Xenopus laevis (African clawed frog): 108711178
Help
Entry
108711178 CDS
T01010
Symbol
lamb4.L
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
xla04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108711178 (lamb4.L)
04518 Integrin signaling
108711178 (lamb4.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108711178 (lamb4.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
Rod_CreS
DUF8833
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108711178
NCBI-ProteinID:
XP_018108127
Xenbase:
XB-GENE-6488498
UniProt:
A0A8J0UJ01
LinkDB
All DBs
Position
3L:82259760..82329617
Genome browser
AA seq
1853 aa
AA seq
DB search
MTMLLLVLCFSVSKLQNSGEMFFLQLIYFITALSLVKLEENCENRSCHPVIGDLLLGRSR
QLSASSTCGLDGPQKYCIISYLEDDQKCFQCDSRDPYDPYGNPSSHLIENVITTFEPEWK
NKWWQSENGVDHVSIRLDLETLFQFSHLVLTFKTFRPSAMLVERSRDFGKTWKVFKYFAH
NCATAFPAIPQGHADEVGDVICDTRYSDIEPSTEGEVVLKALDPSFHIEDPYDPFIQDLI
TITNLRINFTKLHTLGDAISNQWQDKIEEKYYYAVYEMIVRGNCFCNGHARQCAPLQNTQ
GDVLSHPDKVHGKCVCQHNTDGVNCEKCKEFYNDTPWAPAVAFKENACRKCNCNGHSEKC
HFDMAVYLANNRNSGGVCDDCQDNTMGNHCELCKPYFYRNPLQDTSDPYACIPCDCDPDG
TQGNGLCQSQTNQRLGTLAGACLCKENVEGIRCDQCNSGYFGLSANDPLGCQYCNCNPFG
SLKFSTCDTVTGECQCQQFATGRYCEECIPGYWGLGNSVHSCTPCNCDIGGALSDLCSQS
NGQCDCRPNLNGRHCNQPKPGHYIIPLDYYFYEAENALLLTKPENIVNVTPMPKCKDYFE
KQGIEFRFENGRIILTNMTKQSLTERTHIKEIFPFSTNGFAEVVLRQPTTGSDITWTGPG
FVRVLSGTGLRFTVNNIPYPMEFVIAIRYEPETLEDWTARIVVNSPKGEASEHCRNSMPL
DGRDLLFLSATSRLALLNTSICLTPEIEYSVDVYLTQESNSDSNSYLLIDSLGLIPKIAS
VKKLCNQAELEEYDNYNCIEMASEMGTEILPDVCERLIVSMSARIHTGAAKCNCNADGSL
SPICSKFGGWCDCKPNVAGRCCDRCAVGSFGFGSAGCKECNCDTKGSVSPLCDQVSGQCV
CRGEIHGRRCDSCLPGYYGFPNCQPCQCNGNSEICDPVSGVCLDCKGFTNGTDCERCLNN
YYGNPTLGHPCRPCMCPDSPNSNQYFAHSCHQDPDSLKMVCNCLSGYTGDNCDSCPPGFY
GNMEEFGGHCLACQCNNNIDRTDPESCDKVTGECLKCLHNTYGANCESCLPGYFGSPLLQ
NCRKCVCNPLGTNVDSCSVYEEIGECVCNKTTGQCPCLRNVIGTSCDKCAYGYWGMSNGS
GCQPCDCYLNNSLGVQCNQFTGQCLCKPKYTGKKCDECEENHYPDAKYQCLPCKCNLEGT
IRPMCDKITGSCNCRPGVTGRYCDQCAPKFKQQFPECPRCHLCFDPWDSEVTSLSEAVHG
LIRLAANIDPKRPSQIGCDIQISILQDKLSIIENFFKSPFISPQYYSQVKSYYDTIRQKV
RKVIISDFEPFNKIPRLNKTITLVEKEVDNLFKELERLKKIKEGEKAIKKQVFLDAFDKI
SKQYSSSVLAGEKLRNVTRITQAAAKTRKHVLTILDNQEGKHKQYSEMLKKMKSLDISKM
NEMVCGTVWDFPCDVAPCGGALCRDKSGKRKCGGPNCNGALPLANDALKSANNTDMKLRN
ISINFLEAEKQINSIRYLAEDTKIKASQLNKTLNKAMGRLEADKMRAKELIKNVKDFLLD
SIPVYPCPRRSLQGGSIPKTPQEVDSTISPVDIENVVNQILAIKLPAAPYDLIDMLSKIK
KYCDSYKENKKSLQNQLEEVQKLNQRAKEARKVAENLPNTDEIWNALKMAEGSQKKTSSV
LKSVNNDLQDIKNKLSEAKAQADLTEDKMKAINDLYTRLETKIAELQDKMLKNRNSAAKA
ENDAKAAMQQAIESEKSLSNLKEKYQLLKEKLKKREIPPEILERLQQLKKEAETLSKEID
NKFQSISDLEEKIDELNKTNQEKANQLIRLEKQAIKLKNDIVTAESTYSTCKA
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgactatgttgttacttgtcttgtgcttttcggtcagcaaactccagaattcaggtgaa
atgttctttttgcagttaatctatttcataacagcactgagtttagtgaaacttgaggaa
aactgtgaaaataggtcatgccaccctgtaattggagatctcttattggggcggagtagg
caactctctgcttcttccacatgtggattggatggacctcagaaatattgcattattagt
tatcttgaggatgatcaaaaatgttttcaatgtgattcaagagacccatatgatccttat
ggcaatcccagtagtcacttaattgagaatgtgataacaacctttgaacctgaatggaaa
aataagtggtggcaatcagaaaatggtgttgatcatgttagtatcagactggacttggag
acattatttcagttcagccaccttgttttgacatttaagacttttcgcccatctgccatg
ttagttgaaagatcaagagattttggaaaaacatggaaggtgtttaagtattttgcccat
aactgtgcaactgctttccctgccataccacaaggccatgcggatgaggtgggagatgtc
atttgtgatacaagatactctgatatagagccatctactgaaggagaggtggttttaaaa
gcattggatcccagctttcacattgaagacccttatgacccatttatccaagatctaatt
actataacaaatcttagaataaattttactaaacttcacacccttggtgatgcaataagc
aatcagtggcaagataaaattgaagagaaatattactacgcagtctatgagatgattgtt
agaggaaactgcttctgcaatggtcatgcacgccagtgtgctcctctacagaatacacaa
ggagatgtgttaagtcatcctgataaggttcatgggaaatgtgtctgtcagcataacaca
gatggcgtgaactgtgaaaaatgtaaagaattttataatgatactccatgggctccagct
gttgcctttaaagaaaacgcctgcaggaagtgtaactgcaatgggcattctgaaaagtgt
cattttgacatggctgtatatctagcaaataacagaaacagtggtggagtatgtgacgac
tgccaagacaacaccatgggaaatcattgtgaactgtgtaaaccatacttttatcggaat
cctctccaagatacatctgacccatatgcttgcatcccctgtgattgtgatccagatgga
acccagggcaatggattatgtcaaagtcaaacaaatcagagacttggaacccttgctggt
gcatgcttgtgcaaggaaaatgtagagggcatccgctgtgaccagtgtaattctggttac
tttgggttgagtgccaacgatccattgggctgtcagtactgcaactgcaatccattcgga
agcctgaagttctcaacctgtgatacagttactggcgaatgtcagtgtcaacaatttgca
acgggaagatactgtgaagaatgtattcctggttactggggacttggcaatagtgtacat
tcctgtacaccgtgcaactgcgatattggtggagcactcagtgacttatgctcccagagt
aatggtcaatgcgactgtcgccctaaccttaatggccgccattgtaatcagccaaaaccg
ggtcactatattataccacttgattactacttctatgaagcagaaaatgcactgcttctc
accaaacccgaaaacatagttaatgtaactccaatgccaaaatgcaaagattattttgaa
aaacaaggaattgaattcaggtttgagaatggcagaataatactaacaaacatgactaag
caaagtttaactgagagaacacacataaaggaaatttttcctttttctacaaatggcttt
gcagaagtggtgcttcgacagcccactactgggagtgatataacttggacagggcctgga
tttgtacgtgttctcagtgggactggattaagatttactgtgaacaacattccataccca
atggaatttgtaattgcgatacgctatgaacctgagactttggaagactggacagccaga
attgtggtaaactcaccaaaaggagaagcaagtgaacactgcagaaatagtatgcctctt
gatggcagagatttgttatttctgagtgctacatccagattagcattgctgaacacctca
atatgtctgaccccagagattgaatattcagtagatgtttatttaacacaggaatcaaat
tctgactcaaatagttatttattaatcgattcgcttggactgatacccaaaattgcttca
gtaaaaaaattgtgcaaccaggcagaattggaggaatatgacaattacaactgcattgaa
atggcatctgaaatgggaacagaaatacttccagatgtgtgtgagaggctcattgtaagc
atgtctgcacgcatacatactggagctgccaaatgcaattgtaatgctgatggttcctta
agccccatctgtagcaagtttggaggttggtgtgactgcaaacctaatgttgctggcagg
tgttgtgacaggtgtgccgtgggcagttttggatttggttccgctggttgtaaagagtgt
aactgtgatactaaaggttcagtaagccccttatgtgatcaagtgtctggtcagtgtgtt
tgtcgaggtgaaatacatggccgccgatgtgacagctgcctacctggatattatggattt
ccaaattgtcagccttgccaatgtaatggcaattccgagatctgtgatccagtttctgga
gtctgtctagattgcaaaggatttaccaatggaacagactgtgaaaggtgtctgaacaat
tactatggcaatcctactctgggacatccttgtcgcccatgtatgtgtccagattctcct
aatagtaaccagtattttgcacattcctgccaccaagaccctgatagtttgaaaatggtg
tgtaattgcctgagtggctacacaggagacaactgtgattcttgtccccctggattttat
ggtaatatggaagaatttggagggcactgtttagcctgtcagtgtaacaacaatattgat
agaactgatcctgaatcctgtgataaagttactggagagtgtttaaaatgtttacacaac
acttatggagcaaactgtgagtcatgtttacctggttactttggctctcccctgcttcag
aactgtagaaaatgtgtatgtaatcctctggggaccaatgtagacagctgttcagtatat
gaggagattggagaatgtgtatgtaacaagactacaggtcaatgcccatgcttgcgtaat
gtgattggaacaagctgtgacaagtgtgcatatgggtactgggggatgtccaatggaagt
ggatgtcaaccttgtgattgttacttaaacaactcacttggagttcagtgcaatcagttt
acaggtcaatgtttatgcaagccaaaatatacagggaaaaaatgtgatgaatgtgaagaa
aatcactatccagatgccaaataccagtgcttaccttgcaagtgtaacttggagggtacc
atcaggccaatgtgtgataaaatcactggttcatgcaattgtaggcctggagtcactgga
agatactgtgaccagtgtgctcctaaattcaagcaacagtttccagagtgtccccgatgt
catttgtgctttgacccatgggactctgaagtaacatctctgtctgaagctgtccatggc
cttattcgacttgctgcaaatatagaccccaagagaccttcccaaattggttgtgatata
caaataagcatacttcaagataaactttctatcatagagaatttttttaagagtcccttt
atctcacctcaatattactcacaggtgaaaagttattacgacaccattcgacaaaaggtt
aggaaagtcataatttctgactttgaaccattcaacaagattcccaggcttaataaaact
ataactttggtggaaaaagaggttgacaatttatttaaagagctagaaagattaaagaag
attaaagagggagaaaaggcaatcaagaaacaagttttcttagatgcttttgacaagatc
agcaaacagtattcatcatcagttttggctggggagaaattgcgcaatgttacccgcatc
acccaggcagctgccaaaactagaaagcatgttcttaccatattagataaccaagaagga
aaacacaaacaatattcagaaatgttaaagaaaatgaaatctctggatataagcaaaatg
aatgaaatggtttgtggaacagtttgggactttccctgtgatgttgcaccttgtggggga
gcactatgtcgggacaagtcaggaaagagaaaatgtggtgggccaaactgcaatggcgct
ttgcctctagccaacgatgcactgaaatcggcaaataatacagatatgaagctacgaaat
atatcaattaatttccttgaggctgagaaacagattaacagtatcagatatctagcagaa
gatacaaagataaaagcatcacaactgaataaaacactaaacaaagccatgggtcgtttg
gaagcagataaaatgcgggcaaaggaactaattaaaaatgttaaagattttctgttagac
agcatacctgtgtacccttgccccagaaggagtctacagggaggaagtatccctaagaca
ccacaggaagtagattctacaatatctcctgtagatatagaaaacgttgttaaccaaata
cttgccattaagctgcctgcggcaccatatgatttgattgacatgctaagcaagatcaag
aaatattgtgatagctacaaggaaaataagaagagtttgcaaaaccaactcgaagaggtt
caaaaacttaaccaaagagcaaaggaagctagaaaggtagctgaaaatctcccaaacaca
gatgagatctggaatgctttgaaaatggctgaaggctctcagaaaaaaacatcttctgtt
ctcaaaagtgtgaataatgatcttcaggatattaaaaataagctttcagaggctaaagcc
caggcggatttgacagaagataaaatgaaggctataaacgatctttatactcggctcgaa
acaaagatagcagagctacaggataagatgctgaaaaacagaaacagtgctgcaaaagca
gaaaatgatgccaaggctgcaatgcagcaagcgatagaaagtgaaaagagtctcagtaat
cttaaagagaaatatcaacttctcaaagaaaagctgaagaaaagagaaatcccaccagaa
atattagaaagactgcaacagttgaaaaaagaggctgaaactctatctaaagaaattgat
aacaaatttcaaagtatatcagacttggaagagaagattgatgaactgaacaaaacaaat
caagaaaaggctaatcaattaataaggctagagaagcaagccataaagcttaaaaatgac
attgttactgcagagagtacatattctacttgtaaagcttaa
DBGET
integrated database retrieval system
