Xenopus laevis (African clawed frog): 108710927
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Entry
108710927 CDS
T01010
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108710927
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108710927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
CUE
Motif
Other DBs
NCBI-GeneID:
108710927
NCBI-ProteinID:
XP_018107625
UniProt:
A0A8J0UQA8
LinkDB
All DBs
Position
1L:complement(81619603..81687243)
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AA seq
1012 aa
AA seq
DB search
MSSCEISICAGWMSETMSAFNLERFRFDKTKKIDNAFDGNGSSSRPSTPVSLEDNVTSIP
ETPEAKRASNPSLFKKDKGVSFLDSDSENEDHQSNQKSHTGEENGTSDSVTDDSADEYLA
VKRAPGSAFKRAPASTQEKDGSKSKKLHRLKEIFPKQNNKELLQLIESTSTLDGAVAAGV
VLFSKEGSSRKRKLDEDSSPVHDGINGKTTKKTKIDAASDEDSSLSEDDWEKQEASVKKL
QRHFPDLDKEELREVLQEHDWSFHEALEALKLFAEDETDTLKNASKKEVSNGKELSRKND
HKSSAKAKANQLSNKTMAQNGVKKKAKGKKNSESAKRDTRDLESEESASEAGSCLDEDYS
SGDEKLEEEYKTKILSFLQDASLDELYLIPHCSHKKAQKITELRPFSSWESLFEKLSRSN
GLSQDLIWDCQTLIKEREVVMKLMNKCEEISRTLTKQVTKLTEDGECGWNIEQPSIMSEN
LVLKPYQKIGLNWLALLHKHNVNMILADEMGLGKTVQAIAFLAYLYITGDTGPHLVVVPA
STMDNWIREFNQWCPSMNILLYYGSQEERRHLRYDILNKVVEFNVIVTTYNCAISSAEDR
SLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNAKSRLLLTGTPVQNNLLELMSLLNFV
MPHMFSSSTSEIKRLFSSKAKSTDEQSTFEKERIAHAKQIMKPFILRRVKNEVLKQLPPK
QDQIKFCPMSKKQDQLYSGLLNKLKKSIDATEKNSELCNVMMHLRKMANHPLLHRQYYTA
EKLRTMSKLMLKEPTHCEANPDLIFEDMEVMTDFELHRLCGEFTTLSQYKLEKELILDSG
KFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLKHHQHRYIRLDGKTQISERIHLID
EFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKV
IKLIGKGTIEESMLKISQQKLRLEQDMTTVDTGDEGTIPLDMATLLKTSLGL
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtgtgagatcagtatttgtgctggttggatgtctgaaactatgtcggcattt
aacctggaacgtttccgttttgataagaccaagaaaatagataatgcctttgatggaaat
ggttcttcaagtcggccaagcacaccagtttctctggaggacaatgtgaccagcatccct
gagacccctgaagctaagagggcaagcaacccttcactttttaaaaaagataaaggtgtc
agttttctggattcagactcagaaaatgaagatcatcagagcaaccagaaatcacataca
ggggaggagaatggcacatccgattcggtaacagatgattctgcggatgaatatcttgct
gttaaaagggcaccaggctctgcatttaaaagggcaccagcctctacacaggaaaaggat
ggatccaaatctaagaaactccataggcttaaggaaattttccctaaacagaacaataaa
gagctattgcaactaattgaatcaacaagcactcttgacggagcagtagctgctggagta
gttttgtttagtaaagaaggttcatcccgaaagaggaaattagatgaagacagctctccg
gttcatgatggcatcaatggaaaaaccacaaagaaaacaaaaattgatgcagcatcagat
gaagatagttctctatctgaagatgactgggaaaagcaagaagcaagtgtaaagaagttg
caacggcactttcctgatttggataaagaggagcttagagaagttcttcaagagcatgac
tggtccttccatgaagccttagaagctttaaaactttttgcagaagatgagacagatact
ttgaaaaatgcttccaaaaaggaggtttcaaacggaaaagagctctccagaaaaaatgac
cataaaagcagtgccaaagcaaaggcaaaccagctttctaataaaacaatggctcaaaat
ggtgtaaagaaaaaagcaaaagggaaaaaaaattctgaaagtgccaaaagggacacgagg
gacctagagagcgaggaatctgcctctgaggctggaagttgcctggatgaggactatagc
agtggtgatgagaaactggaagaggaatacaaaacaaaaatccttagcttcttgcaggat
gcttcactagatgaactgtatttgatacctcattgttctcataaaaaagctcagaagatc
actgagctccggcccttcagctcttgggaatctctgtttgaaaaactgagcaggtctaat
ggcctttcacaagatctgatatgggactgtcaaacattgataaaggaaagagaggtggtt
atgaagcttatgaataaatgtgaagagatttcacggacactgacgaaacaggtgacaaag
cttacagaagatggggaatgtggatggaatattgagcagccttcaataatgtcagaaaac
ttggtccttaaaccatatcagaagattggtttgaattggcttgcattgctgcacaagcac
aacgttaatatgattcttgcagatgaaatgggtctgggaaagactgttcaagccatagca
tttcttgcatacctttacatcactggtgatacaggtcctcatcttgtggttgtacctgct
tcaacaatggataactggattagagagttcaaccagtggtgtcctagtatgaatatttta
ctttattatggctctcaagaggaacgaaggcatttacgctatgacatactaaacaaagtt
gttgaattcaatgtaatagtgacaacatacaattgtgcaatcagcagtgctgaagatcgc
agcttgtttcggcgcctcaagcttaattttgctgttttcgatgaaggccacatgttgaag
aacatgagtgcaattcgctaccagcaccttatgactttaaatgccaagagtcgcttacta
ctgactggaactccagtgcagaacaacctgttagaactcatgtctctcctaaactttgta
atgcctcacatgttcagcagcagcaccagtgagatcaagagattgttttcttctaaagcg
aaatccactgatgaacaaagtacatttgaaaaggagagaattgctcatgccaagcaaatt
atgaagccatttatactgaggagagtgaaaaatgaggttcttaaacagctaccgcctaaa
caagaccaaattaagttttgcccaatgtccaaaaaacaggaccagctatacagtggccta
ttgaataaattaaagaagtcaattgatgcaacagagaagaattcagaactatgcaatgta
atgatgcacttgagaaaaatggctaaccaccctttgctacacaggcagtattatacagca
gagaaactaagaaccatgtctaaactaatgctcaaggaacctactcactgtgaagcaaac
ccagatctcatctttgaagatatggaagtaatgacagactttgagctacatagactgtgt
ggggaatttaccacactttcacagtataaattagaaaaggagctgatactggattctggg
aaatttaatatactggaaaagcttttatctgatattaagaaaaagggagacagagttgta
ttatttagtcaatttaccatgatgttggatattattgaagttttcctgaagcatcaccag
catagatatatcaggctggacgggaaaacgcaaatatcggaaaggatacatcttatagat
gagtttaacactgacatggatatatttatattccttctgtcaaccaaagcggggggactt
gggatcaatctgacgtccgcaaacatcgtcattctccatgatatagactgcaacccttac
aatgacaagcaggcagaggatcgatgccacagagtcggccagaccaaggaagtaaaagtg
atcaagttgattggcaaaggaaccattgaagagtcaatgctgaaaatcagtcagcagaaa
ttaaggcttgaacaagatatgacaactgtagacacaggagatgaagggaccatccctctg
gacatggctactttactgaaaacatccctaggtctttaa
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