVETHAEDEPFALGAEASSFQNNKENRAADDLGPAEKGPDWSACLKSPEVRAKP
PPVPIQGLTEATGKGADLFARRQSRMERFVVESPSPFDSARSPSPAMSLPPSWKYASNAH
TPPAYKYSAKVNQRSPKPAMPVAVTNTASESVQSQKELEISKRQPYQLQSSLFILSPTKD
PVSALPRAAPPPKPMVETFRPARQISCPTSPLVPSPTMYSPTYFNSIRSPSAVSPSPASD
APNNFGRQTPTNQVSPISPVPFSSTGVTSPRTKAVLQAPRPTFSARSVGLESQRSKEYGT
GSPIPRALQHRGSLDAWRSSPLSFLPGYEEGTRSPIHPPRSMSPSWSERSPSPFIGERES
GKQMKALIARNIINAAKRKNASSVGALSPQSPVPNNGMWSPKFGNGTSLPETPRSRHSPT
GSEISLDSEDSGTKSPGFRVYPLSPRGWYGSLKQKRDSLPNNSPFTYTP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaaagcagatttgtcatctttaaacacattgggcagtcctttggtggtacat
acccattccttaatggaatctgagcagaatgaagtgattgaacataaaccttggggaaga
accaatgaaaatccagttcttaacaatgaggatgatgtttttaaaagtcctcaggaaagt
gactgtagccaaataaccccttgggaattcaatgaccaggaaccagtggaaattagaaat
gaggtgcctcgcttgatcactgatagagacacttcagattcacctgtgcctaaatcctcc
agtgcagttgcagctgaatcggtcaaaacattgtatgagtttgtccccattgctaacaag
cctgaagaagtgtacaagtcaacctggaaggccgcgccatcccccaagctaaaattcacc
tttcaacagccgaaaaagtcatatatttcacgaagtgtcagcctcacagaaaaggagttg
aaggaagcacagtccattagtgataattatgattccccactgagccccacacagagtagc
tgttcaaagggagcactactgtttcatcgccgacgacagaaactaaatgcccttgaacaa
aggcaacatgaacttatagaacaaagagggaacaaggttaatcaaaagactcaacatcat
caaggaaaacaaggtaaccaagtccaacatgaagtgagaattttaaactcggtgtcaacg
gaaagtcagcgtaggtctggtcaacttccagttggaaagaaaatggaagagacatcatct
gacacagggtatgcagaagatacagaaaatcagtggggagatgacttcaaagaaccagat
ttcccaccaatagataacagagccccctcaccgagtgcttcagaagaagaccatcaaatt
tcaatgtgtgcaaatctgaaggaaaacttgacagtgttagatactaatggtttggttaat
aacattgttgaagagattaaatcccctgtcaaaagtgagcagaatggtcaaaataaacag
tactctgaagtacacctgactctatccaaacctgtcaatgtggctaacagaaccgctagg
ccttttggatgtaagcagtcttcaaaggaggatgagcctttattagataaaactcctctt
atagatcttcctccaccaccaacttatgctgaaacattgtcaagtccacctccagtcaca
cgtgttcgatcaccaccagcatattctgctttatatccaacacagatggaaaatctacac
cctgtgaatcaggttgtaacctatgaagaaggcagggtgactccccagtcaaagtctgga
atcttagagtcacttgcagctcgtcgaggaccgaggaaatcaatgttcacattcattgaa
aagccaaagatggcaccaaatcctgaccttatgtctatgatacagacagcagatgaacga
cgctcaaagcccaataagcatgtagaaacacatgctgaggatgaaccctttgcacttggg
gcagaagcttctagtttccaaaacaataaagagaacagagcagcagatgatttgggacct
gctgaaaaagggcctgattggtcagcgtgtctcaagtctccagaggtcagagcaaagccg
cctcctgtaccaatccaaggtctgacagaagctacagggaaaggtgcagatttatttgct
aggaggcaatcccggatggaaaggtttgttgttgaatccccatcaccttttgactctgcc
aggtcaccttctcctgccatgtccctgccaccttcctggaaatatgcctcaaatgctcat
acacctcccgcatacaaatattcagccaaagtcaatcaaagatcaccaaaacctgcaatg
ccagttgcagtaactaatactgcctcagagagtgtacagtcacagaaagaactagagatt
tccaaacggcagccgtaccaacttcaatcttcactgtttattctctctccaaccaaagac
cctgtgagtgctcttccaagagcagccccacctcccaaacccatggtagagacttttcgt
ccagcaaggcaaatatcctgcccaacttctccactagttccttcccctacaatgtattca
ccaacttactttaattcaatccgatccccttctgctgtgtctccttctccagccagtgat
gcccccaataattttggaagacagacaccaaccaatcaggtttctccaatatctccagtt
cctttctcaagcaccggagtaacatctccacgaaccaaagctgtgttacaagcacctcgt
ccaacattctctgccagaagtgtcggtctggaatctcagagatcaaaagaatatggaact
ggatctcctattccaagagctctgcaacatcgaggatcattggatgcatggagaagctct
cctctgtcattcctaccaggatatgaagaaggtaccaggagtccaatccaccctcctcgt
tccatgtccccttcatggagtgaacgttctccctctccattcataggggagagggagtct
gggaagcaaatgaaagctcttattgctcgtaacatcatcaatgcagccaagaggaagaat
gcatcctctgtgggtgctttaagcccccagtctcctgttccaaacaatggaatgtggagt
ccaaaatttggcaatggcacctctcttcctgaaacacctagatctagacactctcccact
ggctctgaaatctccctggattcagaagattctgggaccaaatcaccaggattccgggtc
tatccactgagtccgaggggatggtatggaagtttgaaacaaaagagggatagcttgccc
aacaattcaccattcacgtatacaccatag
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