Xenopus laevis (African clawed frog): 108711037
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Entry
108711037 CDS
T01010
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108711037
Cilium and associated proteins [BR:
xla03037
]
Motile cilia and associated proteins
Sperm associated proteins
108711037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
NNH5
Borrelia_REV
Motif
Other DBs
NCBI-GeneID:
108711037
NCBI-ProteinID:
XP_018107845
UniProt:
A0A1L8GY67
A0A974DBB1
LinkDB
All DBs
Position
3L:57874652..58016315
Genome browser
AA seq
3147 aa
AA seq
DB search
MEPLPATFYGQIDRKNPVIATFENEISHLLGFIRKVRRAPCGSPGSMDYRKGSSTLFRIW
VKYKPRLPTWYYQEKLLNVGDSLVQIKQYKLALFQCYGRYLEQFCSEGIDEITDVKQFKS
TFFPDGTDDKNASLTFHALQGRCICLYQLVKMSDLNLQNPESLKKCVNILSFLQLIMQVV
LPQEQLCWLTFNGSIHIYTICRHLMVLGYSSKALEYLLWASVCMESSVPLLSVHYLTWRA
TLYTAVCQCYYDCQAGVHGEVFARRALSKINELSQLENISNSSGSEEAKKVFTEATAKMA
VMIFKRAVFESRRKPKGMLRPKQKSNLKDVEKLPWPRTSTERLLVEMFDNGAVQFLAIIE
ALSDSNRRVLQGGPPVPDEPEIHDVIAELFFAGSDIVAGGGNKGQRGSCGQTELLKWLEQ
ASLLDLALEEKDAVSVEAVVKFAKLAFSYEQWDAFDTIVMQVYTFLQAQDNTKWKEEKMN
LNILIAAEPLLSGKKQKRHLQSEERSMKILKKSISLAIVHLIDLHGDSTQDRAQDDHMTL
AETVFVSVCSSLQGIQPDREIIVDVILFLWQKCKFALQRIQAADGPKFIHKCEVNSKWIY
ILCLIYEVMQLCSIIDTDSVIMAEAALKLAGIAEGIADCIIKYVKKPEKLTEKVNDESAT
QGPYAAKLIQLEKNPVTQLTFAYETAEKAIKGMSLARSRGCTPDELSVIDHYCVTLGVKR
QHLKNMAVEQNSPSKSLANNGMVMDLQLELIMTQHRVSVKLLNLLQGRHEQIKSLKSPPT
SQGNTDPSVLPTECNIIGKIKKNKLSKAIFLMQKAVLFNKGLGSISPSQLLEDSEKLIRK
LEAEENAVYLSCVKQDRSFGSEKKSVPPPPLLISRTEDSMVFKPAPFKSDIKVSWYCLFG
RCVTGPDLKVRLKDQHLYGTGEEIPAGSGNLLEVKGLEANEKYIFAVAAYSSEGVLIGDA
VGESTKPILAFPALSVPMTWAYLAQSAYHVGNYNMAKKAVSVLWNYFVLQPVSPQTHMAV
VFARDQDYVSQKRLCLDVISKSSPVMLQHFLTSIFLLTDINIKEGGLFCDCLCNNGVLKK
WQICRIAECERMLVALDVSTWLNDASYALQAVVQCYGLIAPIIYHRIPSVPVVQILIKCL
AVIQEIPSSTWQRKQAAVTEGVLHMIACIVYYVAKVLRTWEEYELAIAIIEDGKKILDIS
ENTSIFYLSSQPKLNYLETEKAKDIVDKEKVQLMRKCQKKKPSIAEKVSEQLSALELHLQ
KLTKPSDGADLTGHEDPMLLHAVVACWPTVAAYKEVMKFKKRSRFLEFFVQLLQRVVYEE
KFQRALDWANTVLEHLKRRNENVLGISRTEAAEDAIPSDSFKRYTAALVEYHKDKEHPAL
KKERKQIKPEKHKESFPTQMRKNTKLSDSHRNLGEDLEKQAFATLRKLLLPVACRYIKHK
KLNTFCTEEMPWRSQLNLLLAYIHFNMFRSKLDKLCSNESGWAHNSTRVLDPDLFALHHA
GIVVMTTETTVLDEQIGSPGHLHPSLKLDLTSGTKLSDSNDFSEPSTKKTETDTPRTQMT
NDTEDSSHTVTEQAQPNMLSVILFDHLGKIYIHLKRAVVLSHRAQHWTLFQNTCRVLWNL
TLELQLLIKQNEVTNGRFALNSVLNNEIWLPFYLAADSILDMLVILQSTGAVKVVDCDEA
FSVPSCMGGPAYEEGGSNLTFEYPLDDVNVIDMRWMHDLVLKAIELLYRVQRWEALVHLA
VQFNLLTHERYTEQVTPLLVHAQRMLIARIQEINSKYVVGPEEKINCREYIGRDVHVAVS
STKIKNPGSKVNWKGQTVLPDGREVKVLASVPLDVMDTLACFRETLQKSKYSSRALRHSR
KLLALLLAHDQGLNARERVSSPYSAFGKVSFSAGALKAHQPVPPDLSEEEFHSVHSIESK
ALPPSYLSFVITSYDKTVEILHSDNQQGLKAQALHELGNLHMFAGNKRAAFKCWCRALDE
TLNMSDTLNSWQELNSSPDSISSGRSKDYSEKFLSRAGIWGCLQAAVITAKMSRYILTSN
VRKRTECCILSALLFKALLLASMPHPTENRDYALYEIGEGCEISELIPGIDLFSDRYRAD
VAIVVGSLSFVISELHAASQNLIVLPLFTLYQYFVSMICRDPVRSVKGRLLKINVLTDLH
LFTEAFHEICLLNHGKRIPSRTIQGFKQNAKQLTFPTFSSSMTMLSSENLQAIQEVLNRK
PSSYLQSVCDQDTVNKFVLAKMHFIVKLSTTINAIPKAENKPSNSVAEDSVSSQELETDI
PGNKSKDVEESVSLSLKQDLTPSELKGILLNEAEERLNMILQNLQEKYECQLSQCSAVDL
KMAIEAKLQLSEIVQQRHETALSVALAYSTMLLLHKANIFITKPPKDGKHASSKGKQHTA
LNLKDDQASTIVEPELHSEAEAIHLLDIRLWLRCRLSLVNSLVAQLRGIALKEEDFLDSS
AIITEGIMEAESLSDSETQAHFMLQGAYLHIQEGHSKKAVQIMLENIITLLDEKQFMSPA
ACLTFAQSLLLSADLIEMENGKDQQLFWEKQLNFLTLAQEMIIKQMISLGEAIEYRVTDP
MTISPVQPLKNIYLPHINLLAKIKLRIGHILSIKASTSSGMPSLNMYTTALELCRVSSFR
EYDLEAELHFQKGKEEHKMFELGDLEKSSAIQSFSEAIHISQNYDQNFSLIRKSYMEIAL
LYLHLANMDANRSDPKDSPTVEAKIASAKGKVDKLMEEDINEKMLSLSELYSLLAWTAIR
AATQVGNAMLAFKQLIGVSSVSAQSLNTTLLGQIPKFACMDLLASYKNFLSGEGQGMDKS
AQKDGGFTDNLPKETLSWVHLIRYHNHLLRLISMINMSGSSTSLEENCPSADTLLSSVFQ
HGVTVRFAAMHQFLKKNLESYAICCVNDFPQEILIGTKKSLIDLCVLRKTISESEKLQPA
TSSLKIPATVFIDTKQDVLNEQMATNSLGEELCIQWYLPSLEQLGKRKFMVLLLYAYNKK
GLTVKDPKKCDPSSLLCGHVWLPLSHVCSLQEKLHALRQKAESTLQPERAASVTDSGAKM
KQLTQSAKSKTNLKTISVPEEIQKNVKQLCFEIQQLLCPVQDPKAFTETPFDITLPSLIR
LERMFDPTHGCMLMKGCLLDWIVSQLT
NT seq
9444 nt
NT seq
+upstream
nt +downstream
nt
atggagccattaccagccaccttctacggacagatagacaggaagaaccccgtaatagca
acgtttgaaaatgaaattagccacctgctcggtttcattaggaaagtgcggagagcaccc
tgcgggagcccaggatccatggactacagaaaaggctccagcaccttgtttcgcatttgg
gtcaaatataaacctcgcctgccaacctggtattatcaagaaaagcttcttaatgttgga
gacagccttgttcagataaaacaatacaagctagctctttttcaatgttatggacgctat
ctggaacagttctgttcagaggggatagatgaaatcactgatgtcaaacaatttaaatca
acatttttcccagatggaacagatgataaaaatgcatccttgacgttccacgccttacaa
ggaaggtgcatttgtttatatcagttggtgaagatgagtgatttgaaccttcaaaatcca
gagtcattgaagaaatgtgtcaatatactgtcttttcttcaactcataatgcaggttgtc
ctgccacaggaacagctctgctggctgactttcaatggctcaattcatatttacactata
tgcagacatctaatggtcttaggatattcatcaaaggcacttgagtaccttttgtgggcc
agtgtatgcatggaatcttcagttccacttctatctgtccattacttgacatggagagca
acactgtacactgctgtttgccagtgctattatgactgccaagcaggtgtgcatggagag
gtgtttgcacgccgtgctctcagtaagatcaatgagcttagtcagctcgaaaatatcagc
aattcgtcaggctcagaagaggcgaaaaaagtatttacagaagccactgctaagatggcg
gttatgatcttcaaacgagcggtttttgagtcaagaagaaaaccaaaaggcatgcttcgg
ccaaagcaaaaaagcaatttgaaggatgttgaaaagttaccgtggcctcgaaccagcaca
gaaagactcctggttgagatgtttgataatggcgctgtccagtttttagccatcatagaa
gctctctcagacagtaacagaagagtcttacagggtggacctcctgtacccgatgaacca
gaaatacatgacgtgattgcagagctcttttttgcagggagtgatatagtcgcaggggga
ggcaataaaggacaacgtggatcttgcggtcaaactgaattgcttaaatggctggaacag
gcttcacttctggatttagctttggaagagaaggatgccgtttctgtagaagctgttgtg
aagtttgctaaattagctttcagctatgaacagtgggatgcatttgataccattgtgatg
caagtctatactttcctacaggctcaggataatacaaaatggaaagaagaaaaaatgaat
cttaacatccttattgcagctgaaccattgttgtcagggaaaaagcaaaaacgccatctc
cagagcgaagaaagaagcatgaaaatactaaaaaaatccatctcactggcaatagtgcat
ttaatagatttgcatggggactctacacaagacagagctcaagatgatcatatgacactg
gcagaaactgtgtttgtctctgtttgcagttctttacagggtattcagcctgacagagaa
attatcgttgatgtcatcttgttcctgtggcaaaaatgcaaatttgcactccagagaatc
caagcagctgatggtcccaaattcatccacaaatgtgaagtgaacagcaagtggatatat
attctttgtcttatctatgaagtaatgcagctttgcagtataatagacactgactctgtc
atcatggcggaagctgcattaaaattagctgggattgctgaaggcatcgctgattgcata
atcaaatatgtcaagaaaccagaaaaattgactgaaaaagtgaatgatgaatcagccact
caaggtccatatgctgccaaattaatacagctagagaaaaacccagtcacacaattgact
tttgcatatgaaactgcagaaaaggcaataaaaggaatgagccttgcacgctcacgaggc
tgtacaccagatgagttgtctgtgattgaccattactgtgttacgttgggtgtgaagaga
caacatttaaagaacatggctgtggaacagaacagcccttccaaatcacttgcaaataat
gggatggtaatggatttgcagcttgaactaattatgactcagcaccgcgtgtcagtcaaa
cttctcaatctgttgcaaggtaggcatgaacaaataaaatcattaaaatctccacctaca
agccaaggaaatacagatccttcagttctaccaacagaatgtaacatcattgggaaaatt
aagaaaaacaagctatccaaagccatatttttaatgcagaaggctgtactgtttaacaaa
ggtcttggcagtatttctcctagtcagcttctggaggattcagagaaactcattagaaaa
cttgaagctgaagaaaatgctgtatatttatcctgtgttaaacaagatcggtcattcggg
agtgagaaaaaaagtgtgccacctccacctcttttgatttctagaacggaagattcaatg
gtatttaaaccagctccattcaagtcagatattaaggtatcctggtactgtttgtttgga
agatgtgttacaggtccagatttaaaagtacgactaaaagaccaacacctttatggaaca
ggagaagagattccagcaggcagtggtaatttactggaagttaaaggtttagaagcaaat
gagaaatatatatttgcagtggcagcatattcatctgaaggagttcttattggtgatgca
gttggagaatccaccaaaccaatccttgcctttcctgctctttcagttccaatgacttgg
gcatatcttgcacagagcgcttatcatgttggcaactataacatggcaaagaaagcagtt
tcagttctttggaattactttgttttacaacctgtttctcctcaaactcatatggctgtt
gtttttgcacgtgaccaagattatgtgtcgcagaaaaggttatgtctcgatgtaatatca
aagtcatctcccgtaatgctgcaacatttccttacaagcatttttctattgactgacatc
aacataaaggaaggggggctgttttgtgactgtctctgtaacaatggagtactgaagaag
tggcagatttgtcgaattgctgaatgtgaaagaatgttagtggctcttgatgtcagtacc
tggctgaatgatgccagctatgcccttcaagctgttgttcaatgctatggtctgattgct
ccaataatctatcacaggatcccttctgttcctgttgtgcagatcctaattaaatgcctg
gcagttatacaagaaattccaagcagcacgtggcagaggaagcaggcagctgttactgag
ggagtcctccacatgattgcatgcatagtgtattatgtggcaaaggtacttcgtacatgg
gaagaatacgaattggcaatagctataattgaagacggaaaaaaaattcttgatatttca
gaaaatacttcaatcttttacctatcttcacaaccaaaattaaattaccttgagacagaa
aaagcaaaagatatagttgataaagaaaaggttcagttgatgaggaaatgccagaaaaaa
aagccatcaattgctgaaaaagtgagtgaacagttgtcagcactagaactgcacctgcag
aaactgactaaaccatcagatggagcagatcttacgggacatgaggatccaatgttacta
catgctgtggttgcatgctggccaacagtcgcagcttataaagaagttatgaaatttaag
aagagatctcggttcctggagttttttgtacagcttttgcagagagtcgtgtatgaagaa
aagtttcagcgagcacttgattgggctaatacagtgttggaacacttgaaaaggaggaat
gaaaatgtacttgggataagccgaactgaggctgcggaagatgcaataccaagtgattct
tttaagagatatacagcagcactggtggaatatcacaaggataaggagcatccagcatta
aagaaagaaagaaaacagatcaagcctgagaaacacaaggaaagctttccaacacagatg
agaaagaacacaaagctttctgactcacacagaaacttgggagaagatcttgagaagcaa
gcctttgcaactcttcgaaagctgttgcttccagttgcttgcagatacattaaacataag
aagctcaatactttttgcactgaagagatgccttggagatcccagctgaaccttctactg
gcatatattcacttcaacatgtttagaagtaagctggataagctgtgcagcaatgagtct
ggatgggcccacaactctacaagagttttggatcccgatttatttgctctacatcatgct
ggcattgttgtcatgacaacagaaacaactgttctggatgagcaaatagggagcccaggt
caccttcatccctcacttaaactagatcttacatcaggaaccaaactaagtgattccaat
gatttttctgaaccaagtaccaaaaaaactgaaactgacacccctcgaactcaaatgaca
aatgacacagaggattcctcccatactgtaacagaacaagcccagccgaacatgttatca
gttattctttttgaccacctagggaaaatatatattcatcttaaaagagcagtggtgctt
tcacatcgggctcaacactggacactctttcagaatacctgccgtgttctttggaatctg
accctggaattgcagttactcattaaacaaaatgaggttactaatggaagatttgctttg
aacagtgttctcaacaatgaaatatggctgccattttacctggcagcagactcgattcta
gacatgttagtgatcctccagagcactggcgcagtcaaggttgttgactgcgatgaagca
tttagtgttccaagctgtatgggtgggcctgcatacgaggaaggtggatcaaacctcaca
tttgaataccctcttgatgatgttaatgtcattgatatgcgatggatgcatgatctagtc
cttaaagctattgaacttttgtatcgtgtgcaaagatgggaagcattggttcatctagca
gtacaatttaatttactgactcatgagaggtatacagaacaagttactccattgctggtt
catgcacagaggatgttaattgctagaatacaagaaataaatagtaaatatgtagttggt
cctgaagaaaagataaactgcagagaatatattggaagagatgttcatgttgctgtgagt
tctacaaaaataaaaaatcctggaagcaaagttaattggaaaggacaaactgttctacca
gatggaagagaagtaaaagtgcttgcaagtgtgcctctagatgtcatggatactttagct
tgctttcgagagaccctacagaaatcaaaatattcgagtagagcactcagacacagcagg
aaattactcgctttattacttgctcatgatcaagggttaaatgcaagagaacgagtcagc
agcccttattctgcatttggtaaagtaagtttttctgcaggagctctgaaagcacaccag
cctgtccctccggacctttcagaagaagaatttcattctgtgcactcgattgaaagcaaa
gccctccctccatcctacctttcatttgttataacgtcttatgacaaaacagttgaaatt
ctccattcagacaaccaacaaggtcttaaagcacaggcccttcatgagcttggcaatctt
catatgtttgcaggaaataagagggctgctttcaaatgctggtgtcgggcccttgatgaa
actctcaacatgtctgatacccttaattcatggcaagaactgaatagctccccagacagc
ataagcagtggaagatctaaagattacagtgagaaatttctcagccgagccggcatttgg
ggttgtttgcaggctgctgtcatcactgctaaaatgtctcggtacattctgacatccaat
gtaagaaaaagaacagaatgctgcatactttcagctttactattcaaggccttgcttcta
gcatctatgccacatccaacagagaatcgtgattatgcactatatgaaattggagaggga
tgtgaaatatcagaactgatacctggaatagatctgttttctgatcgatacagggctgat
gtcgctattgttgttggaagcctaagttttgtcatttccgaattacacgctgcttcacag
aatctcatagttttgccattattcacattgtaccaatactttgtttccatgatttgccgt
gaccctgtcagatctgtgaaaggaaggctgcttaagattaatgtcctaacagatctgcat
ctgtttactgaggccttccatgaaatttgcctccttaatcatggaaagcgaattcccagc
agaacaattcaaggcttcaaacaaaatgcaaagcaattgactttccctacattttcatct
tccatgacaatgctctcaagtgaaaacctacaggcaatacaagaagtgcttaacaggaaa
cccagttcatatctacagtctgtttgtgaccaggacactgtgaataaatttgtgctggct
aaaatgcattttattgtcaagttgtctacaacaattaatgcaatacctaaagcagagaat
aaacccagtaattcagtggctgaagactctgttagcagccaagaacttgagactgacata
ccaggaaacaaatccaaagatgttgaagagtcagtctctctttctttgaaacaagatctc
acaccatcagaattaaagggtatattattaaatgaggcagaggaaagactaaacatgatt
cttcagaatttgcaggagaaatatgaatgtcagctttcacagtgttctgcagttgattta
aaaatggcaattgaagcaaaactccaactgtctgagattgttcagcagagacatgaaact
gctttaagtgtggctttggcatattccactatgcttttacttcataaggcaaatattttt
attactaagcccccaaaggatgggaaacatgcatcttcaaaaggcaagcagcacacagca
cttaatttaaaggatgatcaagcatctacaattgtagaaccagaactgcacagtgaagcg
gaagccatacaccttcttgacatacgtttatggcttagatgtcgcctttctctagtcaac
agtcttgtagcacagctccggggtatagctcttaaagaggaagactttttagatagctct
gctatcataacagaaggcatcatggaggctgaatcactaagtgacagcgagacacaagcc
cactttatgctgcagggagcctatcttcatattcaggagggccactccaagaaagctgtg
caaattatgttggagaatataatcactttgctggatgaaaagcagtttatgtctccagcg
gcatgcctaacatttgctcaaagcttgcttctctcagctgacttaatagaaatggagaat
ggcaaagaccagcaattattctgggagaaacagttaaactttttgactttagcccaggaa
atgataattaaacaaatgatatcacttggtgaggctattgagtaccgtgtcacagatcct
atgactatatcacctgtgcagcctctgaaaaatatttatttgccacatatcaatttattg
gccaaaatcaaactgagaattggacatattctgtccataaaagcttctacatcatctggt
atgccaagccttaatatgtataccacagcattggaactttgcagggtatcttcttttcga
gaatatgatctggaagctgagctgcatttccagaaaggcaaagaggagcacaaaatgttt
gagttaggtgaccttgagaaaagctctgccatccagtccttctctgaagctattcacata
agtcagaattatgatcaaaactttagtttaattagaaagtcctatatggaaatagccctc
ttataccttcacctggcaaatatggatgcaaacaggtcagaccctaaagattctccaaca
gtggaagccaaaattgcctctgcaaaaggaaaggtggataaactaatggaagaagatatc
aatgaaaaaatgctgagcctatcagaactctacagtcttttagcatggactgcaataagg
gcggccacacaggtgggcaatgccatgctggcatttaaacagttgattggagtgagcagt
gttagtgcacagagccttaacaccactttgcttgggcagatcccgaaatttgcttgtatg
gaccttcttgcatcttataagaacttcttgtcaggtgaaggtcaaggaatggataaaagt
gcccaaaaagatggaggttttacagataatctccctaaagaaacattgtcctgggttcat
ctgattcgctatcataatcatctgttgaggctaattagcatgattaatatgtctggttcc
tcaacatcactagaggaaaactgtccttcagctgataccttgctctctagtgttttccaa
catggggttacagtgcgctttgcagcaatgcaccagttcctaaagaagaatcttgagtct
tatgccatatgttgtgtaaatgactttccacaagaaattctgattggcaccaagaaatct
ctcatagatttgtgcgtgcttcgtaaaaccatttcagagagtgagaaattacagccagca
acatcatcactgaagataccagccactgtctttatagacaccaaacaagatgtcctgaat
gaacaaatggcaaccaattcattgggggaggagctttgcatacagtggtatttgccatct
ttagaacaattaggaaaaaggaaatttatggtattgctgttgtatgcctacaataaaaag
ggtttgacggtcaaagatcctaaaaaatgtgatccatccagccttttgtgcggccatgta
tggcttcctctttcccacgtttgctcactacaggagaagttgcatgctttaaggcagaag
gcagaatccactcttcagcctgagagagctgcatcagtaacagacagtggagccaagatg
aagcagttaactcaatcagcaaaatctaaaactaacctaaaaactatctctgtccctgag
gaaatacagaaaaatgtcaagcagctttgctttgagatacagcagttgttatgccctgtt
caggatccaaaggcatttactgagactccatttgacatcactctgccatcattaatcaga
ctggagagaatgtttgacccgacacacggctgtatgttaatgaagggctgtctcttagat
tggatcgtttcacagcttacctag
DBGET
integrated database retrieval system
