Xenopus laevis (African clawed frog): 108710862
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Entry
108710862 CDS
T01010
Symbol
pcdha13.L
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108710862 (pcdha13.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Protocadherins
108710862 (pcdha13.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
CD59
Motif
Other DBs
NCBI-GeneID:
108710862
NCBI-ProteinID:
XP_018107540
Xenbase:
XB-GENE-6487693
UniProt:
A0A1L8GX05
A0A974DD36
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All DBs
Position
3L:33010310..33064635
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AA seq
958 aa
AA seq
DB search
MLVCGARGRRQHLGQLLVLLLICCPAWASSQIRYSVPEELEHGAFVGNIAEDLGLDISKL
SPRRFRIVSGSSKQHLEVNLENGILFVNEKIDREEVCEQQPVCSLHLQVVMENPLELYRV
EVEVLDINDNAPSFPWHDYVLEVTESAAPGARFPLESAQDPDVGSNSLRTYRLSPNGFFS
LEVQSRSDGSKFAELVLERPLDREQQKTHRVLLTAMDGGLPERSGSALVTVSVLDANDNV
PAFDQTFYRVSLYENAPKGTLLIQLNASDPDEGTNGEIEYSFSGHAPQKVRDLFAVEPRR
GQVRVKGLLDYEKSNVYELYVQAKDRGPSAVAVHCRLLVNLLDVNDNAPDIILTSVSTPV
MEDASPGTVIAVISVMDRDSGDNGEVNCEIPQNVPFQLHSSYKNYYTLVTTEPLDRERVP
EYNITISARDFGSPPLTSNKVINVQVTDINDNSPTFVQPSYTVYVLENNPPGASICSVTA
LDPDCQHNAYLSYSILEGQIQGMPVATYVSINSDSGNVYALRSFDYERIKNFQIRVQVQD
AGFPPLSSNVTINVFILDQNDNAPVIVSPLPKNGTVATDIIPRVADPGYLIGKISAMDAD
SGQNSRLSYQIIQATDSTLFSIALYTGELRTIRLITERDATKHRLLIQIRDNGQPALSTS
VSIVLTVVDNMPESHSEFNDVPLNSDPATSSLTLYLIVSLGSVSFTFLVAIIVLTVIKCH
KDRLSLQDYKCSLPTCCCMTSDSSGGVFKNSNINLQISSGNKVQTNCMESAGSAPPNYCY
KVCLTPESAKSDFMFLKPYNSSTQNNEKVPEKVAPGKTGHAVNKAVNEIKFPNTDWSPQK
EQKPGLKSSQSLEDLGTRKGSKKDHDRLRTLVSPVTDIKKKPTTSNGVWSPKYGLQFQQH
GPSLDYQHNVYIPGTPTLLANKQGLFEEKNSFSTFGKKRRMSCYGEVHDDMIINNDLK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgtgtggggctcggggcagaaggcagcaccttggacagctcctcgtgcttctc
ctcatttgctgcccggcttgggcttccagtcagatccgctactcggtgccggaggaactg
gaacacggggcgttcgtggggaacatcgcggaggacttgggtctggacatctccaaactg
tcccccaggcgcttccgaatcgtgtcgggcagcagcaagcagcacctggaggtcaacctg
gagaatgggatcctgttcgtcaacgagaagatcgaccgggaagaagtttgcgagcagcag
cccgtgtgctctctgcacctgcaggtggtgatggagaaccctctggagctgtaccgagtg
gaggtggaggtgttggatatcaacgacaacgctccgagcttcccgtggcacgactatgtg
ctggaggtgaccgagtcggcggcgcccggggctcgtttccctctggagagcgctcaggac
ccagacgtcggcagcaactctctgaggacctacagactgagtcctaacggcttcttctcg
ctggaagtccagagccggagcgacggcagcaaattcgccgaacttgtcctggagagacct
ctggaccgggagcagcagaaaacgcaccgggtgctcctcaccgccatggacgggggtctg
cccgagaggtcggggagtgctctggtgacggtcagcgtgctggacgccaatgataacgtg
ccggcttttgatcagactttctaccgggtgagtctgtatgaaaacgcgccgaagggaacg
ctgctgatccagctgaacgccagcgacccggacgagggaaccaacggggagatcgaatac
tcgttcagcggacacgcgccccagaaggtcagggatcttttcgcggtggagccgcgccgg
gggcaggtgagagtgaaggggcttctggattacgagaagtccaacgtgtacgagctttat
gttcaagccaaggaccggggtccctccgcggtggccgtgcactgcaggctcttagtcaat
ctgctggatgtcaatgacaatgccccggacattattctcacctcggtgtccactccggtc
atggaagacgcttccccggggacagtcatcgccgttatcagcgtcatggacagggactcc
ggggacaacggggaggtcaactgcgagatcccccagaacgtcccgtttcagctgcactcg
tcctacaagaactactacaccctggtgaccaccgagccgctggaccgggagcgggtgccc
gagtataacatcacgatcagcgcccgggacttcggctcccccccgctcacgagcaacaaa
gtaatcaatgtgcaggtgaccgacatcaacgataacagcccgactttcgtacagccctcg
tacaccgtgtatgtgctcgagaataaccccccgggcgcctccatctgctccgtcaccgcc
ttggaccccgactgccaacacaacgcctatttgtcctattccattctggagggtcagatc
caggggatgccggtggccacttatgtctccatcaactcggacagcggcaacgtctatgcc
ctgcgctccttcgactacgagcggatcaaaaacttccagatcagggttcaagtccaagac
gcgggctttccgcctctgagcagcaatgtgaccatcaatgtgtttattctggatcagaat
gacaacgcccccgttattgtctcccccctgcccaagaacggcaccgtggccacagatatc
atcccccgagtcgccgaccccggttacctgattggcaaaatctcagccatggacgctgac
tctggccagaactcgcgcctgtcttatcagatcatccaagccaccgactcgacgctcttt
agcatcgcattgtacacgggggagctgaggactatccgccttataacagagcgagatgcc
accaaacaccggctgctcatccagattagagacaatgggcaacctgccctctccacttca
gtgtccatagtcctcactgtggtggacaacatgcccgagagccactctgaatttaatgat
gtgcctttaaactcagaccctgccacttcatccctcactctttatttaatagtgtccctt
ggctcggtctccttcactttcctggtggccatcattgtcctcactgtcattaaatgtcac
aaagacaggctctccctgcaggattacaagtgctccctccctacctgttgctgcatgaca
tctgattcctctggaggggtctttaaaaactcaaacatcaacctccagatctcctctggg
aataaagtgcagaccaactgcatggagtcggcggggagcgcgcctccaaattattgttac
aaagtgtgtctgaccccggaatctgctaagagcgacttcatgttcctaaaaccttacaac
tccagcacccaaaacaatgaaaaggttccagaaaaggtggcccctgggaagactgggcat
gcagttaacaaagcagttaacgagataaaatttccaaataccgactggtcccctcaaaag
gaacagaagccagggctgaaaagttctcagagtcttgaagaccttggaactcgaaaaggt
tcaaaaaaagaccacgacagactccgtacactagtttcccctgtcactgatataaagaag
aagcccacaacatcaaatggagtgtggagccctaagtatggcctacagttccaacagcat
ggaccaagcttggactatcagcataatgtttatattcctgggacgccgacattactggcc
aacaaacaaggcttgtttgaggagaaaaacagtttttccacttttggaaagaagagaaga
atgtcctgttatggagaagtccatgatgatatgataatcaacaatgatttgaaatga
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