Xenopus laevis (African clawed frog): 108710943
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Entry
108710943 CDS
T01010
Symbol
sh3tc2.L
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X5
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108710943 (sh3tc2.L)
Membrane trafficking [BR:
xla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108710943 (sh3tc2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
SH3_2
TPR_1
SH3_1
TPR_MalT
DUF7627
Motif
Other DBs
NCBI-GeneID:
108710943
NCBI-ProteinID:
XP_018107646
Xenbase:
XB-GENE-6488769
UniProt:
A0A1L8GXM4
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All DBs
Position
3L:48293458..48373237
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AA seq
1278 aa
AA seq
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MASDDAEDSELVCEAEESPVGKESVSLAVGEGFITEIPLSFSILQRSTQGPNVRLQEAAR
KMLWALENDNKDISMLFKELSARLVSIQASQDLFLITFKTVEEIWKFTTYLSLGFVACSL
EHLLFDERYWLNSALVEDTEIHVSINQDQLARLYLGLLLQEGNFYAKSVVSSGGGIEFDE
GNSEFLEVRLNDVVHIKDVGDESAWEGQSLSTGERGLVPIVAVEPLSHPFYQWFLKTYPV
SCNIMDPDCLLGTSQPIGEGFCIATDNHVATGWDELSYITGDTIEVVGFFIPGLKWFVGR
CPSNGVMGFVRTNNVDTSCLKALDKDLLFLSEEERSFLNVLDDDTQKGCMDLLSSLCQTD
ISSVYRLDGMEPMGIYMKASPVINEDLGEIQITESWEECEAVSGSSKGSASEKSSPDSEW
KGEVEGFHIQAQDDIDDPKFFVDLNTGEVDDSEVFEPVLTFLNKEGYQVYFQPLYDLPMS
FLSTTFYGFSEEEDLVFYLETSRNWAKKSQMTWSHIRCCFLLGRICAKRMKLSQARVYFE
EALSATRQGFLDLHLLRALYGNLAAIYLKQNMKPKQDLLVEKAASLLACLPHHNFSSEIE
FEVLKYILRKSIIVNNVSSEARTCFLIFRLLQQLGRYDEALPFVERLQFLLIASCSQTLN
PTLGVMPILSYFYDKKYLPRVALASSKLCKTVGIKIMQSAMWRAGIVIQNIYKITEGSLK
NNYIPAQAAPYLKHALSCSYESGDVKAQRTLCLILSKLYLQYKLFSGAICYSKRAAELGR
WTSDEEAFESSVFLGWMYVLDGHYEQACKILMLLLESMQETDSTTQCGVVHNLLANAKKM
DNNVIEASRGYTQALKMATETGNRRNQAIVMANFGRLSLSCQAVVMAESYFLHSVQLYIE
VQGSDEAERELVQVLHWLGQIFTQQRILEKGILCYELALMFALKSNNLKSQLSIIEELCN
FYSKVCPVTATHIIYCEHWMYLVQLLKDKRKEGELLSTLSQLYQTLNTAKSLRKALDYTK
QSLRISIDLGQRDQAAENWLQAGRLYYMMGEQELVEIYLYAAIQASQKAQDIAATLRLYE
AAGDVFFHGVQRRERAMYFYKEGALPLAKKVQDTEAQLRLFHKLTQLLVSQGHYKKSVEY
ATMAVRLSASVESPLDELVAFHRLAGVYYSQRIYEIAEYCYLKALSLCPSPMQHDAETGY
YLKIYWRLGNIALLKRKDAEDAATYFLLALAAAIGIENEEFQLVLSNKLMDIYGKFLLNE
EQADNFRKLLVQLSMKST
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagatgacgcggaggactcagaacttgtttgtgaggctgaggagagcccagtg
gggaaggagtctgtctccctggcagtgggagaaggatttatcactgaaatccccttgtct
ttctccatcctgcaacgttcaacccagggtccaaatgtccgtttacaggaggcagcaagg
aagatgctttgggccctagaaaatgacaacaaggatatttcaatgctatttaaggagctg
tctgctcgactggtttctatccaagccagccaggaccttttccttattactttcaaaact
gtggaagagatctggaaatttacaacatatctgtcattaggctttgtggcttgcagcctg
gaacacctgctctttgatgagagatactggctaaactcggctttagtggaagatactgaa
attcatgtctctataaatcaggatcagctggctagactttatctgggcctactcttacaa
gaaggaaacttctatgccaaatcagtagtcagtagtggaggcggtattgagtttgatgaa
gggaattcagaatttctagaagtccgtctcaatgatgtggttcatataaaagatgttgga
gatgagtcagcatgggaaggccagtccttaagcactggagaacggggtttggtgcccatt
gtagctgtggagccattgtcacatcccttctaccaatggtttctgaagacatacccagtg
tcctgtaacatcatggatcccgactgcttgcttggaacatctcaaccaatcggagaaggt
ttttgcatcgccacagacaaccacgtggccacaggatgggatgagctcagctacatcact
ggagacaccattgaagttgtaggcttttttataccaggactgaagtggtttgtgggcaga
tgcccttctaatggagtcatgggatttgtcagaactaataatgtggacacaagctgtttg
aaagccttagataaggacttgctctttctaagtgaagaggagagatcgttccttaatgtc
ctcgatgatgacacccagaaaggctgcatggatctacttagcagcctctgccagacagat
atcagctcagtgtacagactcgatggtatggaacctatgggcatatatatgaaagcatcc
cctgttataaatgaggacttgggtgaaattcagatcactgagagctgggaggagtgtgaa
gctgtaagtggctcatccaaaggcagtgcatctgagaaatctagtccagactcagaatgg
aaaggtgaagtggagggattccatattcaagcacaggacgacattgatgacccaaagttc
tttgttgatttaaacactggggaggtggatgattctgaagtctttgaacctgtcttaaca
ttcctcaacaaagagggttaccaagtctactttcagcctttatatgacttgcctatgtca
ttcctaagcaccacattttatggattttctgaggaagaagatttggttttctaccttgaa
acgtctcgaaactgggctaagaaaagtcagatgacttggtctcacatacgttgttgcttt
cttctggggcggatttgtgccaaaagaatgaagctatcccaggccagggtttattttgaa
gaagcattaagtgctacaaggcagggatttcttgatttacacctgttgagagctttgtat
ggcaacctcgcagctatttacttgaagcagaacatgaaacctaaacaggacttattggta
gagaaggcagcaagtctcctagcatgcttgccccatcacaatttcagctcagaaatagag
tttgaggtgttaaaatacattttaagaaaatccataattgttaacaatgtctcatctgaa
gccaggacgtgttttctcattttcaggctgctccagcaattgggaagatatgatgaggca
ctgccatttgtggaacgactgcagtttcttctcattgcttcatgttctcaaacattaaac
cccacattaggtgtgatgccaattttaagttacttctatgacaaaaaatatcttccacgc
gttgctttggcatcttccaaactgtgcaagactgttggcataaaaataatgcaatcggca
atgtggagagctgggattgttatccaaaatatttataagatcacagaggggtctttgaaa
aacaactacattcctgcacaagctgctccttacttgaaacatgcactttcctgctcttat
gagagtggagatgtgaaagctcaaagaacattatgccttattttatctaaattatacctc
caatataaactattttcaggtgccatttgttactctaaaagggctgctgaattaggcaga
tggaccagtgatgaggaagcatttgaatcatctgtctttttgggatggatgtatgtacta
gacggccattatgaacaagcttgtaagattctgatgttgctgctagaatccatgcaggaa
acagacagtaccacccagtgcggagttgtccataaccttctcgccaatgccaaaaagatg
gataataatgtgattgaggcatcgagagggtacacccaagctctaaaaatggccacagaa
acagggaacaggcgaaaccaagcaatagtgatggctaattttgggagattgtctctttcc
tgtcaagctgtggttatggcggaaagttactttctccactctgtccagttgtatatagaa
gtgcagggcagtgatgaggctgagcgggagctggtacaggttttgcattggcttggacag
attttcactcaacaaagaatcctcgagaaaggcatactatgttatgagctggccctaatg
tttgccttgaagtctaacaaccttaaaagccagctcagtatcattgaggaattgtgcaat
ttctacagcaaagtgtgccctgtcactgcaacccatataatctactgtgaacactggatg
tacctagtgcagctactgaaggacaagagaaaggaaggtgaattgctgagcactctgagt
cagctataccagaccctgaacaccgccaagtctcttcgaaaagccctggattacaccaag
caaagtctaaggatttccattgatctgggtcaacgtgaccaagctgctgaaaattggctt
caagcaggaagattgtattatatgatgggagagcaagagctagtggagatttatttatac
gctgctatacaggcatcccaaaaggcacaggacattgccgcaacactgaggttatatgaa
gcagctggagatgttttctttcatggagttcagaggcgagaaagagcaatgtatttttat
aaggaaggtgctctcccgctagccaagaaagtccaggacactgaagcacaacttcgtctt
tttcataagctcacacaactacttgtaagccaaggccactataagaagtcagtggaatat
gccaccatggcagtccgactcagtgccagtgttgagagtccactagatgagctggttgct
ttccatcgcttggccggagtgtactattcccaacggatttatgagattgctgagtactgt
tacctcaaagccctgtcattatgcccatctcccatgcagcatgatgcagagactggctat
tacctaaagatttactggcggctgggcaatatcgctctgcttaaaagaaaggatgcagaa
gatgctgctacatacttcctgctggccctggcagctgccattggcattgagaatgaagag
tttcaactggtgctaagtaacaaacttatggacatatatggaaaattcctgctgaatgag
gagcaggcggacaacttcaggaagctcctagttcagcttagcatgaagtccacctga
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